Basic Information

Insect: Sogatella furcifera
Gene Symbol: -
Assembly: GCA_014356515.1
Location: Scaffold57:11033-26642[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0018 0.094 13.4 1.5 1 23 185 209 185 209 0.94

2 8 0.00088 0.045 14.4 1.3 1 19 215 235 215 240 0.92

3 8 0.00013 0.0065 17.1 1.0 2 23 289 310 288 310 0.93

4 8 0.00019 0.0096 16.5 1.1 1 23 316 338 316 338 0.99

5 8 2.6 1.3e+02 3.5 1.1 1 23 341 366 341 366 0.90

6 8 0.017 0.9 10.3 0.5 2 23 371 393 370 393 0.88

7 8 0.00015 0.0079 16.8 0.2 3 23 404 427 402 427 0.91

8 8 0.024 1.2 9.9 2.8 1 23 432 456 432 456 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0018	0.094	13.4	1.5	1	23	185	209	185	209	0.94
2	8	0.00088	0.045	14.4	1.3	1	19	215	235	215	240	0.92
3	8	0.00013	0.0065	17.1	1.0	2	23	289	310	288	310	0.93
4	8	0.00019	0.0096	16.5	1.1	1	23	316	338	316	338	0.99
5	8	2.6	1.3e+02	3.5	1.1	1	23	341	366	341	366	0.90
6	8	0.017	0.9	10.3	0.5	2	23	371	393	370	393	0.88
7	8	0.00015	0.0079	16.8	0.2	3	23	404	427	402	427	0.91
8	8	0.024	1.2	9.9	2.8	1	23	432	456	432	456	0.96

Sequence Information

Coding Sequence: ATGATTACGAAATTTTTCAATTATTATTTTATTGGAATAGATTTTTGTTTGATTATTGACGAAGAAAGTTCTTTGAAAATCAAATTAGGATCATCAAATTTAGGCCTATTCATTTCAATGGATGCAATTAGTAAATCTAGTTCCTCATCCTGTGAATTGTCTGATGACAACTCGTCTACCTGTCTAGATCCTGACTCCACTGGAAATGCTTATCAAGCTTCTTCCAAATCTGAACTCATGTTCAGAGTAGATTTTCCAAATGACTTTGATCGACCGAAAAATGAAGAAACTGTGTATGGGCCTATGCCTATTATGAAAAGTGAAGAAGCTTCATACAATAGTATGGAAACTTCAAATAACACTACACCTGATGAAAGCGTTGGTCTTGTATCTGATTTTGAACCAACAACTTTACTCGACGAAATTGAGATGGAAGATGACCCTTTAAAAATTGACTCTGAGGAAGAGAATAATGAAGATTCGTTACCAACTCAACCAGGCTCATCGAAAAAAAGAACTAAAAGTAAAGGAAAGCAGCCGATTGAAAAAACATTTGCATGTGATTACCCAGGATGTAATGCCTCTTTCTCACGGCCTTGGAAATTGTCAGCACATCACTGTAGGCATACTGGCGAAAGACCGTTCATGTGCTCAAGAGTTGGATGCACAAAGAGCTACACCAACCCGACCCATTTGCGTAGACACGATCTCAAGGTTCACGGAGCTAAAGATGATAAAACCGATACTAGACGATATAAGTGCACTCATCCAAATTGCTGGCTTGTTGATCATCCAGGGTTCTGCACTGTACCCGGACTGAGAAAGCACGAACAGAGACATGAGGTTCTTGATAAAAATGGACTTGTTTGCTCCGATTGCAATATGACATTCACAAGACTAAATGAGCTGAAAACTCACAGATTCGAGCATGATAATGTTTTACCTTTTAAATGTGATTACTGTGGAAGAGCGTATCTTTATAATTTGGAGTTGAGGAAACATCTTCGAATGCATAAAAGGTACAAGTGTCAAGTTGCCGGCTGCGAATCTTTAGAATTCGACTCTTTCAAAGAACTTCAAAAGCATAAACACATCCATAACAAGCAAATAGTTTGCGAGCTGTGTGGAAAGGAGTTTGCGATGAAATGCCGGCTGAGGGTGCACTTTGAAGAGGTGCACTCATGCGAGCCGGGCGCCACCCAGTGGCCCTGCTCTGTGCCCGGCTGTCCTCGCGTATTCACCCGCAGGAGGAACATGCAGCAACACGTGCGTCAAAAGCACCAAGGCCCCGGCCACGTCTGTCCATTTCAAGGATGTCATTTGCGATTCGTGTGGAAGCAAAGTCTCACCAAGCACATGCAACTCCACTTGATGGAGACGGAAACTGAAACGCCTCCTGTACAACCTGAACAAAAAGAGAAAGGACCTCGCGCTAGAAGAAAGGATGCTGACAAACCAAAATCGGCCACTGCTGAAATTCTTTCTGATGTGATTGTTGATAGTCAAACAAAGGATCAACTTATAAATAAGGAAGAATTTGATACTGATGAAGAAATTATCTACCAACTGACTGAATCTCCACCGCTGAGCCGTTCTAGTACTGCTGACTTGGACAGCAAACTACACAGAGGAAACTCCTAA
Protein Sequence: MITKFFNYYFIGIDFCLIIDEESSLKIKLGSSNLGLFISMDAISKSSSSSCELSDDNSSTCLDPDSTGNAYQASSKSELMFRVDFPNDFDRPKNEETVYGPMPIMKSEEASYNSMETSNNTTPDESVGLVSDFEPTTLLDEIEMEDDPLKIDSEEENNEDSLPTQPGSSKKRTKSKGKQPIEKTFACDYPGCNASFSRPWKLSAHHCRHTGERPFMCSRVGCTKSYTNPTHLRRHDLKVHGAKDDKTDTRRYKCTHPNCWLVDHPGFCTVPGLRKHEQRHEVLDKNGLVCSDCNMTFTRLNELKTHRFEHDNVLPFKCDYCGRAYLYNLELRKHLRMHKRYKCQVAGCESLEFDSFKELQKHKHIHNKQIVCELCGKEFAMKCRLRVHFEEVHSCEPGATQWPCSVPGCPRVFTRRRNMQQHVRQKHQGPGHVCPFQGCHLRFVWKQSLTKHMQLHLMETETETPPVQPEQKEKGPRARRKDADKPKSATAEILSDVIVDSQTKDQLINKEEFDTDEEIIYQLTESPPLSRSSTADLDSKLHRGNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01354156;
90% Identity: -
80% Identity: -