Sfur002177.1
Basic Information
- Insect
- Sogatella furcifera
- Gene Symbol
- thap5
- Assembly
- GCA_014356515.1
- Location
- chr5:7217567-7244544[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 4.4e-08 2.3e-06 27.9 1.4 1 23 337 359 337 359 0.99 2 19 1.2e-06 6.1e-05 23.5 0.5 1 23 365 387 365 387 0.98 3 19 1.9e-06 0.0001 22.8 1.5 2 23 393 415 392 415 0.96 4 19 0.0019 0.098 13.4 2.3 1 23 421 444 421 445 0.93 5 19 0.00022 0.011 16.3 4.5 1 23 450 472 450 472 0.97 6 19 6.3e-06 0.00033 21.2 1.3 1 23 478 501 478 501 0.96 7 19 3.8e-08 2e-06 28.2 1.2 1 23 506 528 506 528 0.98 8 19 0.011 0.56 11.0 2.3 1 23 534 556 534 556 0.97 9 19 0.0059 0.3 11.8 0.4 1 23 562 584 562 584 0.95 10 19 0.00037 0.019 15.6 6.9 1 23 590 612 590 612 0.98 11 19 0.00019 0.0096 16.6 2.4 1 23 618 640 618 640 0.98 12 19 0.0003 0.015 15.9 0.5 1 23 646 669 646 669 0.98 13 19 0.0097 0.5 11.1 0.1 1 23 675 698 675 698 0.97 14 19 0.0041 0.21 12.3 1.7 1 19 704 722 704 725 0.95 15 19 4.4e-07 2.3e-05 24.8 0.1 2 23 730 751 730 751 0.97 16 19 0.01 0.54 11.0 8.2 1 23 757 780 757 780 0.96 17 19 0.0016 0.083 13.6 0.9 1 23 786 809 786 809 0.95 18 19 0.00068 0.035 14.8 1.2 1 23 815 837 815 837 0.98 19 19 0.0022 0.12 13.1 0.7 1 23 843 866 843 866 0.93
Sequence Information
- Coding Sequence
- ATGGACAGGTGTTGCGTAGCCTACGGCTGTCGGAATGTCCCGCAGGGCGACTGCGGAAGCGCGAATGTGATAACTTTTCATCAGTTCCCCAGCAATGCGGAGTTGAAAGAGAAATGGATTGAGGCCGTCAAAAGCTGGCAGCCCACCAAAGAGTGCAGACTGTGTAGCGATCATTTCTCGGCGGACTCATTTGAAGGCAAGGCGGGAAAGGTGCTGTTGAAAAAAGGTGCGGTGCCGTCTAAGTTCAAGCATTCGGTTACTTTGGATAAAAACAAGGTTGCTATCGAGGCGCTGCAAAAAGAGAATAGCGGCTTGAAAATGGTCACAGCCCGGTTGCAGAAAGAGTTGAAGGAGTCGGCCCGATCAATTGTTGAGGCCGAAATGAAACTGGCCGAGTATAAAAATGCCATTGAAAAACTTATGAATAAGTTGAGAAAGGTGAGAGATAGAAAAAAGATAGATGAAACAAAAAATGCCGACGGAGTGCCTTCTAAGGAGAACAGAAAAACCCCAAATGTAGCGGCAAACGTCAATAGAGAAGCCGCTCTGCATGAAAGTAGAACTATATCGAATAATGATCGTCTAAATTTCGAAGAAGATTCTCTGACTTACGACTGCCCGAAGAAGACTGATGAAATTAGTGAAAAAGTCATCACAGAAAAGTTGATATCCTCTGCTATCACTAACATGAACGAAGTTGGTCCGGACTCACTTGAGCTGCATAATGTACTGATTGTAGTTGATGAAAATGATTCTTCTGAAGATGAAACTGTGCCAGATCTTGATATGGATGTAGAAGATGATGATGATGATGATGATGATATTGAAATGTATCAATCTGGAGAATCTTTGTTGGAGACTGATGATGAAGACTACGATGATAATGGTGATGACGATGATGATGATGATGATGATGATGATGACGATGATGATGATGACTTGGAAAAAATAACGGAAAACCTGGGCAAAAAGAGAAGGCGAGGAAAAGGCAGGAAGCCGAAAGTTGTATATAGTTGCAAGTACTGTGACAAGGTGTTTCCGCGTCGCAGAGCGTTGGAGCGTCATCTGCGCACACACGACGAGGAGAAGGAGTTCGAGTGCGACGTTTGCGGCAAACGATTCGCGTTCGAAAAAATGCTGACTCGACACATGAACGTGCACGACACCAACCCCATACACTGTGACATCTGCGAGAAGACTTTCACGACGAAATCGCTGCTCACACTGCATTTACGTATGATACACACCGGCGAGCGGCCCTACCAGTGCGAGCTGTGCGATGAGAAGTTTTTCATGTCCAGCCATTTGAATGAGCACGCCGTCAAAGTGCACCATGCCGAGAAGATGTTCAACTGTGGAGAGTGCAACAAGTGCTTTTTCAAAGTCAAACAGTTAACGCAACACATGCGTCTGCATACGGGGGAGCGGGTGTACATGTGTGAGGTATGCGGCAAAAGTTACATCACACGAAGCCAGCTGGCCACGCACACACGCGCATGCCACGGAGAGAAGCCGTTCGTCTGTCAGCAGTGCGGCAAAGCGTTCACCACCAACTACAACCTCAATATGCACCTACGCACGCACAGCGACCACGCACCGTTCGCGTGCGATTTTTGCGACGCCAAATTTAAGACGCAGTTCAACTGTGCGGCGCATATGAAATTGCATGCCGGCGACAAACCGTTCCTGTGCGACTACTGCGACTCGCGGTTCGCGCTGAAAGAAGAGCTGACTGAGCATCGGGTGACGCACAACGCCGAGCGGCCGCACGAGTGTGACACCTGTCACAAACGCTTCACAAAGGCGACACTGTTGCGCACGCACCGTAAAACGCACACCGAGGAGCGACGCTACAAGTGCGACTTGTGCGATAAACAGTTCAAGGTACGCAAATCACTAGTCCTGCACCGGCGGTTTCACACGGGCGAAATGCCGTTCGAGTGCAGCATCTGTCAGGCGCGGTTCAACACCAAGACGGTCATGATCCGTCATATTAAAACAGTTCACGTGGGAGACATCCAGTTCCAGTGCGGCATCTGTGAGGACACCTTCGCCCAGGAAATACTGCTGACAGAGCATATTAAACAGGAACATCCGGGCAACGAGCCGTTCAAATGCGTAAAGTGCGACAAGCGTTTCAAGATGGCGTACGCGCTAGCGACGCACAACTGCCAGAAGGAACCGGAAGTATGTACAGTATGTGGCAAAACCTTTCCCTACAAGTCGGCCCTCGAACAGCACATGATCACACACAGCACGGAGCGACCGCATCGCTGTGAGCACTGCGGCAAATGCTTTAAATATCGCCAGTTCATGGTGAACCACGTCAAATCGCTGCACACCGGAGAGAACGTGTTCGCCTGCCAGACTTGCAACATGGTGTTCTCGGCCAAACACAATATGGTGCGGCACGTGCGTGATGTACACCAGGGCGAGAAGCGGTTCAGCTGCGACTTTTGCGGCCGCCTGTTTGCGCAGAAATCGGTGATGTTGACGCACCGACGCACGCACACCGGCGAGAGGCCCTATGCGTGCGACCAGTGCGACAGTTGCTTCACGGAGAAGCGGGCGCTGTTGAAGCATCAGGCGGCCGTGCATCAGAGTGAGACAGATATTGTTTTTGAGATGAAAGTTTTATAG
- Protein Sequence
- MDRCCVAYGCRNVPQGDCGSANVITFHQFPSNAELKEKWIEAVKSWQPTKECRLCSDHFSADSFEGKAGKVLLKKGAVPSKFKHSVTLDKNKVAIEALQKENSGLKMVTARLQKELKESARSIVEAEMKLAEYKNAIEKLMNKLRKVRDRKKIDETKNADGVPSKENRKTPNVAANVNREAALHESRTISNNDRLNFEEDSLTYDCPKKTDEISEKVITEKLISSAITNMNEVGPDSLELHNVLIVVDENDSSEDETVPDLDMDVEDDDDDDDDIEMYQSGESLLETDDEDYDDNGDDDDDDDDDDDDDDDDDLEKITENLGKKRRRGKGRKPKVVYSCKYCDKVFPRRRALERHLRTHDEEKEFECDVCGKRFAFEKMLTRHMNVHDTNPIHCDICEKTFTTKSLLTLHLRMIHTGERPYQCELCDEKFFMSSHLNEHAVKVHHAEKMFNCGECNKCFFKVKQLTQHMRLHTGERVYMCEVCGKSYITRSQLATHTRACHGEKPFVCQQCGKAFTTNYNLNMHLRTHSDHAPFACDFCDAKFKTQFNCAAHMKLHAGDKPFLCDYCDSRFALKEELTEHRVTHNAERPHECDTCHKRFTKATLLRTHRKTHTEERRYKCDLCDKQFKVRKSLVLHRRFHTGEMPFECSICQARFNTKTVMIRHIKTVHVGDIQFQCGICEDTFAQEILLTEHIKQEHPGNEPFKCVKCDKRFKMAYALATHNCQKEPEVCTVCGKTFPYKSALEQHMITHSTERPHRCEHCGKCFKYRQFMVNHVKSLHTGENVFACQTCNMVFSAKHNMVRHVRDVHQGEKRFSCDFCGRLFAQKSVMLTHRRTHTGERPYACDQCDSCFTEKRALLKHQAAVHQSETDIVFEMKVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01353791;
- 90% Identity
- iTF_01353791;
- 80% Identity
- iTF_01353791;