Basic Information

Insect: Sogatella furcifera
Gene Symbol: -
Assembly: GCA_014356515.1
Location: chr5:7422501-7439495[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 6.2e-06 0.00032 21.2 1.4 1 23 274 296 274 296 0.98

2 9 5.5e-08 2.9e-06 27.7 1.7 1 23 302 324 302 324 0.98

3 9 0.00073 0.038 14.7 0.5 1 23 330 352 330 352 0.97

4 9 3.3e-05 0.0017 18.9 1.0 1 23 358 380 358 380 0.97

5 9 5.4e-05 0.0028 18.2 1.7 2 23 1011 1032 1010 1032 0.96

6 9 3.8e-08 2e-06 28.2 1.7 1 23 1038 1060 1038 1060 0.98

7 9 0.00058 0.03 15.0 0.5 1 23 1066 1088 1066 1088 0.97

8 9 0.00033 0.017 15.8 0.8 1 23 1094 1116 1094 1116 0.99

9 9 0.026 1.3 9.8 2.6 1 23 1122 1146 1122 1146 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	6.2e-06	0.00032	21.2	1.4	1	23	274	296	274	296	0.98
2	9	5.5e-08	2.9e-06	27.7	1.7	1	23	302	324	302	324	0.98
3	9	0.00073	0.038	14.7	0.5	1	23	330	352	330	352	0.97
4	9	3.3e-05	0.0017	18.9	1.0	1	23	358	380	358	380	0.97
5	9	5.4e-05	0.0028	18.2	1.7	2	23	1011	1032	1010	1032	0.96
6	9	3.8e-08	2e-06	28.2	1.7	1	23	1038	1060	1038	1060	0.98
7	9	0.00058	0.03	15.0	0.5	1	23	1066	1088	1066	1088	0.97
8	9	0.00033	0.017	15.8	0.8	1	23	1094	1116	1094	1116	0.99
9	9	0.026	1.3	9.8	2.6	1	23	1122	1146	1122	1146	0.95

Sequence Information

Coding Sequence: ATGCTGTACAAGGACCAGATGGAGGCGCCGCGCAACGGAGGCGCAATGGGCCCCGTTGGCCTCACTAATGGCACCGTGGCGCCTTGGGGCCCCAGCGAGCCCTATCCGGCGGCCAGTCCCACGCTGATTCAGCAGAACTCGGCGGCCGCGAGTCCGACTCTGATCCAAAATGGGGCGCCGTCACCGCAGTCGGCGTCCGTCACTGTGACAGTGCAAACCAACCAGGACCAGCAGTCGCACCACAGCCTGTCGCCTCCCTCCAACGTGCAGTCACCTGTCGCCGCCTATCAGCAGCAGTCGCAAACCGATCAGCATGCCTCGCAGCAAGTGAACGGCGGTGGCGCCGCTGACGACGACACTGTGGGCCAACAACAACAGCAGAGTGCAGCGTCCACTCCGCACAGTCCGGCTTTGGCGCAGTCCGACACCGGCGGTGACCAGCAGCAGCAGCAGCATCCTAGCGTTGCGACAGAGCGTCCCCTGTTCGACACACCCTACTACCGAAACGGTGGTGGAGGGGGGACAGCGGCGGCACCCCCTCCCCCTCCCCCACACATGCTCACCACCAACTCATTCATGACCTATTTGAAGCAGCAGCATCAGCATCAGCAAACGCAGCAGCAACAGCACAACCCGAATCAGCACAGTCAGCACAATCAGCAGCAACAACAACAACAGCAGCAGGGTGTGGTGATGTTGACCCAGTTGCAGGCGGCCGATCCGGGGCCAGATTTTGCAGCCGGGATGCCCGATCTGTTGGTCGCACAGCAGAATAACAAGATTATTTCCAAGGGCAACCAACACTCGGACCTGCGCCTGTTCAAGTGTGTCACCTGCGGCAAAGACTTCAAACAGAAGTCGACCCTGCTGCAGCATGAGCGCATCCACACCGACTCCCGGCCCTACCCGTGCGCCGAGTGCGGCAAACGCTTCCGCCAGCAGTCGCACCTGACTCAGCATCTGCGCATCCACGCCAACGAAAAGCCGTTCGCCTGCGTCTACTGTGAACGCACGTTCAGGCAGCGCGCCATTCTCAACCAGCACCTGCGCATACACTCTGGTGAGAAGCCCTTCGCGTGTACCCAGTGCGGTAAGCGCTTCCGCCAGAAAGCCATCCTGAATCAGCACGTCCGAACACACCAAGGCGAGCAACCAAATGCCCTTTACCTTAAATCTCCTCCACCACCGACACACCCGAGAACAGTTCTAATGTTGTCTCCCAAAATAGATAGGCTTGATCCCAAATCGCATTTAGAGATTGACATGAACGAGGAAGTTGATAGGCTTGATACCAAATCGCATTTAGAGATTGACATAAACGAGGAAGTTGATAGGGTTGATACCAAATCGCATTTAGATTTTCAGTTGAACCGCTCTTGTGATCGTGTAAAAGATAGGGTTGGTTCTCAAATGGATCTTAAGATTGAGAGTAACTCCCCGTCTCCTGAATGGGAAGTTGATAGGATTGATCCCAAATCGCATTTAGAGATTGATATGAACGAGGAAGTTGATAGGGTTGATACCAAATCGCATTTAGATTTTCAGTTGAACCACTCTTGTGATCGTGTAAAAGATAGGGTTGGTTCTCAAATGGATCTTAAGATTGAGAGGAACTCCCCGTCTCCTGAATGGGAAGTTGATAGGCCTGATCCCAAATCGCATTTAGAGATTGATATGAACGAGGAAGTTGATAGGGTTGATACCAAATCGCATTTAGATTTTCAGTTGAACCGCTCTTGTGATCGTGTAAAAGATAGGGTTGGTACTCAAATGGAACTTGAAATTGAGAGGAACTCCCCGTCTCCTGAATGGGAAGTTGATAGGATTGATCCAAAATCACATTTAAAGATTGAGATGAATCCCTCTTGTGATCGTAAAAGAGATAGGGTTGATCCTGAAATGCATTTGAAAATTCAGTCTCCTACTAAGCAGGAAGTTGATAGGAATAAAACTAAATCACATTTAAAGATTGAGATGAACTCTCCTGAATGGGAAGTTGATAGTATTGATATCAAATCGCATTCAAAGATTGAGATGAACTCCCCTTGTGTTCATGAAAGAGATAGGGTTGATCCTGAAATGCATTTAAAAATTGAGTATTCTAAGCAGGAAGTTGATAGGATTGATCCCAAATCGCATTTAGAGATTGAGATGAACTCTCCTGAATGGGAAGTTGATAGTATTGATATCAAATCGCATTCAAAGATTGTGATGAACCCCTCTTGTAAACGTAAAATTGATAGGTTATGTCCCAAATCGCATGTTAAAAATGCGATGAAATCCCCGTCTCCTAAGCGGGAAGTTGATAGGATTGATCTCAAATCACATTTAAATATTGAGAAGAACCCGGCATCGTATGATCGTGTAAGAGGTATGGTTGAGATGAATTACTCTCCTGAACAAAAAATTGATAGGATTGGTCCCAAATCACGTTTGCAGATAGAATACGGTACTAGTCTTAAGCAAGAAACAGTTTATAAGCAATCAATCGCCGCAAAGTCACACCTTGAAGTTAAGATGAATCCCTCTAGCAACCAAGAAAGAGATGAAATACCATTGATTGACCCTGAATCGCGCTTGAATAAGATTGAAATTGGTACTACTTCTGAAGGGAATGGTGTTGCCTTTAATCACACTCAAAAACATTTTAAAGTTGGACTAAATTCATGTACACAACTAGAAATAGAAAAGATCTATCCTCAATCCCATGTTAAAATTGAGATGAATCCCTCTCCTGAACGAGGAGATGCTCCCCCATATAACTATGATGAAGAAACAGATGTAAGTCCGCACCTGGTGTACAAAAACGGTCAGCTGTGGCCGCAAGACCTGCCTTTTCCCAGCTCCGACAAAGATTGTGTTGTTTATGATCAAAATGGTGAGAATGGCTTTTCACCCGACAACGCTGCCATTCAGTTTCCCGCTTATTTCAAGGATTCTAAAGGCATGTCGCACGGCGTTTTCGGCCAGGGCAAGGTGCTACCCGACATCATCCAGCACGGCAGAAGTGCCGGCATGCCGCTTTACGTGCGTTGTCCCATTTGCCAAAAGGAGTTCAAGCAGAAATCGACCCTGTTGCAGCACGGCTGCATACACATTGAGTCGAGGCCTTATCCGTGCGGCGAGTGTGGCAAGCGATTTCGCCAGCAGTCTCATCTCACACAGCATCTCAGGATACACACAAACGAGAAGCCGTACGCCTGTGTGTACTGTGGCCGCAACTTTCGCCAGCGCACCATTCTCAACCAGCATGTGCGCATTCACACGGGCGAAAAGCCCTACAGGTGCGGCCAGTGCGGCAAAGACTTCAGGCAGAAGGCCATCTTGGACCAGCACACGCGCACACACCAGAGCGATCGGCCCTACTGCTGTCCTATGCCCAACTGTCGGCGGCGGTTCGCTACCGAACACGAGGTGAAACGACACATCGACAACCACATGAACCCGCACGCCAGCAAACGCCGTGTGCCCGAAATAAAACAACGACCCGCCTCCCCACCGCTCTCCCCACCCATGCAACCCCTCCCCCCACCGCCCACCATCAAGCCCGAACTCTACTTCCCACAATGCTCCTCCCCCCATCCACAGGCCATCACCCCTCCCACCCCCGTCCAACAGCAGGACTTCAAACCGCCCGTGCAACAGCTGACCGCCGCTGTAGTGCAGTGA
Protein Sequence: MLYKDQMEAPRNGGAMGPVGLTNGTVAPWGPSEPYPAASPTLIQQNSAAASPTLIQNGAPSPQSASVTVTVQTNQDQQSHHSLSPPSNVQSPVAAYQQQSQTDQHASQQVNGGGAADDDTVGQQQQQSAASTPHSPALAQSDTGGDQQQQQHPSVATERPLFDTPYYRNGGGGGTAAAPPPPPPHMLTTNSFMTYLKQQHQHQQTQQQQHNPNQHSQHNQQQQQQQQQGVVMLTQLQAADPGPDFAAGMPDLLVAQQNNKIISKGNQHSDLRLFKCVTCGKDFKQKSTLLQHERIHTDSRPYPCAECGKRFRQQSHLTQHLRIHANEKPFACVYCERTFRQRAILNQHLRIHSGEKPFACTQCGKRFRQKAILNQHVRTHQGEQPNALYLKSPPPPTHPRTVLMLSPKIDRLDPKSHLEIDMNEEVDRLDTKSHLEIDINEEVDRVDTKSHLDFQLNRSCDRVKDRVGSQMDLKIESNSPSPEWEVDRIDPKSHLEIDMNEEVDRVDTKSHLDFQLNHSCDRVKDRVGSQMDLKIERNSPSPEWEVDRPDPKSHLEIDMNEEVDRVDTKSHLDFQLNRSCDRVKDRVGTQMELEIERNSPSPEWEVDRIDPKSHLKIEMNPSCDRKRDRVDPEMHLKIQSPTKQEVDRNKTKSHLKIEMNSPEWEVDSIDIKSHSKIEMNSPCVHERDRVDPEMHLKIEYSKQEVDRIDPKSHLEIEMNSPEWEVDSIDIKSHSKIVMNPSCKRKIDRLCPKSHVKNAMKSPSPKREVDRIDLKSHLNIEKNPASYDRVRGMVEMNYSPEQKIDRIGPKSRLQIEYGTSLKQETVYKQSIAAKSHLEVKMNPSSNQERDEIPLIDPESRLNKIEIGTTSEGNGVAFNHTQKHFKVGLNSCTQLEIEKIYPQSHVKIEMNPSPERGDAPPYNYDEETDVSPHLVYKNGQLWPQDLPFPSSDKDCVVYDQNGENGFSPDNAAIQFPAYFKDSKGMSHGVFGQGKVLPDIIQHGRSAGMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCGECGKRFRQQSHLTQHLRIHTNEKPYACVYCGRNFRQRTILNQHVRIHTGEKPYRCGQCGKDFRQKAILDQHTRTHQSDRPYCCPMPNCRRRFATEHEVKRHIDNHMNPHASKRRVPEIKQRPASPPLSPPMQPLPPPPTIKPELYFPQCSSPHPQAITPPTPVQQQDFKPPVQQLTAAVVQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -