Basic Information

Insect: Sogatella furcifera
Gene Symbol: V-ROS
Assembly: GCA_014356515.1
Location: chr3:4882274-4956460[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.14 7.4 7.5 3.8 1 23 1280 1302 1280 1302 0.93

2 13 0.0008 0.041 14.6 0.9 1 23 1307 1331 1307 1331 0.92

3 13 3.7e-05 0.0019 18.7 0.8 3 23 1365 1386 1364 1386 0.95

4 13 0.014 0.73 10.6 4.9 1 23 1392 1414 1392 1415 0.96

5 13 0.0069 0.36 11.6 0.4 1 23 1429 1452 1429 1452 0.96

6 13 4.2e-05 0.0022 18.6 4.1 1 23 1458 1480 1458 1480 0.98

7 13 0.00012 0.006 17.2 2.2 1 23 1486 1508 1486 1508 0.98

8 13 0.00071 0.037 14.7 1.3 1 23 1514 1536 1514 1536 0.96

9 13 3.4e-07 1.7e-05 25.2 1.2 1 23 1542 1564 1542 1564 0.99

10 13 6.8e-05 0.0035 17.9 2.8 1 23 1570 1592 1570 1592 0.97

11 13 0.29 15 6.5 3.9 3 23 1600 1620 1598 1620 0.96

12 13 0.0001 0.0052 17.4 0.6 1 23 1626 1648 1626 1648 0.97

13 13 1.4e-05 0.00072 20.1 4.1 1 23 1654 1676 1654 1676 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.14	7.4	7.5	3.8	1	23	1280	1302	1280	1302	0.93
2	13	0.0008	0.041	14.6	0.9	1	23	1307	1331	1307	1331	0.92
3	13	3.7e-05	0.0019	18.7	0.8	3	23	1365	1386	1364	1386	0.95
4	13	0.014	0.73	10.6	4.9	1	23	1392	1414	1392	1415	0.96
5	13	0.0069	0.36	11.6	0.4	1	23	1429	1452	1429	1452	0.96
6	13	4.2e-05	0.0022	18.6	4.1	1	23	1458	1480	1458	1480	0.98
7	13	0.00012	0.006	17.2	2.2	1	23	1486	1508	1486	1508	0.98
8	13	0.00071	0.037	14.7	1.3	1	23	1514	1536	1514	1536	0.96
9	13	3.4e-07	1.7e-05	25.2	1.2	1	23	1542	1564	1542	1564	0.99
10	13	6.8e-05	0.0035	17.9	2.8	1	23	1570	1592	1570	1592	0.97
11	13	0.29	15	6.5	3.9	3	23	1600	1620	1598	1620	0.96
12	13	0.0001	0.0052	17.4	0.6	1	23	1626	1648	1626	1648	0.97
13	13	1.4e-05	0.00072	20.1	4.1	1	23	1654	1676	1654	1676	0.99

Sequence Information

Coding Sequence: ATGGAGTTTTCGGCGGCCGACTATCGCGACCTGTTGGGGCGGTATGAGCAAGCGATGGCGGCGGGGCGAGGGGGCGGAGCCATCCAGGAAGTGGCCTGCAATTGGATGAACGAGAACTTTGATCGCTACGATAGGTGGACGGCTGAGACGGTGGGCGTCAACGAACTGTACATTGGTGGTATCTTTCCCGTGCTAATTTCCGAGTACAACGGACAGGGTATACTGTGGGCTTCCAAGATGGCAGTCAACGCAGTGAACGCCAACACAACATTGTTGAATGGCTACAAGCTGATTCTGCTGCCCAAAGACGGCAAGTGTCGCTCAGACGCTGTCATCAAGAGTTTTGTCGAATTCATCAAAGCCGATCGATTCCCCAAACTGGCCGGCATTCTCGGTCCTGCTTGCTCGGACTCAGTGGAGCCGTTGGCCGGAGTGGCAACCATTTACAAAACAGTGGTGATGAGCTACAGTGCTGAAGGCTCAAACTTCTCGGATCGCGTCAAGTATCCGTACTTTTTTCGAACCATCGGAGAGAATTATCAGTATACGTACGTGTACATGCAGCTGATGAAAGAGTTGAAATGGAATCAGGTGGCGGCTATCACACAGGACGGCACCAAGTACGGACAGTACATAGCCAAGCTGCAGGACAAGTTCACGGAAAAGAAAATGAAATTCGTCTCCAATCGCAAGTACCCGGTCGATCGCGAGCGCGGATCTATGCGAAAATACCTGAACGAAATCAAGAAGGCGAAAATCATAATTGCCGACATCTACAACGACGCGGCGCGTGACGCTATGTGCCAAGCGTACAAGCTGGGCATGACGGCGCGCGAAGGCTACGTCTGGTTTCTGCCCATGTGGATGACACCGCACTGGTACAACACCACTCACTACAATCTGGTCAACAACGAGAATGTCACATGCACCACTGAGCAGATGATCAAGGCGATCAACGGCCACCTGGGTCTGACATTCGCGCACTTCGGGCGCGACGATGACGTCACGCTGGAGAATCGGACTGTGCGCGAGTGGCGCAACGACTATCGCGCCATACTGGACAAAAAGCGCGACAGGGAGTCGATCTACAGCGGCTACGCCTACGACGCCGTCTGGACCTACGCGCTGGCTCTCGACAAACTGCTCAACATCAACTCGTCCTATCTGTCCAACCTGCACAATGAGGATACTGTCAAACTGCTGGTGCAATTCATAGCCGACACCGATTTCCAGGGCGTATCAGGCCGGGTTCAGTTTAAGGGTCGCTCCACTCGCCTCTCAGACATCCACGTGGTGCAGTGGCTCAACAACAAGACACACATTGTCGGCACATTCCATCCCAACGACTCTGATCCCGACGGAGGAGTGCTGAAACTAGACGAGTCGAGCATAGTGTGGCTGACACCGGACAGGAAGAGACCGGAGGACGGAGCCGAAGAGTGTTTCATTCAGTGGTTTGCCAATCTGTTGGACACATCGTGCGATCGCGCTCTCATCATGATGAATCTGTTTGCTCTGCTCATGCTCGGCCTGTTGGTCACCGTTATACTCATGGTGCTCAAAGGAAGGGTCGACGAGAACGTGGAGTTCTCAATCAAACTGAAGAAGCGGTTTGGCGACGACATGTTGTCCAGCTTGGACGCGTGGGAGTTGTCGCACAGCAGTGTGATCATCAACCGAGTGCTGGGCGAAGGCGCCTTTGGCACCGTCTACGGAGGAGAGGCCAGCATCAAGGAGGACGAGAATTGGGTAAGGGTACCAGTTGCAGTGAAAGCGTTGAAGGCCGGCTCAACAACCACGGACAAGATCAACTTTTTCAGCGAGGCCGAAACCATGAAACGATTCGATCACAAGAACATTGTCAAGCTGCTCGGAGTCTGCATGAAATCGGAACCGCTCTACACCATCATGGAGTTCATGCTCTACGGTCAAGATGTGGCGTCAAGAAACGTTCTGGTGGGCAAGAAAATTGTGAAGCTCGGAGATTTCGGAATGGCGCGACCAGTGTTCGAAAGCGACCACTACAAGTTCAGTAGAAAAGGTTGCTTCTGTTTTGGGGGCGATGGGGCATGCTCCACAGGCATGCTCCCCGTACGCTGGATGTCTCCGGAAAGCCTCGGGCTGGGCGTCTTCTCGCCGTCCTCCGACATTTGGAGCTACGGCGTGCTGCTCTACGAAGTTGTGACGTTTGGAAGTTTTCCCTTCCAAGGCATGAGCAACAACGAGGTGCTCGATCACGTGAAAGCCGGTGGCACTCTGGAAATACCCAAGAAGGTCAAGCCGGGACTCGAAGGCCTGATACGGTCCTGTTGGGACATTGATCCGAAGCGGCGTCCGCCCGCCTCGGAGATAGTCGTGTTCCTGGCCAACCATCCCAAACTGATCACACCCTGTCTGGATGTGCCGCTGTCTTCTGTACAAATTGAAGACAGCGATCAGTTCCCGATGCCGATCCAACAGCAGCCGCTGCGTTATAGGGGGAGCGTGGGCGGAGGTGGGGCTGGGGTCGCTACACGCAACCGTTCAATGACGTCACTGTTGAGCAACGGCAGCGCGGTGGTGACGTCAGCACAACCACAGCCACTGCCAGCGCAGCCGAGGCGAAAAATGTCGTGGTTCGAGTCTATGATAAAGCAGCATCCGATCAGCCCTGCACAGTCCGACAATGATGACGGCTATGTCGCATCGCAGTTTGTTACAAGTGAGATGGCGCCCGCGGCTCATATCTGGCCGAACCCGGCAGACGGTCTGCAGAGTAACGGCGGCGTAACGGTGGGCGACGGTGGAGGGGGGGAGTGCAAGTACATTGCCATGATGAACGTGACACCGCTGCCGAGAGGGGGAGGGGTTGAAGATGATGGTATATTACCAAGAACCATCTGTCCAGGATGCAATCTGCAACTTCACTCTACTGTACAATTCTTCGATCTGCTTATCGAGGGTCAGAAAAAAATCAGAGAACTGTGGAAGGAACAGGTGAACAGAGAAAAAAGACGTGAGAAACAGCAGCAACAGCAGCAATCACTTTTGATATCGAAAAACAGGTCACCTCTGTTACAGACTTCGGTAGCTGGTATTCAATTAGCTTCAAACCAGTCGGCCGCTCTTACCATTCAGGACAGTTGCAGTGCAGTGAGCGGCGGCGCCTTTGATCTGTTCGACACGTCGTCACTATTTCAGACGACAGATCATGACGTCACCCAGCCACCTGTTGATCAGCACACTCTGCAACAGCTCGATGGTCTGCAGCTCGATCAAGTGCTGGTGGAGGGTGAGGCGATCTACGACGCCGACCACGGCCTGGTGTTGCGTGTAGCCGGACTGGAGCGACCGCGCAAGAAACGCGGCCGACCGCGTAAACAGCTGACGGCGACGCCGGCTGAATCAGCTGAGACGATAGCTGATGAACAGCCGCTGCCGACAGCTGACGAGGAGCAGCTGATTGAGGACGGCGATGGGAGGCGGCGGCGTCGGCGGAAGATTCCGCTCAGAGAAGCGGTGCAAGGCAAAGAGCTGGAACGAATACTGAAAGAGGAAGGCGTCACTGATGGAGAGGACGAAAGAGAAATGGTGCCAGAAGGAGAAGAAGGAGAGAGAAGAGAAGGAGAAGGGAATGAGGGAGAGGGTGACAACGCAGAGGATGCAACAAGTAGAAATCTACTGACTGGCATTGCTGCCGATAAAGAAGTGATAGGGCACCTGGAGACGAGCGACGGCCAGGTGGGTGAGCTGATAATAGTGAATAAAAAGGCGACAGTGGCGGCCAGTGCCAGCAGTCGTCTGGCTCGGCTGCATCACAACCAGAAGCGACGCTTACGCCGGCGCAAGAAGCCGCGTTTCTACTGCGACATCTGCGGCCGCACCTTTATGCACATTGGCAAATACCGCTATCACAAGTCATTCCACACGGGAATCAAGTTTGAGTGTGTCGAGTGCAAAAAGCGATTCACGGCCAAAGAAAACTTCGAACTGCATCAGAAAATGACTGGACATACTGGAGAAGGTATTGTCAAGGAGAATGAGGAAGGAGAGAGCAAAGAGAACGAAGAGGGAGGAGGAGGAGGAGGAGGAGCGGAAGGTGGCAAAGTGGCCTGCGAAAAGTGTCAGAAAACATTTTCGACCAAACAGAACCTGGAGATTCATAGAAAAGCGGTGCACTGTGGCGAGAAGCCATACAAGTGCGAGGTGTGCGACAAGCGATTCGGCTATCAGAACAGTTTGCGCTGTCACGTGCTCACTCATCACGAGCAAAGTCCAGATGACAAGGTCTCACAAGGCGGCGGCTTTCCGTGCGACATCTGCGGCCGGCGCCTCAACCATCCCAGCTCGGTGATCTACCACAAGGAGACAGAGCACAGCGATGGCCGACGCTTTGTGTGCGACCGCTGCGGAAAGGCGTTCAAGCACAAACAGCTGTTGCATCGACATCAGCTGGTGCACACCAATCACAGGCCGCACCAGTGCCAGACGTGTTCGGCCAGTTTCAAGACAAAGGCGAATCTGCTGAGTCATCAGGCGACGCACACCGGCGAGAAGCGCCACTTCTGCGAAATTTGCGGCACTCAGTTCGCCTACAAGACCAGCCTCATACTGCACTATCGATGGCATTCCGGTCAGAAGCCGTACGAGTGCGAGGTATGCAAGAAGGCGTTCTCGCAAAAGGGCAACCTGCACGAGCATATGCGCATCCACACCGGCGAAAAGCCCTACGCCTGCATGTACTGCGAGAAGAGGTTCACCACCTCCTCACAGTTTAAGCTACACGTGAAACGTCACACCGGCGAGCGTCCGTGGGCGTGCGACGTGTGCGGCAAAACGTTCCTGCACAAGGACACGTGGAAGTGTCACCAGCGTCGGCACAACAACGATCGGCCTTTCGCCTGTGTGCTGTGCAGACGCACGTTCAGCGAGCAGTGGGCGCTCAAAAAGCACATGCGACTGCACACCGGCGAACGGCCCTACCAGTGCCAGCACTGCGGCAAACTGTTTGCCGATTGCAGCAATTTGGCCAAACATCGCAAGGTTCACGAGCGTGACAACGAGCGATTCGCAGCGAACGCGGTGGCGTTGGGCGGGGCTGAAGAGGGGGAAGCAGAAGGGGGCAGTGGTGGTGGGGCGGCGGCGGCTGATGAGGTGGAGGAGGGCGGTGCAGTGGAGGCGGCGGGGGCAGCCATGTGGAGCGCCGCCCCCGAACAGGTGTGCGAAAAGTATTTGCTACCGGGTGTGCTGGGTGGTGGTGACGGCGGTGGGGGTGATGGAGGGGGTGAAGAGGACCCCTCCAAAGGACCGACGCTGCAATTCACCGACGAGCACGGCAACCCTGTGCAGATCACGCTCACTGACGACAACCAGTTGCAGCTGTTGAAAGAAGAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAAAAAGGAAAAGAAGAAGAAGAAGAGGAGGAAGAGGAAGAGGAGGAAGAGAAAGAAGAAGTGTTGATGGCCGTGGGTGATGATGTAGGCGATAGTGAGGGGTCGCTACAGTTGCAGACGTCAGCAGTTTTGGAGGCGGCGGGGGCGGGTGCAGGGGCCAACACCAACTACGTCATCAAAGTGACGCCCGAATCGGCTGCCGCACTGATGAATGGGGATGGAAATAAGCTAGCTACAGCCATTGAAGGTGACATACCAGCTTCGTATGCGTTCATGATTCAGAACACAGCTCAAAAAGACAATCTAGTCGAGACATTCTGTGCAAATTCTGTGCAAATTCCTGCCGAATACCTCAACATTAACTAA
Protein Sequence: MEFSAADYRDLLGRYEQAMAAGRGGGAIQEVACNWMNENFDRYDRWTAETVGVNELYIGGIFPVLISEYNGQGILWASKMAVNAVNANTTLLNGYKLILLPKDGKCRSDAVIKSFVEFIKADRFPKLAGILGPACSDSVEPLAGVATIYKTVVMSYSAEGSNFSDRVKYPYFFRTIGENYQYTYVYMQLMKELKWNQVAAITQDGTKYGQYIAKLQDKFTEKKMKFVSNRKYPVDRERGSMRKYLNEIKKAKIIIADIYNDAARDAMCQAYKLGMTAREGYVWFLPMWMTPHWYNTTHYNLVNNENVTCTTEQMIKAINGHLGLTFAHFGRDDDVTLENRTVREWRNDYRAILDKKRDRESIYSGYAYDAVWTYALALDKLLNINSSYLSNLHNEDTVKLLVQFIADTDFQGVSGRVQFKGRSTRLSDIHVVQWLNNKTHIVGTFHPNDSDPDGGVLKLDESSIVWLTPDRKRPEDGAEECFIQWFANLLDTSCDRALIMMNLFALLMLGLLVTVILMVLKGRVDENVEFSIKLKKRFGDDMLSSLDAWELSHSSVIINRVLGEGAFGTVYGGEASIKEDENWVRVPVAVKALKAGSTTTDKINFFSEAETMKRFDHKNIVKLLGVCMKSEPLYTIMEFMLYGQDVASRNVLVGKKIVKLGDFGMARPVFESDHYKFSRKGCFCFGGDGACSTGMLPVRWMSPESLGLGVFSPSSDIWSYGVLLYEVVTFGSFPFQGMSNNEVLDHVKAGGTLEIPKKVKPGLEGLIRSCWDIDPKRRPPASEIVVFLANHPKLITPCLDVPLSSVQIEDSDQFPMPIQQQPLRYRGSVGGGGAGVATRNRSMTSLLSNGSAVVTSAQPQPLPAQPRRKMSWFESMIKQHPISPAQSDNDDGYVASQFVTSEMAPAAHIWPNPADGLQSNGGVTVGDGGGGECKYIAMMNVTPLPRGGGVEDDGILPRTICPGCNLQLHSTVQFFDLLIEGQKKIRELWKEQVNREKRREKQQQQQQSLLISKNRSPLLQTSVAGIQLASNQSAALTIQDSCSAVSGGAFDLFDTSSLFQTTDHDVTQPPVDQHTLQQLDGLQLDQVLVEGEAIYDADHGLVLRVAGLERPRKKRGRPRKQLTATPAESAETIADEQPLPTADEEQLIEDGDGRRRRRRKIPLREAVQGKELERILKEEGVTDGEDEREMVPEGEEGERREGEGNEGEGDNAEDATSRNLLTGIAADKEVIGHLETSDGQVGELIIVNKKATVAASASSRLARLHHNQKRRLRRRKKPRFYCDICGRTFMHIGKYRYHKSFHTGIKFECVECKKRFTAKENFELHQKMTGHTGEGIVKENEEGESKENEEGGGGGGGAEGGKVACEKCQKTFSTKQNLEIHRKAVHCGEKPYKCEVCDKRFGYQNSLRCHVLTHHEQSPDDKVSQGGGFPCDICGRRLNHPSSVIYHKETEHSDGRRFVCDRCGKAFKHKQLLHRHQLVHTNHRPHQCQTCSASFKTKANLLSHQATHTGEKRHFCEICGTQFAYKTSLILHYRWHSGQKPYECEVCKKAFSQKGNLHEHMRIHTGEKPYACMYCEKRFTTSSQFKLHVKRHTGERPWACDVCGKTFLHKDTWKCHQRRHNNDRPFACVLCRRTFSEQWALKKHMRLHTGERPYQCQHCGKLFADCSNLAKHRKVHERDNERFAANAVALGGAEEGEAEGGSGGGAAAADEVEEGGAVEAAGAAMWSAAPEQVCEKYLLPGVLGGGDGGGGDGGGEEDPSKGPTLQFTDEHGNPVQITLTDDNQLQLLKEEEEKEEEEEEEKGKEEEEEEEEEEEEEKEEVLMAVGDDVGDSEGSLQLQTSAVLEAAGAGAGANTNYVIKVTPESAAALMNGDGNKLATAIEGDIPASYAFMIQNTAQKDNLVETFCANSVQIPAEYLNIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -