Basic Information

Insect: Sogatella furcifera
Gene Symbol: L
Assembly: GCA_014356515.1
Location: chr2:36950829-36981824[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 7.1e-06 0.00037 21.0 1.0 1 23 88 110 88 110 0.98

2 22 0.34 17 6.3 5.9 1 23 116 138 116 138 0.98

3 22 1.3e-06 6.6e-05 23.4 2.3 1 23 144 166 144 166 0.99

4 22 2.9e-05 0.0015 19.1 0.2 1 23 172 194 172 194 0.98

5 22 0.0014 0.074 13.8 0.5 1 23 209 231 209 232 0.96

6 22 0.082 4.2 8.2 0.3 3 23 322 343 320 343 0.93

7 22 1 53 4.8 0.0 2 23 357 379 356 379 0.88

8 22 0.82 43 5.1 0.1 3 23 438 458 437 458 0.97

9 22 0.59 30 5.5 0.1 3 23 471 492 470 492 0.93

10 22 1.9 98 3.9 0.1 8 23 512 528 500 528 0.77

11 22 2.8 1.5e+02 3.4 0.1 1 23 533 556 533 556 0.92

12 22 0.052 2.7 8.9 0.2 2 23 629 650 628 650 0.96

13 22 0.0061 0.32 11.8 1.3 2 23 655 676 654 677 0.94

14 22 1.7 89 4.1 0.3 2 23 753 776 752 777 0.87

15 22 0.0023 0.12 13.1 3.5 2 23 798 819 797 819 0.96

16 22 0.00072 0.037 14.7 1.1 1 23 829 851 829 851 0.98

17 22 0.069 3.6 8.5 0.5 2 23 859 880 858 880 0.97

18 22 0.024 1.3 9.9 0.0 2 23 959 981 958 981 0.95

19 22 0.035 1.8 9.4 0.2 1 23 985 1007 985 1007 0.97

20 22 1.1 59 4.6 0.2 2 23 1029 1050 1029 1050 0.95

21 22 0.0091 0.47 11.2 0.3 1 23 1058 1080 1058 1080 0.97

22 22 0.06 3.1 8.7 1.2 1 23 1087 1109 1087 1109 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	7.1e-06	0.00037	21.0	1.0	1	23	88	110	88	110	0.98
2	22	0.34	17	6.3	5.9	1	23	116	138	116	138	0.98
3	22	1.3e-06	6.6e-05	23.4	2.3	1	23	144	166	144	166	0.99
4	22	2.9e-05	0.0015	19.1	0.2	1	23	172	194	172	194	0.98
5	22	0.0014	0.074	13.8	0.5	1	23	209	231	209	232	0.96
6	22	0.082	4.2	8.2	0.3	3	23	322	343	320	343	0.93
7	22	1	53	4.8	0.0	2	23	357	379	356	379	0.88
8	22	0.82	43	5.1	0.1	3	23	438	458	437	458	0.97
9	22	0.59	30	5.5	0.1	3	23	471	492	470	492	0.93
10	22	1.9	98	3.9	0.1	8	23	512	528	500	528	0.77
11	22	2.8	1.5e+02	3.4	0.1	1	23	533	556	533	556	0.92
12	22	0.052	2.7	8.9	0.2	2	23	629	650	628	650	0.96
13	22	0.0061	0.32	11.8	1.3	2	23	655	676	654	677	0.94
14	22	1.7	89	4.1	0.3	2	23	753	776	752	777	0.87
15	22	0.0023	0.12	13.1	3.5	2	23	798	819	797	819	0.96
16	22	0.00072	0.037	14.7	1.1	1	23	829	851	829	851	0.98
17	22	0.069	3.6	8.5	0.5	2	23	859	880	858	880	0.97
18	22	0.024	1.3	9.9	0.0	2	23	959	981	958	981	0.95
19	22	0.035	1.8	9.4	0.2	1	23	985	1007	985	1007	0.97
20	22	1.1	59	4.6	0.2	2	23	1029	1050	1029	1050	0.95
21	22	0.0091	0.47	11.2	0.3	1	23	1058	1080	1058	1080	0.97
22	22	0.06	3.1	8.7	1.2	1	23	1087	1109	1087	1109	0.96

Sequence Information

Coding Sequence: ATGCTCCAAGTCATGCTCTTCAAAGGCAACAGTTCTCGTCTACAGATGCTCATCGAAAAGATCCAGGCTAACAAGGAGAACCACACTGAACAGGATATCAAAGAGGCGCTGGGTAGTAGCGGCACGGAGGGTAGTAGCGGGGGCGGCGACTCGTGGGTGAGCGAGGAAGGCGGCAGCTCATGTGCCACCCCCAACTCGGCGGCAGCTGACTCGCCGCCTTCCGACCTCGCCTTCACCGTCGGCGTCACCGAGGGAACTCCCTATGCCTGCCAGTTCTGCGACAAGGCCTTCCCCCGCCTCTCCTATCTCAAGAAGCATGAACAGACTCACAGCGACCAAATGCCATTCAGATGCGAGTTCTGCAGCCGCTTATTCAAGCACAAGCGTAGCCGCGACAGACACATCAAGCTGCACACGGGAGACAAGAAGTACAGGTGCACCCAGTGCGAGGCGGCCTTCTCCCGCAGTGATCATTTGAAGATCCACATGAAGACGCACGACAACCAGAAGCCGTTCCAGTGCACGGTGTGCAACCGCGGATACAACACGGCCGCCGCACTCACCTCGCACATGCAGAACCACAAGAAGGCATCACCCTCATCCTCGCCCCACCCCACAAACACATTCAAGTGCCTACAGTGTGCCGAACTGTTCAGGAAACCCGAGGAGTTACAGGCTCACATGGCCAGCCACCACCAAGTGGAGCGCTCCCCAACCCCTTCCTCCACCCCGCCATCCATCCAGCGCAACTCAGCTGTGCCCCCTCGACTGCCCTTCCCCCTCCCGCGTCTCGCATGCATGTACTGCACCAAAGACAACTTCAGCACCATGGAAGCGCTGCACCTACATGTGCAGGCTATGCATGGCTCAATTCTGAACGGCGAGCTAGCATCGCGAGTGAGCACGCCGACAAGCCAGCCGAGCAGCCAAGAGCTGAGCAGTCCGTCACCTCTGCCTCTGGCCTGCGAGTTGTGCACGATGCGGTTCGGCAGCATGTCAGCGCTGCACAAGCACGCCCTATCAGTGCACGGCTTCCGTCCGCAGCCCAACAAAGACCAACAGCCGCTCTACTGTGTACAGTGCTCGCTGCCCTTCCCCACCCCCGCATTGTTCGCCGAACATTATGTGCTGCTGCACGGCCTGGCGCTCGCCGAACAACTCAAGCCAACTGACCTGTCGCTCGGCAAAAGGCCGACGCATGACGAGCATGCGCATTCGCGGAAACGGCCGCGTCACGCTGAGAACGGTCACGGCAATAGGCAGCAGTCTATGGGTCGCCACCACGAGTATGAGCACTCTGGCACACTGCTGTGCAACCAGTGCAACGCAGCGCTGCCCGACTTTGATTCGTTCCGCAGCCACGTGAAGGCGCACCTCGAGGAGGCGGGAGGGGGGGGCAGCCGCCCCCACTGCCCCCAGTGCCCGGGGGCGCGCTTTGCCAGCCAAGAGGAGCTGGTGCAGCACACCGCCTCTCACCTTCTGGCCACAGACCTGGCCTATGCCTGCCCCTCGCCCTCCTGTCAGCGACACCCCCTCCCTTTCGCGCAGCCCGATGAGCTGCAGCGGCATCTGTTCGATCTGCACACGCATCACCTGTTCCGCTGCGCACTCTGTCGCGAGCTGTTCGACTCCAAAGTTGCCATACAGGTACACTTTGCAGTGAAGCACAGCAATGAGACGAAGGTGCTGCGCTGCACAGCTTGCCAGGGAGGCGCCTCACAGTTCCACTCGGAGCAGGAGTTCACCGCACACGTGCGCACTTGCCATCTACCTCCCCCTCCACCACCACCCTCACTGCCCCCTCCGCCTCCAGCCGCCGCCGCCTTCCTGCAACAGCATCTCATCGCTTCCGACCAGAAGTCGCCACTTCTTTCACAGCTGGTACGCTGCCTGTTCTGTAGACTAAGCTTCAGTTCGGAGCTGGAGCTGCAGCTGCACCTGGCCGTGCACACCAAGCAGCTGCAATGTCCCCTCTGTCCGCAGACCTTCCATGTCGAGTTCCTGCTTGATAGGCACATGCAAGCACATCACACTGTTCAGAATGTCATGAACGGAGACGATCATGACCAGAAACCCATGCCAACAACCCCAAGCAAGACAACCAGCTCCTCCTCTAATCGCAGTTGCAATTCAGCCAACTCTGATGGCAGTGGAGCGAAAAACAATGCAATCATTCCAAATGGCAATACTAATAATAATAACAATAGCAATATTAACAACAACAATAATAATTCAAGCAGCAATAATAACAGCAGTTCATGTGAGCTGTGTGACCGTTCGGATTTTTCAAGTGAGGCAGAACTAGCAGCTCACAGGAAGCTTATACATCACGTCAAATCACAGAATTCATCAACACCTTCATCATCCTCTTCATCTGGGAAGGTAAGCCTTCATTGTGCTTACTGCAGTGAGAACTGCAAATCCAGAGCCGAGCTTGAAAACCATATGAAGACTCATTCTCAGGGACCCGCCACATCAGGAAAGCACAAGTGCAACATTTGTGATGAAATCTGTCCATCTGCATCAACGTTAGCCGAACACAAACTTACGCACTGCAAGGTGATAAACGGTTCATCATGCACACAGTGCAAAGCATCGTTGAGCAACGAAGAGCAATACCTGGATCACCTTCGCCAGCACAGTTGTCCCTCTCCCACCCCTTCACCCACCCTCTCCCTGCCAACCCCCTGTGTGGTGTGTCGACAGACGCTTGTGTCTGAGATGGAGGCGCGCATCCACGCTCGCTTCCACCTACAACAGGTCGAGTCGCCGGCTCAGTGCTGCAGTTGTCTACAGGGCTTTGAAAGGCGAGATCTGGTGGGTGGATTTTGCAGGGACTGCTACAATAAGCACGGCAAGTCATCGTCACCAACCCGTTGTCCTGAGTGCCAGCTCAAATTCGAGACCGGACCAGCACTTGAGGCGCATCTTGCATCCGTCCATAGCAAAGCCTATCAATGCGTCAAATGCCAGCTGAGCTTCGACAGCGAACGGGAGATCCAGCTGCACGTGGCTTCCCACCTGTTATCGGAGGGCGCACTACCAGGCGTGGCTCAACAGCTACCAGGCGCTGGTGCGGGCGAGGAATGTCGCCTATGTTTGCGCGTGCTACCCAACCGGCTGCAGCTGCAGACGCACCTGATAGAGCACACGTTCGCCGGCTGCTCCACCTTCACCTGCTACCTGTGCAGCGCTGTTTTCACGGCCGCTCACGGCCTGCAGTCGCATATCATGGAGCACGGCCCAGCTGCACGACCCTACGACTGTCCGCGCTGCACGCAGTCCTTCTTCTTCCGCGCCGAACTGGACAATCACAGCTACACGCATCTTGATGATGGCGACAAAGAGCAGAGGGTACCAACGCCCTCACACCATCGTCAACAGAACAAGTCACCAGCTGACATTGGAGGAGAATCTCACCAAAGGGAAGTAAAGCAAGAAATCAAAGAAGAAAATGGAAGAGATGACGAAGAAGATAGGTGTGAAAATGACGAAGATGATGATGAAGAAGAACAAATAGATGTTGAAGAGGGAGAAGCTGAATCCATACAGAAACCAACGTGCTCAGACTAA
Protein Sequence: MLQVMLFKGNSSRLQMLIEKIQANKENHTEQDIKEALGSSGTEGSSGGGDSWVSEEGGSSCATPNSAAADSPPSDLAFTVGVTEGTPYACQFCDKAFPRLSYLKKHEQTHSDQMPFRCEFCSRLFKHKRSRDRHIKLHTGDKKYRCTQCEAAFSRSDHLKIHMKTHDNQKPFQCTVCNRGYNTAAALTSHMQNHKKASPSSSPHPTNTFKCLQCAELFRKPEELQAHMASHHQVERSPTPSSTPPSIQRNSAVPPRLPFPLPRLACMYCTKDNFSTMEALHLHVQAMHGSILNGELASRVSTPTSQPSSQELSSPSPLPLACELCTMRFGSMSALHKHALSVHGFRPQPNKDQQPLYCVQCSLPFPTPALFAEHYVLLHGLALAEQLKPTDLSLGKRPTHDEHAHSRKRPRHAENGHGNRQQSMGRHHEYEHSGTLLCNQCNAALPDFDSFRSHVKAHLEEAGGGGSRPHCPQCPGARFASQEELVQHTASHLLATDLAYACPSPSCQRHPLPFAQPDELQRHLFDLHTHHLFRCALCRELFDSKVAIQVHFAVKHSNETKVLRCTACQGGASQFHSEQEFTAHVRTCHLPPPPPPPSLPPPPPAAAAFLQQHLIASDQKSPLLSQLVRCLFCRLSFSSELELQLHLAVHTKQLQCPLCPQTFHVEFLLDRHMQAHHTVQNVMNGDDHDQKPMPTTPSKTTSSSSNRSCNSANSDGSGAKNNAIIPNGNTNNNNNSNINNNNNNSSSNNNSSSCELCDRSDFSSEAELAAHRKLIHHVKSQNSSTPSSSSSSGKVSLHCAYCSENCKSRAELENHMKTHSQGPATSGKHKCNICDEICPSASTLAEHKLTHCKVINGSSCTQCKASLSNEEQYLDHLRQHSCPSPTPSPTLSLPTPCVVCRQTLVSEMEARIHARFHLQQVESPAQCCSCLQGFERRDLVGGFCRDCYNKHGKSSSPTRCPECQLKFETGPALEAHLASVHSKAYQCVKCQLSFDSEREIQLHVASHLLSEGALPGVAQQLPGAGAGEECRLCLRVLPNRLQLQTHLIEHTFAGCSTFTCYLCSAVFTAAHGLQSHIMEHGPAARPYDCPRCTQSFFFRAELDNHSYTHLDDGDKEQRVPTPSHHRQQNKSPADIGGESHQREVKQEIKEENGRDDEEDRCENDEDDDEEEQIDVEEGEAESIQKPTCSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00857948;
90% Identity: iTF_00857948;
80% Identity: -