Basic Information

Insect: Sogatella furcifera
Gene Symbol: -
Assembly: GCA_014356515.1
Location: chrX:6443614-6472569[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.028 1.4 9.7 0.3 3 23 64 85 62 85 0.94

2 17 3.4 1.8e+02 3.1 1.0 1 23 88 111 88 111 0.92

3 17 1.1 56 4.7 2.6 1 23 114 137 114 137 0.97

4 17 0.72 37 5.3 1.1 2 23 788 810 787 810 0.94

5 17 6.5 3.4e+02 2.2 4.3 1 23 854 877 854 877 0.94

6 17 0.0016 0.081 13.6 1.0 1 23 888 911 888 911 0.98

7 17 0.008 0.41 11.4 0.7 1 23 917 940 917 940 0.96

8 17 0.21 11 6.9 4.0 1 23 945 968 945 968 0.97

9 17 0.52 27 5.7 3.3 1 19 976 994 976 999 0.85

10 17 0.00032 0.016 15.8 1.7 1 23 1005 1027 1005 1027 0.99

11 17 7.9e-06 0.00041 20.9 3.7 1 23 1034 1056 1034 1056 0.98

12 17 3.2e-07 1.6e-05 25.3 4.0 1 23 1061 1083 1061 1083 0.98

13 17 0.046 2.4 9.0 2.9 1 23 1089 1111 1089 1111 0.94

14 17 0.059 3.1 8.7 5.1 3 23 1119 1145 1118 1145 0.94

15 17 4.3e-05 0.0022 18.6 0.5 2 23 1150 1172 1149 1172 0.94

16 17 0.0073 0.38 11.5 1.2 1 23 1177 1199 1177 1199 0.98

17 17 0.00075 0.039 14.6 0.3 2 23 1206 1228 1205 1228 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.028	1.4	9.7	0.3	3	23	64	85	62	85	0.94
2	17	3.4	1.8e+02	3.1	1.0	1	23	88	111	88	111	0.92
3	17	1.1	56	4.7	2.6	1	23	114	137	114	137	0.97
4	17	0.72	37	5.3	1.1	2	23	788	810	787	810	0.94
5	17	6.5	3.4e+02	2.2	4.3	1	23	854	877	854	877	0.94
6	17	0.0016	0.081	13.6	1.0	1	23	888	911	888	911	0.98
7	17	0.008	0.41	11.4	0.7	1	23	917	940	917	940	0.96
8	17	0.21	11	6.9	4.0	1	23	945	968	945	968	0.97
9	17	0.52	27	5.7	3.3	1	19	976	994	976	999	0.85
10	17	0.00032	0.016	15.8	1.7	1	23	1005	1027	1005	1027	0.99
11	17	7.9e-06	0.00041	20.9	3.7	1	23	1034	1056	1034	1056	0.98
12	17	3.2e-07	1.6e-05	25.3	4.0	1	23	1061	1083	1061	1083	0.98
13	17	0.046	2.4	9.0	2.9	1	23	1089	1111	1089	1111	0.94
14	17	0.059	3.1	8.7	5.1	3	23	1119	1145	1118	1145	0.94
15	17	4.3e-05	0.0022	18.6	0.5	2	23	1150	1172	1149	1172	0.94
16	17	0.0073	0.38	11.5	1.2	1	23	1177	1199	1177	1199	0.98
17	17	0.00075	0.039	14.6	0.3	2	23	1206	1228	1205	1228	0.94

Sequence Information

Coding Sequence: ATGATCAAAGAAGATGATGAAAATGAAGACCCATTGTTGGTGAATGCTTGCCTGATGGTAGAGGAAACCAATGATTTATTTGAGAGCAATTCGAGTAATAATCTGTTTAAATGTGAGCTGTGCCCTCAATTCATGCAATCCCCAGAACTGCGTTCCCTACATTATGTATTGAATCATGGCTGTAGTATATGTAGTGTGTGCTCTCAGGTTTTCATGACTCTGAACTCGTTCAAAATCCACGTCAGGGCAAATCATTCTCATTTTCTGTGCGATTTGTGTGAGATTGTCTTCCTGACACACGGCGAAATGTTGAAGCATAGAAATAATTTCCACAAATTCTTCAAGTGTCCATTATGTATATTTGAATTCTTCAGTGAAAGCCATGTGAATTCTCACCTTTCAAAATTTCATCGAATCTCTGCGACCAACTTCTCGTTATTCAACAATTATGTTGCCGAATGGAGTGAAGTGAATCAAACATACCATTGTAACATGTGTGGAGCAAAAAAGTGCAAGGTTGACGTTTTTTCTCATTTTTTATTCCATCATCAAATTTCGTTGTTACCATTAGCACAGAAATTCATGTCTCAGAATCTCAACATAAGAGTAACTGGTGTGGATTCTGAAATTGACTGTCAATCTACTCTAAATGTTGCCATCTGCAAAGGCTGCTCAGGAAAGGTATCAGAGGATGTACCACTGTCTGCTCATAAGTTTATTTGCCTTGGAAATGTAATGTGTAAAATATGTCTGCAACCGCAAAGTAATCAGATTAGTCGAGACGCCCACATCAAAAAAGAACACAAGAATTATCCATGTGCTCTAGGTTGCTCTAACAGAACTGTATTTGACACTGAAGAAAAACTTTATGAACATTGTCTTGTAGTTCATGATGTCAAGCCTTGTTGTCTCTGTTCTTCTTATATCAGATGTGCTGACGGACTGATGAAGCAGCATCTTGAAACGTGCCATTCATATTACCGTTCAGATGAAATTCTTTCCAGCGACTCTATATTCAATGTGCATTGTGGAAATTTGACCATTGGCTTGATATGCAGCCTATGCGACTTTGACGCCTTGATACAAATCAGTAGTATTGATGATCTATTCAAACATCTCAACTATCACTCAGTTTCCCTCAGAGCGGCTTTCCATTTTCTTGAGAAGGATAACTTGAATCAAAGTGTGTGTATGAAATTGAACCAGATAAGGTATACTCAGAAAGCAATAATACAAACTAAATGTTCCGATCAGAATGTAGATGAATTCTACCAACTGCCATATTCAGACAACAAATATTCAACTGCGAGTAATGCACATGATCCACAGCAAATTTTTAGTCAAATAGACCATCCCATGAAAGCTTTTTTGGGTGATATACTAATTCCAAAGCTTGTAACTAATGGGAACATTGAGTCATCCTTATTTCATGAAGCAAATAGAACCGACATACGGAATGTTGAATATACTGTAAATGGTTGTGAGAGCAATAATATACTACACAAAGATAAACTTGCAATGGGAAACATGTTCCCGGGTACAAGTAGTTCAGAAAACAAAGAAAGATTTGAAGATTCGACTCCAAGACCTGAATCCATACCCAAATGCTCAGAATCAAATATGAAAAATGAATATAATTCACCTGAATTTGAAGAAAGAGGAACTTTTTATGAGAATGATAGCCGCAATGGAGTTATTGACAACTGCATTATTGATAGGAATGACGGATTTGTTGACAGTGCTGTTGAGAACTTAATAAATGATAATGTAAACAATAAACATGTAGGTTCCTGTGATGAGAATGAGAATTCCCAAAATGCTAGCAATTCCAACGAAATTTTTGATAACAGCAGTGTATTAGATGGGAAAGTTGAAGAGTTGTCTGGTATTCAACAAAACAATATCGAAAAAGAGGAAGAATATGATTGCACCAATTCGGCGGCTTTGAAGAAAGAAGGAAAGTCGATCAAATTACTTATAGATTTTTTCAATCTAAACTCAATCGCTGATCCACGCAAAATTGAATGCGTTGTAACCGATACAAGTGATATTGAGGATTCTGATTATGAAATGGAGGAGATGCAATCGAGTTCTTCCACTAGGGCGAAGTCGAAGAGGCGCAAAAAGAGTACAGAACCAAAGAGTCTTCATGGACTGAATCGTATTGTCGTCACCACCAATGGTTTCAAATGCGAATTGTGTTGCGGTAAATTCAAACAGGATGAAGGAATGAGAGAGCTCGTGAAACATATGAGAAGCTTGCATGGCTTCAAATGCAATTTCAATGGTGCGAAACTAGCTGAAGCTTTCAAACACAAACGAGGTGCGGCTGGATCGGCCATGAATATGCAACCAGGTCTGGTTTGTCCCAAATGTTCAACTGGATGGAATTCAAAGCGACTATTAAGAAAGCATTTTACAACTAAACATGGTATGAAGTCTCTGGACAAATCGAAGTCAGAGCGACTATTTTATAAATGTCGATTTTGTGAACAATCATTTTGGAAAGCCAGCGAATGCTTCACCCATGAAAAAGACAATCACTCTGATCAGGAAGAGTTTAGATGTCACCTCTGTGATTATTCCCATTTTCGGAAAGTGATTCTCAACAGACATTTGAAACTTGCTCATCGTTCGGACCTACTACACTCGCATGTTTCGTTCAAATGCAATGAATGTTGGAGACTGTACCCAACATATCAGCTGTTGAATAAACATGTGCGCTCAAATCATCCCAATTGCATTATGTACCGATGTCGGTATTGTCAAAAAGTATTGAAAAGCATGAGAGGTTTGGTTAAACATGTTGAAAAAGGACATGATACCACGCGCTATTCATGTAACCATTGTGGTCTTAAACTGCGTAACAAACGTGCTCATAATGCTCACGTGAGAATGAAGCACATTTCAAGAACGAAATGCACCTACAAATGCCGCCTGTGCGAAAGGACTTTCGACTCAAAAGAACTAAGGAATTCGCATTGCGAAACAGATCATGCCAAACAGAAATTATTTAAGTGTGGAGAATGCGGAAAAGAGTCACGCTCAAAATCAGCATTTTATAGTCACAAGCAAACGCACTCAATGTCTATCGACGCCTTCAAGTGTGAACATTGTGAGAAAACGTTTTCTAGACGAGATAGCTTCAACGAGCACCAGCTAATACATGGAACCAAACGGCACAAGTGTTCTCATTGTCCTAAAGAATTTGTTCAGCGATCGAACTTGGTTCGTCATATGAGGATTCATACGGGCGACAAACCATTCCCGTGCTCGTTCTGTGATAAAAAGTTTAGTGATAAGACAGCATGTGATACGCACGTGAAAATTCACACACGAGAAGGATTCAATTCATGCCCATACTGTGATAAAAAGTTCCTCAGGAAACAGACTTTCACCAATAAATATCAGTTGCAAACCCACATTGCAAGACACAAGAAGCAGGTGAAGTGCGATGAATGTGGACGATTTTTCATCAACACAAGTTTTCTCCAGCGCCACATGGAGGCTTTTCATCCGACTCATGTCTATTCTTGTCAATTATGCACAAAAACCTACACCAAAGAAGCGGAAGCAAGGAAGCATCTGACATCCCATGCCAGCTACAAAACTCTGGAGTGCCCGCTCTGTAAGAAAAGTTACACCACAGTGCAAACCCTCAAGATTCATCTGACTGTCATGCATAAGCTGGGCAAGGACCATCCTGATTTCAAAACGACTGTGGACAAGATATCGGTGGAGTATGAAAAATTGATCTCAGATCAGAAAGAAAAAGACTTCAATTCTCTTATGGTTTGTGTTCCTATTAGTGAAACGAAAACAGTCGATAAGACCAAGAAGAAAGGAGACAGGAAGCGTAAACAAAATGATACATCCGCTAAAAAGAACAAAAAATCCCCGAAAAAAACAAATGCAACTCAAACTAGTGAAAGTGAGTCTAACATCGGGGAAAGGGTGCTTAGGCATCAAAGAAAGTCTAGGCCGAAAAGTTTTGTTGAGTTGGATGCCGAGGACGATTCCAGCGATGGAAGTAAACTAAATCTTTCTGCGTCTTCCACTGATACCCAGGAGACTCCTGAAAAGAAAATGAGTAAACGCTCCAAGGTTACCAAACCTGAAGCCAAAAAACAAACAAATGGGAAACGCCCCAAAAAACAATAA
Protein Sequence: MIKEDDENEDPLLVNACLMVEETNDLFESNSSNNLFKCELCPQFMQSPELRSLHYVLNHGCSICSVCSQVFMTLNSFKIHVRANHSHFLCDLCEIVFLTHGEMLKHRNNFHKFFKCPLCIFEFFSESHVNSHLSKFHRISATNFSLFNNYVAEWSEVNQTYHCNMCGAKKCKVDVFSHFLFHHQISLLPLAQKFMSQNLNIRVTGVDSEIDCQSTLNVAICKGCSGKVSEDVPLSAHKFICLGNVMCKICLQPQSNQISRDAHIKKEHKNYPCALGCSNRTVFDTEEKLYEHCLVVHDVKPCCLCSSYIRCADGLMKQHLETCHSYYRSDEILSSDSIFNVHCGNLTIGLICSLCDFDALIQISSIDDLFKHLNYHSVSLRAAFHFLEKDNLNQSVCMKLNQIRYTQKAIIQTKCSDQNVDEFYQLPYSDNKYSTASNAHDPQQIFSQIDHPMKAFLGDILIPKLVTNGNIESSLFHEANRTDIRNVEYTVNGCESNNILHKDKLAMGNMFPGTSSSENKERFEDSTPRPESIPKCSESNMKNEYNSPEFEERGTFYENDSRNGVIDNCIIDRNDGFVDSAVENLINDNVNNKHVGSCDENENSQNASNSNEIFDNSSVLDGKVEELSGIQQNNIEKEEEYDCTNSAALKKEGKSIKLLIDFFNLNSIADPRKIECVVTDTSDIEDSDYEMEEMQSSSSTRAKSKRRKKSTEPKSLHGLNRIVVTTNGFKCELCCGKFKQDEGMRELVKHMRSLHGFKCNFNGAKLAEAFKHKRGAAGSAMNMQPGLVCPKCSTGWNSKRLLRKHFTTKHGMKSLDKSKSERLFYKCRFCEQSFWKASECFTHEKDNHSDQEEFRCHLCDYSHFRKVILNRHLKLAHRSDLLHSHVSFKCNECWRLYPTYQLLNKHVRSNHPNCIMYRCRYCQKVLKSMRGLVKHVEKGHDTTRYSCNHCGLKLRNKRAHNAHVRMKHISRTKCTYKCRLCERTFDSKELRNSHCETDHAKQKLFKCGECGKESRSKSAFYSHKQTHSMSIDAFKCEHCEKTFSRRDSFNEHQLIHGTKRHKCSHCPKEFVQRSNLVRHMRIHTGDKPFPCSFCDKKFSDKTACDTHVKIHTREGFNSCPYCDKKFLRKQTFTNKYQLQTHIARHKKQVKCDECGRFFINTSFLQRHMEAFHPTHVYSCQLCTKTYTKEAEARKHLTSHASYKTLECPLCKKSYTTVQTLKIHLTVMHKLGKDHPDFKTTVDKISVEYEKLISDQKEKDFNSLMVCVPISETKTVDKTKKKGDRKRKQNDTSAKKNKKSPKKTNATQTSESESNIGERVLRHQRKSRPKSFVELDAEDDSSDGSKLNLSASSTDTQETPEKKMSKRSKVTKPEAKKQTNGKRPKKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -