Sfur003810.1
Basic Information
- Insect
- Sogatella furcifera
- Gene Symbol
- -
- Assembly
- GCA_014356515.1
- Location
- chr10:7662348-7673259[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 26 0.0042 0.22 12.3 2.6 1 23 340 365 340 365 0.95 2 26 0.0016 0.084 13.6 1.9 1 23 418 441 418 441 0.95 3 26 0.0091 0.47 11.2 0.6 2 22 451 471 450 471 0.95 4 26 1.3 69 4.4 2.1 2 20 480 498 479 500 0.91 5 26 5.1 2.7e+02 2.6 0.5 1 23 523 546 523 546 0.95 6 26 0.00031 0.016 15.9 0.1 2 23 582 603 581 603 0.95 7 26 0.0032 0.17 12.7 3.7 1 23 609 631 609 631 0.98 8 26 0.02 1 10.2 1.0 1 23 639 661 639 661 0.96 9 26 0.0015 0.077 13.7 5.3 1 23 669 691 669 691 0.99 10 26 0.001 0.052 14.2 0.7 3 23 728 748 727 748 0.97 11 26 0.0071 0.37 11.6 0.4 3 20 763 780 761 780 0.95 12 26 0.0065 0.34 11.7 0.2 2 20 815 833 814 835 0.94 13 26 0.7 36 5.3 0.2 3 21 854 872 852 873 0.94 14 26 0.0076 0.39 11.5 0.3 2 21 889 908 888 909 0.93 15 26 2.1 1.1e+02 3.8 0.5 2 22 930 950 929 950 0.89 16 26 0.019 1 10.2 1.1 2 21 969 988 968 989 0.93 17 26 0.00091 0.047 14.4 0.8 1 22 1004 1025 1004 1025 0.96 18 26 0.62 32 5.5 0.0 5 19 1047 1061 1046 1063 0.92 19 26 3.4 1.8e+02 3.1 2.0 2 21 1092 1111 1091 1112 0.78 20 26 0.21 11 6.9 0.3 1 19 1172 1190 1172 1193 0.93 21 26 0.0017 0.087 13.5 1.0 2 23 1239 1261 1238 1261 0.90 22 26 0.0005 0.026 15.2 0.2 2 23 1275 1296 1274 1296 0.94 23 26 9.4e-06 0.00048 20.6 1.2 1 23 1342 1364 1342 1364 0.98 24 26 0.011 0.59 10.9 1.8 1 23 1389 1411 1389 1411 0.97 25 26 0.76 40 5.2 1.6 2 23 1445 1465 1444 1465 0.95 26 26 0.39 20 6.1 0.5 1 21 1518 1538 1518 1542 0.91
Sequence Information
- Coding Sequence
- ATGACTGAACAGAACGGAACAGGCAGGGAACAGTTGGTTGACCGGAGCGATGAATTGCCTAAGAAGATCTGCGTTGGATGCGTGCATCAGGTCGATTCATGGCATAAGTTCAAAACAGCCTGCGACACCGCTCAGACCAAACTCAGCTCCTGGATTAAGACTACTGAACGCTATAAGTCAGCTACCAGTGAGATAATAATCAAACAGGAGCCCATCGATGACTTGGATGATGACGTCATTATATGCTGCGATGACTCCAATGACGCCACACCCTACGATGTCTCTTCTCCATCACCAACCTTTGAGACAGAGAGGAGCGCACCTGAGCCTGCCACATGCGAGACTGAAAATCATCAACAGGACATCAACTTAGAGGTCACAAGTGCACAGCCGATTGTGGACAAAAGTACAGAGAATGAGGAAAATGTTGAGATGCGTTCTTCTCCCGGTCGGGAAAAATCGCTTCTGGAACAGGCGTTGGAAAGAGAAGTTCCGGAAACAATTGACAAAACACATCTTACTGAAGATGAGTTGATGATGGCTGATTTCACCTATAGGTACTATGATTTAATCGTGAAGCAAGAACCAATGAGCGATGAGGACTACGAGCCTACGCCTATGACAAAGGAGCAGATCGACGGGGTCGCCGATCAACCAGACATCGACGTAAAACCGAATATTGGCGAATTGATTCGAAAAGGAAAACGAAAGTACCGTCGTCGCCAGATAAAGACTTCTGGCAGTATACCTTGTGAGCCATGTGGTTACACTTACCCAAATTATCTCAAATTTCTACGTCACTGCAAGTCTCACAAACACCAGACCAACGTGAGGATCTTCGAAAAAACAGGTAAACCCGTCAATGAAAATCACATCCCCGAAAAAACCTCCCCTACGAAATTAGACAACGTTAACTCTACCTCAGTTTCAGTAGTCGGCGAAGTAAACATAAACCCAACCCCAGTTTCAGAAGTCGGTGGAGTAAAGTCTAATCCTTCGTCAGTTTCAGTAGAATACCATACGTGTCCTATTATGAGCTGTAGTAAAGCGTTCAAATATAGGCGAAACCTACAATCTCATGTGAAACAATACCATGCGCTCAATTTGAAGGATTTGGAAAGATCTAGGGAGCCTGCAGATGAGACGTACATACCTCCTGAGCCTACTCCCGAACCTCCTTCAAAGGAAACCCCCACGTTAGAATTGGACAGTCTTGAAGCTGAATTGAATAATGGTGAGAAAACCACGGTTTACTCTTGTAAAGTTTGTTCGAAAGAGTTTGGGTATAAACGTTCGTTGAACCAGCATCTTTTCATCTTCCACAATATAACACCCCCCACTCCACGATTGAAATGTCCCAGATGCTCGAAAATATTCCAGAAAATGACCGGATTGAAATCGCATATGAGATCGTGCGGTGTTCTTCTCAAATCGAAACGGTGTACGTATTGTGGAAAAGATTCCGCCTCCTATAAGGACAATTGCAGGCATAAGAGTGTGTGTCCTATGCGGTATGCACCTAAAGTGACGGCGGCCAGAGTTGTGGCTAAACCAGAAAATGCTACTTATTCTTGTAGGTTTTGTGATATTTTGTTTGAGGCACGTTCGATCTATACAGATCATATGGAAACCTATCATGCTGGTGAGCCAGTTGATGTGAAAGATGAAACAATTGGTTCAGAAGACGTCACTATGATTGATGAAAGCGAAAATACTGCAGTTGAAGTGAACAATGGAGAAGTGCCTTGTAAATACTGTTTCAAATCGTTTCCCACAATCAACGAATTGAATGTACATATGGAAGAACACTCCAATGATAAATCCTTCGTATGTAAGATTTGTAAATTAGTTACAACTACAGTAAGATATTTCCACAATCATATGCGCACGCATTTTGTAACAAGTAGCAAACAGTATCTGTGTTGGACCTGTTACACACCATTCAACAATCGGAGAGAACTCAGCGTGCATAAGAAGATGCACGTAAATATCACCATGAGAATATACAGGTGTACAGTGTGCAAGCACTCATTCCATGATTCAGCTTCTTTACAGAATCATAAGCTAACACATTTCCACGGGTTTGAGAGTGATGCTACCAGTGACAAATCCAAACAAACGCTGCTGAAAACAATTGAAAAAGATGAAAGAGAGGCTGAGAAAATTGAAGCTGGATTATTATGTCAAGTTTGTAAGAAGGAGTTTTCCACTCAGGAGGCATTAGACAAGCATAGTCGTCTTCATAAACCTGTCAACTCTGAAGTTATCAAAAAACTAGTTCAAAATTGTCCCACCTGTAACAGAATATTTAAATCTCGCCTAGAGCTACGTAATCATCAACCGTTTTGTAAACCAATTGATGGAGAAACACAAACCAATGTTCCCATGCCGAATTTTAAGAAATCTTTCTACAAAAAAGTGCCTCATCCACACCAGAGAGTGCAATGTAACAAATGTGGTAGTTCGTTTTCTAAATTTGAGGGTTTGAGAAAGCATGTAGCCTTGAAAAGATGTCCACTGGTGAGACACAACTACGACAAGGTTAAAAAGTCCTACGGTTGCCGCTATTGCAAAAAGAAGCTGTCTACAATCGTCGGTCTCTATAAACATCTCAACGCCTGTAAAGTGTTTATCAGCAAGTATGGCAAGAATTACCACTCGAATCAGTGTCCCATATGTCATAAACAGTTCTCGTCATTGGGAGTACTCTACAATCACGCGAGATTCTGCTCTGGATCCAGTACTGCAATTAGTAAATTGATTAAACAAGAGCCAGGAGTTTTCAAGAGTTGTCAAAAATGTCAGGAAAAGTTTGACACCGACGAATTATTCGATGAACATGTTAAAACTTGTAATAAATCGAGTGTTGAAGATTGTGTTGAGACAAAAGAAAAGGTTGAAAAAAGTTGCACCTACTGTAATTTGAGTTTTGATGACTTGTCAAGTTACAAGCTACATAAGAAGTATTGCTCCAAGGGAGAGAGTTCCAGTTCAAATCCAACCGGTTCGTTCAGATGTGAAGGCTGTTCTAGAGTATTCTTCTCTCAAGACAGGTTGAGGTCGCACTTGAAAACTTGTAAATTCTATCGGCAAACACCCGTTGTAATGCTCACTAAACAAACAGTGATAGAGCAATGTGTGTGTGGAGTTGTGTTTACATCTAGATCGGCGCTCGATGCTCACAAGGTGAATTGTGCATCGGCTAAAGAATCGGCGACAATTGATATAACTGGAGACAACAGTGTTTCGGCTTCAACCTCACACAAAAAATGGGAGTGTCAGTATTGTCATGAGAAATTCAATAAGCATCAGGTCCACAACAGCCATATGCGCATTTGTAAGGTGAGACAGGAACACTTGGAGAAGAAAAATTCTCCTCAACCTCAACCACCTAGACAAGCCAGATCATCGAAACCCTCTTTCTCCCCCTCCGCGTCATCTTCTGTTTCTAACCATCTTCCTCCTCCTCCCCCCATGATACCTCTATCATCACTTGCATCCTCGTCGCCTAATTTCATGTGCTCTGTGTGTAACTCGATGTTCGCCACCGAAAATGATTTAATAATGCACAACTGTTCACCCACCACCATCAAACCAGACCCTGTTGAAATCACCGTGGAACCCGATAATCCCCTCAATTTCAACGATTTCAGCGATTTCGGCTTTCATTACATGGATGACATCTCCCAGCGAGAACTAACCCAAAGTTCATTGAAGTGTATGCCTTGTGACAAAGTGTTTTCGAGCTCGGTGACTCTCAACAAACATAGGAAACTGTTTCATCCCAATGATCCCAATCTGTGGAAAAACGATGGTACACTACAGTGTCCCAAATGTCCACGTTTGTTCAAAGACCAGACAAGTATGGCGCGTCATATGGGCTGGCATACACGCTCAGAGGATACTCCAGGACAACAAATTACCTCTCCACAACAAGTTGTTAATCAGAACATTTATTTGCAATCTCCACCTTCCTCATCATCTTCACCAAATGTGCCTCCATATGTGGAACATAATACTCCATACTCGTGTATGTATTGTAACAGAGCGTTCACAGGTAAAGGACAGTTACAGAATCATTTGAAAACCCACACACAACCGTATCCTCAATCTGGAGGCAATCCTGCGGAAAATGACTCTCAGAAACCTACTACAACACTCACCTACCGTTGTAGATTTTGCTCGAAACGGTTCCGAGATAAAGCAGTCATGTTAGAGCATCAAAATCTTCATAAAACTATTTTAGCTGCCGCATCGTCTACTGTTACGTCGACAACTTCCGCCCCTCCCAAACCAAAACCAGCCGTAGAGCCAGTGCCCAAGTATCTAGTGTCTTGTAATCTGTGTCACAAAATACTATCGTCCAGCTCAGTGGCCAAACACAAGAAAATGCACGAGGTGAAAGGCAATAGATCATTGACGGATCATATGTCCACGGAACATGCGGGATATTCAAAATTGGACGTGGTGGAGATTGAAGATGATGATGACGTCATCTTTCGGCCAAATAATGAACCAAATCCGAATTCTGTGAACACCAGTGGTGTGCTGTATAAATGCGAAATTTGCAATCTCGTCTGGCATCGTAAAAGTGATTACTTGCAACATGTGAACGATCCCTCGCATAGGGAACTCACTAATCGGCTTTCGGCCATTTTGAATCGTTCCAGTGCCCTGGCAAAACTGCCCAGTTGTTAG
- Protein Sequence
- MTEQNGTGREQLVDRSDELPKKICVGCVHQVDSWHKFKTACDTAQTKLSSWIKTTERYKSATSEIIIKQEPIDDLDDDVIICCDDSNDATPYDVSSPSPTFETERSAPEPATCETENHQQDINLEVTSAQPIVDKSTENEENVEMRSSPGREKSLLEQALEREVPETIDKTHLTEDELMMADFTYRYYDLIVKQEPMSDEDYEPTPMTKEQIDGVADQPDIDVKPNIGELIRKGKRKYRRRQIKTSGSIPCEPCGYTYPNYLKFLRHCKSHKHQTNVRIFEKTGKPVNENHIPEKTSPTKLDNVNSTSVSVVGEVNINPTPVSEVGGVKSNPSSVSVEYHTCPIMSCSKAFKYRRNLQSHVKQYHALNLKDLERSREPADETYIPPEPTPEPPSKETPTLELDSLEAELNNGEKTTVYSCKVCSKEFGYKRSLNQHLFIFHNITPPTPRLKCPRCSKIFQKMTGLKSHMRSCGVLLKSKRCTYCGKDSASYKDNCRHKSVCPMRYAPKVTAARVVAKPENATYSCRFCDILFEARSIYTDHMETYHAGEPVDVKDETIGSEDVTMIDESENTAVEVNNGEVPCKYCFKSFPTINELNVHMEEHSNDKSFVCKICKLVTTTVRYFHNHMRTHFVTSSKQYLCWTCYTPFNNRRELSVHKKMHVNITMRIYRCTVCKHSFHDSASLQNHKLTHFHGFESDATSDKSKQTLLKTIEKDEREAEKIEAGLLCQVCKKEFSTQEALDKHSRLHKPVNSEVIKKLVQNCPTCNRIFKSRLELRNHQPFCKPIDGETQTNVPMPNFKKSFYKKVPHPHQRVQCNKCGSSFSKFEGLRKHVALKRCPLVRHNYDKVKKSYGCRYCKKKLSTIVGLYKHLNACKVFISKYGKNYHSNQCPICHKQFSSLGVLYNHARFCSGSSTAISKLIKQEPGVFKSCQKCQEKFDTDELFDEHVKTCNKSSVEDCVETKEKVEKSCTYCNLSFDDLSSYKLHKKYCSKGESSSSNPTGSFRCEGCSRVFFSQDRLRSHLKTCKFYRQTPVVMLTKQTVIEQCVCGVVFTSRSALDAHKVNCASAKESATIDITGDNSVSASTSHKKWECQYCHEKFNKHQVHNSHMRICKVRQEHLEKKNSPQPQPPRQARSSKPSFSPSASSSVSNHLPPPPPMIPLSSLASSSPNFMCSVCNSMFATENDLIMHNCSPTTIKPDPVEITVEPDNPLNFNDFSDFGFHYMDDISQRELTQSSLKCMPCDKVFSSSVTLNKHRKLFHPNDPNLWKNDGTLQCPKCPRLFKDQTSMARHMGWHTRSEDTPGQQITSPQQVVNQNIYLQSPPSSSSSPNVPPYVEHNTPYSCMYCNRAFTGKGQLQNHLKTHTQPYPQSGGNPAENDSQKPTTTLTYRCRFCSKRFRDKAVMLEHQNLHKTILAAASSTVTSTTSAPPKPKPAVEPVPKYLVSCNLCHKILSSSSVAKHKKMHEVKGNRSLTDHMSTEHAGYSKLDVVEIEDDDDVIFRPNNEPNPNSVNTSGVLYKCEICNLVWHRKSDYLQHVNDPSHRELTNRLSAILNRSSALAKLPSC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -