Sfur000713.1
Basic Information
- Insect
- Sogatella furcifera
- Gene Symbol
- -
- Assembly
- GCA_014356515.1
- Location
- chr8:28958922-28986225[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.053 2.8 8.8 0.1 2 23 1199 1221 1198 1221 0.96 2 14 3.1 1.6e+02 3.3 0.1 5 21 1228 1244 1226 1245 0.90 3 14 0.087 4.5 8.2 1.4 1 23 1329 1351 1329 1351 0.96 4 14 0.00017 0.0086 16.7 0.6 1 23 1355 1377 1355 1377 0.98 5 14 0.0019 0.099 13.4 1.4 1 23 1387 1409 1387 1409 0.97 6 14 0.00066 0.034 14.8 0.1 1 23 1416 1438 1416 1438 0.98 7 14 7.4e-05 0.0038 17.8 2.8 2 23 1442 1464 1442 1464 0.93 8 14 0.00084 0.044 14.5 1.9 1 23 1505 1527 1505 1527 0.98 9 14 0.097 5 8.0 1.3 1 23 1553 1575 1553 1575 0.96 10 14 0.00058 0.03 15.0 1.8 1 23 1581 1603 1581 1603 0.96 11 14 2 1.1e+02 3.8 0.4 3 23 1876 1897 1875 1897 0.93 12 14 0.00041 0.021 15.5 0.9 1 23 1905 1927 1905 1927 0.98 13 14 1.3e-05 0.00069 20.1 0.2 1 23 1933 1955 1933 1955 0.99 14 14 3.5e-05 0.0018 18.9 0.2 1 23 1981 2003 1981 2003 0.98
Sequence Information
- Coding Sequence
- ATGGATGAGATGGATTTTAATTTCGTGGACGTCTCCAAACAGTCGGAGGCTGATGGTAACGATGATGATGACGACCGAGATCATTTTGATGAGAGCAATGCTATGGCCGTTGATCCACTGAGTGGCACTGATAACCCACTGAGCAACGAGAATCCTGAAATAAAAGGAGAATATGATAATGAGCTGATTTTGAAATGTGAACCAATAGATTATGACAATGAAGACGTGGAAGATGCAAGAGACGAATCTCAATCCAATGATGGAACGGCAATTTTACCTGGCAATGAAGATTCCCGATCACCTGTCAATGAAGAGCCGGAATATTCAATTTTCATCAAAAATGAACCACCTGACCTGGACCCGACACCTGCTGAAGAGTCTCAGCCTAAAGGAAGCAGTCCTGCCAACATCAAAGTTAAACGGGATTTATTCTCTGAAGATTCAAGTGGGGGTAAAGGTAGCCAGGATTCAAGTGCGATGAACCAAAAAGTGTTGAAAAGTTCTTCTGTATCACAACCAAGTGCGTTACAAAGCTCTTCTGTTGCACATACAAACGTGGTACAAAGTTTGTCTGTGGCACAGTCCAGTACAGGAAATAGTTCAAGTGTTGTAGTACAAAGTTCAACTGTAGCACAGCCAAATGTTGTGCAAAGTGTATCGGCGGTACAACCTAGTGTTGTGCAAAATGTTGTACAACCAAATTTGATACAAAGTACGCCTCTGACACAGACTAACACAGTTTCTGCGCTGTCCCAAAACAATGGACTAAATCTACTGCAGAATAGTTTGCTGCAGCCGAATAATGTTATCTATGTTGTACCCAGTAATATTCCCGGACAGCCTTATCAGTTTATCATGGGTAATGCTCAGACTATGAGTCAGTATGGAAGTCAAGCCATAGGTATCATTCCACTGCCAAACTCAGCAATTGGCCAGTTGGCAAACACTGCCATGCAGCCGCAACCAATGGTGAATGGTAATATTCAACAAATGCCTGGTGGTACAATTCAACATGTGCCCGGTGGTACACTCCAGCAAGTCCCCGGTGGTACACTTCAGCAAGTCCCCGGTGGTACCATACAGCAAATGCCAAATGGCACGTTTCAGCAGATGCCAAATGGTAGCATTCAACAGATGACTGGAGGTACTATCCAGCAAATACCTAATGGAACATTTCAACAAGTTCCAGGTGGTACCATACAACAATTGCCAAATGGAACATTTCAGCAAGTGCCAGCTGGTACTATTCAACAGCTACCCAATGGAACATTTCAACAAGTACCAGCCGGTACCATACAGCAAATGCCAGATGGCACGTTTCAACAAATTGGAGTTGGTACCATTCAGCAGCTGCCAAACGTTCAACAAGTCTCTAGCAGCACTACTGCACCAAACCAAAGTGATGCAATTCAACAAGTAGCCAGTGGTACAATTCAACAAATTCAGACTGGTTCAGTTCAAGTAGCTGCTAGTAAAACTCATCCTACTAATGGGAGTATTCAGCAAATCCAGAGTGGAACAGTTCAACAGATTCAGAGTGGTACAATACAACAAGTAGCTGGAGGTACAATTCAACAAATACAATCTGGAACAATTCAGCAATTCTCCAATGGAACAATTCAACAGTTGTCAACTGGTACAATACAGCAGATATCAGGTGGCACAATTCAACAGGTTACAAATGGTACAATTCCACAGATGGCCCAAAGTATGCCCATCACAAATGGACTAATTACTCCAACAGCACAAAACATGTCTTTTTCAAATAATTTTGCAAATCAAATGGGAGCAACAAACATGTTGCCTCAGAATATACCTGTGTCAGGCTCGTTTTTGCCACAATTAACGCCAAATATGCAGCTTCCAAACAGTTACATATTGCAAACAAATCAACCAAATTTGCAGATTCCAAGTTCTGTGCAAACAACTCAAGCTACTGCAAATTCCATACCAGTACAAGCAACTCAAGCTACTACAAACACTAAACCAGTGCTAACAGTAGCATCCAGTGCAAATAGTACACAAAGAAGCCAGCAGAAGACCATCCAGACAACAAAACCTCTGTTGCCAAAAGTTACTCAAGCTACACCAAATACAGTTGTCACACAAAATCAGCAGAAGTTGAAGGTACCTGTACCAGCGCCTGCACAATCAACTAGTAAAACACTAACTAGGAGAGCTACTACAGCTTCACAACTACAAAGCATTACTTCATTGAAACCAGAAGTGATGCAAACTGTCAAGGTGGTTACCAAACGCATCGGAAATGAGACAGAAACTACTATCATTGCCATTAAACGGAGAAAAAAGAAAGGTAGATATACTATCCTTAAACTGCGTAAACTTCCATCATCTGAACCAGATTCTGAGACTGTTGATGCTCCAACTATTTCTACTCCTGTAACAGTGAAGAATTCTGCAGCAAAACCATGTCTGAAACCACTACTTCCCAAGGAACCACTTCTGCCTATCCCAGTATCATCCATTATGGAAATTATCAATTCTCAATCAAACCCGCAAACCATCACTACCACAGTGCCTCTAACTTCACAAAGTGCAACAAGTAGCGCGACTGTATTGTCCCAAGAAACACAGAATCTTATTTTGCCTGACAATGTACTGCCTCAGAATATCTCAAACAATCTATTACCACAGACTGTTACAAGTATACTCCCAGAAACATCTCAACAAACAATAACTCTGGCTGGTAATGTGATACCACAAACCAGTAGTATTATTCCTCTAGCAGGTCAAAACTCAGTACCCCAGGTTAGTAATGTCATTTCTCTCAGTTCTCCAAATATTTTAACCACAGAATTGACACAACCTGTGTCAACCAGCTCATTACAAAAACCAGCAGAAGAAAGCTCCAAGTTACTACAAAAAGATTCAGCGAAAAAAGGAATCACAAAGAATATACCAATTGCACCAAAAACACCTCTCAATGACAGCGATGAAGAGGAAGAAAAACCTGAACCGAAATACCTCACCAGAAGTGCTAAGAGAGAACTGGAGAATCTGAACAAAAATAGTGAGAATAACTCTTCATCTTATCCCGCCTCCACAGTATCAACGAAACCAGTTTCCATATTACCATTGACTTCATCGAAACTTGTTCCCATTTTACCAACTGGTTCAAATTCAACTAAACTGGTTCCAATATTGCCTGCCCCAGTAGCAGATCAATCAATAACATCTTTGAATGAAACTGGTGATAAAGATGGTGAAAAAATGGCCGTGGATGAAGTTGAACACGAACAAGTTGGAGATAATCAGGAGATAGTGATTAAAAAAGAGTTGGAGGATGAGAACAGTAATTCTGTGGATCCAAATGTGAGTGATGGACTGAATAAAACTGAGCAGAATGTGAGTGATGGTTTGAACAAAACTACTATCAAAGCGGAACCAAATGTGAGTGAGGGGTTGAATGTAGAACAGAATGTGAGTGATGTGTTGAACAAAACTATTAATGTGGAACCAATAGTAAGTGATGGATTGAACCAAACTATCAATCAAACATTGATCATAACTTCTCCTCTCGACCAGTTCCCTCGTATCCTGCCAAAGCCCACTGCTGCCAGTAGCGAACTCCTCAAATGCCCCAAATGCTGGGCTGAACTAGACAACCAGGCAGACCTGGAAATGCACAAACGCATATATCACAACAAACGATATCCCTGTGTTTGCGGCAAAGGGTTTGAGAGTATGATAGGACTGAAAATACACAGACACACCTGTCTCAAGGTGAAAAACCCTTGTGAAACAAACGCCACACTCACCGGAGAGTATTTCATTACAAATGGTAAGAAAGATAGTAGTGTTCTAGGAGAGGATAATGTAGAGATGAAAGAAGAGGTGGATGAAGATGAGATGAAAATAGTTAGAGTGGACAAGGAGAAATGGAGAAAATGTTCACATTGTAAGTTGAAGGTGTCTAACATGGATTATCATTTAGCTCGTTGTAAATTGAAGGCGAATGGGAAGTATGCGTGTGAAGTGTGTGCAAAAGTGTTCCCCAGCTCCTTCCATTGCAATGAACATATGGAGGAACATGAACGCAAGTACCCCTGTAAAATGTGTAAACGTTCGTTTGATAAAGAGAGAGCGCTAATCACACATATGGCCAAACATTATCGAGATGTAACTGAAGATAAAAAATTCAAATGCGATAAATGTCAATTTTCGTTTAGACTGAGATCTGATCTTCTCATGCATGCGCTTAGTCATTCGGAAGGCATGCCAGTGTATAGGTGTGACGATTGCAACATTACTTTTTCATCTGATAGTGTACTTGCAACACATTTGGCATCGCACTCTATCCGTAAGTGTAACAAGTGTAACACTAAATTCAGTTCCAAATCACTGCTACAACGTCATATTAGCGATTTTCATGGGGAAGTTGAATCAAATCCACCTGCAACAGTAACCGAACCAAATTTGGGCCTTGTCATGTTTGATAGCGAGTTTGTGACAATATCTGACGCTAATGCTATGAACGAAAACAAAGTCCTATACAAGTGTAAATTGTGTACACGGTTGTTTGCGACCAAGACCAATGTAAGGGCACATTTGAAAAATCACTACACAAAGCACTTGGACAATATACGTTTGGAAAGCAGTTTCGAAAGCAGTCTATCCAAACAAGACGTTCGTGTTTTCAAATGCAAACTGTGTGGATGTAGGTTTGTATCGGAGAAAATAGTTGTGGCTCACATCAAGTCGCACTTTTTAAAGCGTCCCTTCGTTTGTAACATTTGCGGATGTACGTATGATACAAATGATAAATTGAACCAACACTGGATGTTTCACGAGGAAGCAAGGCGGATTAAGATTGCTCCAAAGTTAGCTCCTAAAACCGACTTACAATCGACTAGCAGTGAGTCACAAAACGAGTCGAAATCAAGCAGTAGTGAGTCTCAATTGAATTTGAATGAATCAGAGATGTCTATGCGTGTACCAGAAGTTTCCATGAAGGTGTCAGATTCAGATGAGTCTAAGCATGTAATTAACGTATCAGAAATGTCTTTGAATGTACCGGGAGAATCAATGGACGCATCAGAAACGTCTATAAATGAACCTGAAGTATCAATGAATGTTTCTGATATGACTGTGAATGTGTCTGAGATGAATATGGTTCCTATGGATACAACTGACGATAATAGTACAGTTGAGAAGGAAAATAATGAATCGGATGCTGACAATAATGAAGGAGATATGAATGAATCTGAGAGTACGTTTATCAAAATGGAAACACCTGACTTGCTCGAGAGCGAACTGCAAGAAGAAGAGGTGGATGATCCTGAGGAAATGGATGTCAATGAAATTCCCGAGCCAGAAGTTGATTTCAAGGTTGATGAAAGTGTTGAAGGTGAGAGTGAAAGTGAAAACGCGGCTGGTTTTCCGTTTTCACTGGATTTTTCCTCGCTGGGAAATAACTCAGATGATGAGATTGACGAGAACGCTCTTACTCCCGAAGTGAATCTGGAAGAAAGTGATGGAGATATCAATCCCGATATTACTGAAGAAACCTCGGCCGATGGTAAAAAATATTGCCCCAAATGTAAACTACCGTATAGAAATCTCAAAGCGCATACCTTTAAGTGTCCTATGAAGTATTCACGGTTGTGCAAACCGTGTGGGAGGTATTTTAAAAACGAAATCGGTTACAATATTCATTTCAACAAAATGCACCTGCAAAAGAGTAGTGAAGTTTTTAGTTGTGATAAATGTTCATCAAGTTTTCGACTTATTTCCGAGTTGAACGCTCATCAAAGAACACATTCCAGTGTACCAGTATTCACTTGTCCAATTTGCGGAGTTTCGTTTTCATCGGAAAAAGTACTCAACACACATTTGAATACACACTATGTCAAAAAGAATCCAACCGAAACCGCACCGTTACGTAGTGAGAAACCTAGGATCGTTCCGAAAGACTCCAATTTCCCGTGTAATATCTGCGACAAAAACTTTGGTGATCATGATGAATTGGTTGAACATATTAAGATCCACTTCAATAGGAAGAGGACGTATGCTGGGATGAGAGTAACGTAG
- Protein Sequence
- MDEMDFNFVDVSKQSEADGNDDDDDRDHFDESNAMAVDPLSGTDNPLSNENPEIKGEYDNELILKCEPIDYDNEDVEDARDESQSNDGTAILPGNEDSRSPVNEEPEYSIFIKNEPPDLDPTPAEESQPKGSSPANIKVKRDLFSEDSSGGKGSQDSSAMNQKVLKSSSVSQPSALQSSSVAHTNVVQSLSVAQSSTGNSSSVVVQSSTVAQPNVVQSVSAVQPSVVQNVVQPNLIQSTPLTQTNTVSALSQNNGLNLLQNSLLQPNNVIYVVPSNIPGQPYQFIMGNAQTMSQYGSQAIGIIPLPNSAIGQLANTAMQPQPMVNGNIQQMPGGTIQHVPGGTLQQVPGGTLQQVPGGTIQQMPNGTFQQMPNGSIQQMTGGTIQQIPNGTFQQVPGGTIQQLPNGTFQQVPAGTIQQLPNGTFQQVPAGTIQQMPDGTFQQIGVGTIQQLPNVQQVSSSTTAPNQSDAIQQVASGTIQQIQTGSVQVAASKTHPTNGSIQQIQSGTVQQIQSGTIQQVAGGTIQQIQSGTIQQFSNGTIQQLSTGTIQQISGGTIQQVTNGTIPQMAQSMPITNGLITPTAQNMSFSNNFANQMGATNMLPQNIPVSGSFLPQLTPNMQLPNSYILQTNQPNLQIPSSVQTTQATANSIPVQATQATTNTKPVLTVASSANSTQRSQQKTIQTTKPLLPKVTQATPNTVVTQNQQKLKVPVPAPAQSTSKTLTRRATTASQLQSITSLKPEVMQTVKVVTKRIGNETETTIIAIKRRKKKGRYTILKLRKLPSSEPDSETVDAPTISTPVTVKNSAAKPCLKPLLPKEPLLPIPVSSIMEIINSQSNPQTITTTVPLTSQSATSSATVLSQETQNLILPDNVLPQNISNNLLPQTVTSILPETSQQTITLAGNVIPQTSSIIPLAGQNSVPQVSNVISLSSPNILTTELTQPVSTSSLQKPAEESSKLLQKDSAKKGITKNIPIAPKTPLNDSDEEEEKPEPKYLTRSAKRELENLNKNSENNSSSYPASTVSTKPVSILPLTSSKLVPILPTGSNSTKLVPILPAPVADQSITSLNETGDKDGEKMAVDEVEHEQVGDNQEIVIKKELEDENSNSVDPNVSDGLNKTEQNVSDGLNKTTIKAEPNVSEGLNVEQNVSDVLNKTINVEPIVSDGLNQTINQTLIITSPLDQFPRILPKPTAASSELLKCPKCWAELDNQADLEMHKRIYHNKRYPCVCGKGFESMIGLKIHRHTCLKVKNPCETNATLTGEYFITNGKKDSSVLGEDNVEMKEEVDEDEMKIVRVDKEKWRKCSHCKLKVSNMDYHLARCKLKANGKYACEVCAKVFPSSFHCNEHMEEHERKYPCKMCKRSFDKERALITHMAKHYRDVTEDKKFKCDKCQFSFRLRSDLLMHALSHSEGMPVYRCDDCNITFSSDSVLATHLASHSIRKCNKCNTKFSSKSLLQRHISDFHGEVESNPPATVTEPNLGLVMFDSEFVTISDANAMNENKVLYKCKLCTRLFATKTNVRAHLKNHYTKHLDNIRLESSFESSLSKQDVRVFKCKLCGCRFVSEKIVVAHIKSHFLKRPFVCNICGCTYDTNDKLNQHWMFHEEARRIKIAPKLAPKTDLQSTSSESQNESKSSSSESQLNLNESEMSMRVPEVSMKVSDSDESKHVINVSEMSLNVPGESMDASETSINEPEVSMNVSDMTVNVSEMNMVPMDTTDDNSTVEKENNESDADNNEGDMNESESTFIKMETPDLLESELQEEEVDDPEEMDVNEIPEPEVDFKVDESVEGESESENAAGFPFSLDFSSLGNNSDDEIDENALTPEVNLEESDGDINPDITEETSADGKKYCPKCKLPYRNLKAHTFKCPMKYSRLCKPCGRYFKNEIGYNIHFNKMHLQKSSEVFSCDKCSSSFRLISELNAHQRTHSSVPVFTCPICGVSFSSEKVLNTHLNTHYVKKNPTETAPLRSEKPRIVPKDSNFPCNICDKNFGDHDELVEHIKIHFNRKRTYAGMRVT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -