Basic Information

Insect: Sogatella furcifera
Gene Symbol: -
Assembly: GCA_014356515.1
Location: chr5:7705942-7715496[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00067 0.035 14.8 4.0 1 23 191 213 191 213 0.99

2 11 8.9e-06 0.00046 20.7 0.1 1 23 219 241 219 241 0.96

3 11 1.2e-05 0.00063 20.3 6.8 1 23 247 269 247 269 0.98

4 11 4.8e-09 2.5e-07 31.0 2.2 1 23 275 297 275 297 0.98

5 11 2.1e-05 0.0011 19.5 4.7 1 23 303 325 303 325 0.99

6 11 1.9e-07 9.6e-06 26.0 4.3 1 23 331 353 331 353 0.98

7 11 2e-05 0.001 19.6 0.4 1 23 358 380 358 380 0.99

8 11 1.6e-05 0.00082 19.9 5.3 1 23 386 408 386 408 0.98

9 11 7.3e-05 0.0038 17.8 4.8 1 23 414 436 414 436 0.98

10 11 7.1e-08 3.7e-06 27.3 3.1 2 23 443 464 442 464 0.97

11 11 1.6e-05 0.00083 19.9 2.5 1 23 470 492 470 492 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00067	0.035	14.8	4.0	1	23	191	213	191	213	0.99
2	11	8.9e-06	0.00046	20.7	0.1	1	23	219	241	219	241	0.96
3	11	1.2e-05	0.00063	20.3	6.8	1	23	247	269	247	269	0.98
4	11	4.8e-09	2.5e-07	31.0	2.2	1	23	275	297	275	297	0.98
5	11	2.1e-05	0.0011	19.5	4.7	1	23	303	325	303	325	0.99
6	11	1.9e-07	9.6e-06	26.0	4.3	1	23	331	353	331	353	0.98
7	11	2e-05	0.001	19.6	0.4	1	23	358	380	358	380	0.99
8	11	1.6e-05	0.00082	19.9	5.3	1	23	386	408	386	408	0.98
9	11	7.3e-05	0.0038	17.8	4.8	1	23	414	436	414	436	0.98
10	11	7.1e-08	3.7e-06	27.3	3.1	2	23	443	464	442	464	0.97
11	11	1.6e-05	0.00083	19.9	2.5	1	23	470	492	470	492	0.99

Sequence Information

Coding Sequence: ATGGATGGGACTGAAATAGATAATATGGAGGCGGAAAATAGTCAAGATGATAATGATCCACTTGGACCTGAAGACTTTCATACGATTTTCATTAAAGAAGAGCACATTTCCTCTGATGAAATGATAGACGAAGAAGAGGCTACTGAGGAGAACACAGATCCCTTACAACGGAATGAAGGTTCTCCTAGTTTGACCGAGGAGATCAAGACAGAAGCATCTTTAACAGCATTGAGTGTTGTTAAATTAGAGGAGGACCTGGGGGAAAACAAAGACCTAATTTCGTCAGATGCTGTCAGTCAATCTAATAATGATGCTGATGGTCCCGACAACAGTGTTGTGTGTGGTTCTGGTGCAATTGAAGGACTCTATGGTATGACTCTGTTGGAGTCCAACATGGAAGGATCGGCTTCAGAATTATGTGATGATGATCATCTAAAAGGCGAATCCAAAAAATGTTTTCCTGATGTTGATTTGTCAAGTGGTCCCAGCACCTGTGTTGTTAGGAATGAACAATTCGACAGTAAATGTTATGTGATTAAACATTTAGAAACCACCACCGGTGAGAAATTTTATAAATGTTATCATTGTGATGCATATTTCTCTCATAAACCTATGTTGGATGAGCACATCAAGACTCACAATGGTAAAAGTTCTTACTTGTGTGAATTATGTGGCGAATCTTTTCCAGAAAATGCCCATTTGATTGTCCACATTAGATCTCATACCGGTGACAAACCTCACAAGTGTGAATTTTGTGACAAAAGTTTCTCGCACAAGAAGAGATTGGTAGAACATATGAGGACACACACTGGTGAGAAGCTTTACAAATGTAAGTTTTGTGACAAGAGCTTTTCTCAAAATAGTAATTTGACTGTTCATATGAGAGCTCACTCTGGCGAGAGGCCTTACAAATGTGCACATTGTGACAAGAGCTTCTCATATAAAAATCATCTGCCCGTTCACATTAAGACGCACAGTGGGGAAAAGCCTCATACGTGTGAGATTTGTGGAAAAAGTTACACACAAAAGAAACATTTGACAGTACACATGAAGATTCACACTGGTGATCTTTTCAAATGTGAGTTTTGTGAGAAGAGCTACCCAGACGAGACTAAATTAATCATTCATATTAGGTCTCACACTGGGGAGAGGCCTCATAAGTGTGACTTTTGTGAACAAAGTTTCTCCGATAAGCGCTACTTGACTAAACATTTAAAAACTCACAATGGTGTGAAACCTCACAAATGTAAGATGTGTGAAAAACGTTTTGCATATAAGAGCTATTTGGATCTTCACACTAGGACTCACACTGGTGAAAAACCTTGTAAATGTGAGTATTGTGATAAAACTTTCGCTCAAAAATCCCAGCTGGTTTCCCATATCAGGACTCACACTGGTGTAAGGCCTTACAAGTGTGGTCATTGTGATGAAGGCTTCTTGAATAAGAAATCCTTGATTCGTCACATGAAAACTCACTCATAG
Protein Sequence: MDGTEIDNMEAENSQDDNDPLGPEDFHTIFIKEEHISSDEMIDEEEATEENTDPLQRNEGSPSLTEEIKTEASLTALSVVKLEEDLGENKDLISSDAVSQSNNDADGPDNSVVCGSGAIEGLYGMTLLESNMEGSASELCDDDHLKGESKKCFPDVDLSSGPSTCVVRNEQFDSKCYVIKHLETTTGEKFYKCYHCDAYFSHKPMLDEHIKTHNGKSSYLCELCGESFPENAHLIVHIRSHTGDKPHKCEFCDKSFSHKKRLVEHMRTHTGEKLYKCKFCDKSFSQNSNLTVHMRAHSGERPYKCAHCDKSFSYKNHLPVHIKTHSGEKPHTCEICGKSYTQKKHLTVHMKIHTGDLFKCEFCEKSYPDETKLIIHIRSHTGERPHKCDFCEQSFSDKRYLTKHLKTHNGVKPHKCKMCEKRFAYKSYLDLHTRTHTGEKPCKCEYCDKTFAQKSQLVSHIRTHTGVRPYKCGHCDEGFLNKKSLIRHMKTHS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -