Basic Information

Insect: Sogatella furcifera
Gene Symbol: ZNF236
Assembly: GCA_014356515.1
Location: chr10:20446075-20477815[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 6.7e-05 0.0035 17.9 0.4 2 23 285 308 284 308 0.96

2 18 0.2 10 7.0 0.3 3 23 316 336 314 336 0.92

3 18 6.6 3.4e+02 2.2 4.8 2 21 349 368 348 370 0.89

4 18 4.6e-05 0.0024 18.5 1.9 1 23 392 414 392 414 0.97

5 18 1.2e-05 0.00064 20.3 1.0 1 23 420 442 420 442 0.98

6 18 0.31 16 6.4 0.7 1 13 448 460 448 462 0.92

7 18 1.5e-07 7.7e-06 26.3 0.9 1 23 469 491 469 491 0.96

8 18 1.1e-05 0.00056 20.4 2.3 1 23 497 519 497 519 0.99

9 18 1.3 66 4.5 0.8 3 14 526 538 525 541 0.79

10 18 1.2e-05 0.00064 20.3 2.7 1 23 557 579 557 579 0.99

11 18 0.00011 0.0058 17.2 1.1 1 23 585 607 585 607 0.99

12 18 1.6e-05 0.0008 19.9 3.5 3 23 615 635 613 635 0.98

13 18 0.00012 0.006 17.2 4.8 1 23 641 663 641 663 0.98

14 18 5e-07 2.6e-05 24.6 1.7 2 23 684 705 684 705 0.98

15 18 0.00013 0.0067 17.0 4.9 1 23 711 733 711 733 0.99

16 18 5.2e-06 0.00027 21.4 1.1 2 23 740 761 739 761 0.97

17 18 8.3e-05 0.0043 17.7 0.6 1 23 767 789 767 789 0.97

18 18 6.4e-07 3.3e-05 24.3 0.5 2 23 900 921 899 921 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	6.7e-05	0.0035	17.9	0.4	2	23	285	308	284	308	0.96
2	18	0.2	10	7.0	0.3	3	23	316	336	314	336	0.92
3	18	6.6	3.4e+02	2.2	4.8	2	21	349	368	348	370	0.89
4	18	4.6e-05	0.0024	18.5	1.9	1	23	392	414	392	414	0.97
5	18	1.2e-05	0.00064	20.3	1.0	1	23	420	442	420	442	0.98
6	18	0.31	16	6.4	0.7	1	13	448	460	448	462	0.92
7	18	1.5e-07	7.7e-06	26.3	0.9	1	23	469	491	469	491	0.96
8	18	1.1e-05	0.00056	20.4	2.3	1	23	497	519	497	519	0.99
9	18	1.3	66	4.5	0.8	3	14	526	538	525	541	0.79
10	18	1.2e-05	0.00064	20.3	2.7	1	23	557	579	557	579	0.99
11	18	0.00011	0.0058	17.2	1.1	1	23	585	607	585	607	0.99
12	18	1.6e-05	0.0008	19.9	3.5	3	23	615	635	613	635	0.98
13	18	0.00012	0.006	17.2	4.8	1	23	641	663	641	663	0.98
14	18	5e-07	2.6e-05	24.6	1.7	2	23	684	705	684	705	0.98
15	18	0.00013	0.0067	17.0	4.9	1	23	711	733	711	733	0.99
16	18	5.2e-06	0.00027	21.4	1.1	2	23	740	761	739	761	0.97
17	18	8.3e-05	0.0043	17.7	0.6	1	23	767	789	767	789	0.97
18	18	6.4e-07	3.3e-05	24.3	0.5	2	23	900	921	899	921	0.97

Sequence Information

Coding Sequence: ATGGAAATGGATACAATTGGTGAGGATGAGATTTGTCTCTTGGCTGATACAAATCAAGTGGTTTTGTCATCAGATTATCTCACATTGAATAGAATACCGTATCTCTTTACCCAGGATACAGCTGTCGCCGTTCCAGTGGAGCATACATTGGAAGACATGGGTACCACTCAATATTTTCCTTTGCAAACCTTCACAGGTGCAGGTCTCGTTGATGGTCAACTTGTATCAAACGAGACAACATTTCTCCTCGATCCATCTCAGATAATGTTTTTGACAAACGGCACACATATTCTGAAAGCTATTCAAACGGCTCCCAACCAAGAGTTAACAAGCACCGATGGTGATAGTTTATATACATCTGCTGTGACTGCTGATCCGAATTTCATGAAAGTGGCCGAATTTGTGATGCCAAGTAGTGATCTAGTCGATGCTATTCCACAACAAACTATTGCTGTTGACGCATTATCAAGTACCGATGACGCCGGTTATCATCCACTCAATGTGACGGACGATGCAGGCCAACTTCTGCTGGAGAGTGCGACAATTCAGCCCATGGAAGAAGCCGTGCCCGTTTTGCAGCAACAAGACTACGAACAGCAAATTATTCAACAACCAGTACAACTGTTGGGGGGTGAAGGGGGATTCGTAGTGGAAGGAGGAGGAGGAGGAGCAGAAGAGGGTAATAGGCAAATTGATCTAGAAGTAGTCCCTCAACTGGAAGCTGCAACTGAGGCCGAGCAAGCCTTACAACAAAACCCAATTTCACGAATTTGGTCGGACATGGATGTTTGTCCACCGCTCAGGAAGTCGAATCTGTTACTGCATGAAGTAACCCATGACCCCGATAACCTGACTTGTCCAATCAAGGACTGCTTGAAGCGATTCAATCGGCAGGCCAGTCTCAAAGCTCACCTCAACTCGCATCAACAGGAAGAGAGTCTCTTCTGCACTGAATGTGGCGATGAATTTAACAATCAGCTCCAACTGGATAAGCATGCAACAGAACATTACCAAGAATGGATCAAACCAGCTGCGAAAATCCACAATTGTATTCACTGTGGCAGACGTTATGGCAAGGAGTCTGTTCTCAAGGAACACATGAAGTGTCATTATAAAATGAAGACGTCGATTGGAATGCGAAAGCCGAAAAAGAAGAGACGGGGGATTTTTATGCATGAGTGTGAAACGTGCCAAAAGGGTTTCCAGAAGCCCAGTCAGCTGATAAGACATAAGCGAATACACACTGGCGAAAAGCCATTCAAGTGTAATGTTTGCTCAAGGGCATTTAATCAAAAAGGTTCGATGCAAATCCACATGTTGAAACATTCTGGTGACCGTCCCTACCAATGTGAATTTTGTGACGCGAGATTTAGCCAGAAAGTTTCTCATGTAAGAACTATGGCCCACGCATGTACTTACTGTGGAAAAGAATTTAAGAAACCATCAGATCTAGTCAGACATATTCGTATTCACACCCATGAGAAACCATTCAAGTGTGACCAGTGCTTTCGTTCGTTTGCTGTGAGGTCGACGCTCACCACTCACCTACGCACGCACACGGGCGTGAAGCGGTTCTGTTGCATCGACTGCAACAAAATGTTCTCCTCACAAGGAAGTATTATGGAGATGGTGAACGCCTCAAAATTGTGTGATGATAGAGAACGTCGTTTCAAGTGTTCATTATGTGATACCAGATTCTTCAAGCGTAACAACCTGAGAATCCATATGAGGATTCACACAGGAGAAAGGCCATTCAAATGTGATATTTGCTCCAGAGGGTTCATCACAAACACAGTATTGAAGAGCCATAGGAACACGCATTTTGGCCTGAAGAACTTTGGCTGTGAAGAGTGTGGGAAACATTTCACAACTAAGAATACGCTGACTAGACATAAGTTAACGCACAAGCCGGGCACGCCGTTCATTTGCCCTTACTGCAGTAAAAAATTCAAAACAAGGAGCTCGTGCAAAGCTCATATCAAGACGCATTCTACCCTTGCTATTGCTCAGAAACCAAACACGGCGAGCGTAACAGAGGTGCACCGTAACCGTTGCAAATTCTGTCCGAAGAGCTTCCGCAAGCCGTCCGACCTGACCCGGCACCTGCGCATCCACACCGGCGAGCGGCCCTACCAGTGCAGCCACTGCTACAAGAGCTTCACCGTCAAGACCACCCTCGACTCCCATCTCAAGACGCACACCAGCAGCGAGCAGCTCACCTGCCACATCTGCGGCTCAAAGTTCGCCACCAAGGGCTCGCTTACTGTGCATATGCGGCTGCATACTGGTTCAAAACCGTTCGTGTGTCCCGTGTGCGGCATGCGATTCCGCACGTCGGGTCATCGCAAGACGCACGTGGCGATACATGTGAAAGATGGCAGCTTGCCGGCCAATACTGACGTGTATAACTTTCAGCTGCAGCTGCAGCAGACACCGCAGCTGCAGAACGCAACGCAGCTGCAGAACGCAACGCAGGAGATGCAGCAAATGGAGACGGTTGCCATGGAGACGGCGTGCGGCATGCAGGGGGTTGGGGATGGGGAGGGTTTGGGTGCAGACGAGAATAACGCCGCGCTGTTTCAGATATTCGACCACCAGATACCCAATCTCGGCTGTGATGAAGGCTCGCCTCAGACTTTTATTCTGATTCCATCCAAAGTGAACACCGTAGTTGATAGTAAACCGAAAGAAGATCTTGTCTGCAATATCTGCTCAAAAGAATTTTCAAAGCCATCCGTCCTGACAAGGCACATGCGAACACACGCAGGCCAACGATCCGTCAAGTGTGATGTGAGTTGTTATCGATTTCTCTCTACATAA
Protein Sequence: MEMDTIGEDEICLLADTNQVVLSSDYLTLNRIPYLFTQDTAVAVPVEHTLEDMGTTQYFPLQTFTGAGLVDGQLVSNETTFLLDPSQIMFLTNGTHILKAIQTAPNQELTSTDGDSLYTSAVTADPNFMKVAEFVMPSSDLVDAIPQQTIAVDALSSTDDAGYHPLNVTDDAGQLLLESATIQPMEEAVPVLQQQDYEQQIIQQPVQLLGGEGGFVVEGGGGGAEEGNRQIDLEVVPQLEAATEAEQALQQNPISRIWSDMDVCPPLRKSNLLLHEVTHDPDNLTCPIKDCLKRFNRQASLKAHLNSHQQEESLFCTECGDEFNNQLQLDKHATEHYQEWIKPAAKIHNCIHCGRRYGKESVLKEHMKCHYKMKTSIGMRKPKKKRRGIFMHECETCQKGFQKPSQLIRHKRIHTGEKPFKCNVCSRAFNQKGSMQIHMLKHSGDRPYQCEFCDARFSQKVSHVRTMAHACTYCGKEFKKPSDLVRHIRIHTHEKPFKCDQCFRSFAVRSTLTTHLRTHTGVKRFCCIDCNKMFSSQGSIMEMVNASKLCDDRERRFKCSLCDTRFFKRNNLRIHMRIHTGERPFKCDICSRGFITNTVLKSHRNTHFGLKNFGCEECGKHFTTKNTLTRHKLTHKPGTPFICPYCSKKFKTRSSCKAHIKTHSTLAIAQKPNTASVTEVHRNRCKFCPKSFRKPSDLTRHLRIHTGERPYQCSHCYKSFTVKTTLDSHLKTHTSSEQLTCHICGSKFATKGSLTVHMRLHTGSKPFVCPVCGMRFRTSGHRKTHVAIHVKDGSLPANTDVYNFQLQLQQTPQLQNATQLQNATQEMQQMETVAMETACGMQGVGDGEGLGADENNAALFQIFDHQIPNLGCDEGSPQTFILIPSKVNTVVDSKPKEDLVCNICSKEFSKPSVLTRHMRTHAGQRSVKCDVSCYRFLST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -