Sfur002421.1
Basic Information
- Insect
- Sogatella furcifera
- Gene Symbol
- -
- Assembly
- GCA_014356515.1
- Location
- chr5:6687417-6706079[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 34 0.78 40 5.1 9.1 1 23 143 165 143 166 0.96 2 34 0.0019 0.097 13.4 1.6 1 23 201 223 201 223 0.98 3 34 0.002 0.1 13.3 0.5 1 23 229 251 229 251 0.98 4 34 0.00026 0.013 16.1 3.3 1 23 257 279 257 279 0.99 5 34 0.00026 0.013 16.1 1.8 1 23 285 307 285 307 0.99 6 34 0.0032 0.16 12.7 3.1 1 23 313 335 313 336 0.96 7 34 4.1e-05 0.0021 18.6 0.2 1 23 342 364 342 364 0.98 8 34 1.9 99 3.9 1.6 1 15 370 384 370 385 0.90 9 34 0.093 4.8 8.1 7.5 1 23 415 437 415 438 0.96 10 34 0.00041 0.021 15.5 0.5 1 23 470 492 470 492 0.98 11 34 0.0023 0.12 13.1 1.4 3 23 505 525 503 525 0.97 12 34 0.00015 0.0077 16.8 1.3 1 23 531 554 531 554 0.98 13 34 0.0023 0.12 13.1 1.7 1 23 560 582 560 582 0.91 14 34 0.021 1.1 10.1 5.3 1 23 588 611 588 611 0.98 15 34 0.0084 0.44 11.3 7.3 1 23 661 683 661 684 0.96 16 34 8.2e-05 0.0042 17.7 0.4 2 23 717 738 716 738 0.96 17 34 0.00073 0.038 14.7 2.0 1 23 744 766 744 766 0.98 18 34 0.0007 0.036 14.7 4.6 1 23 847 869 847 870 0.96 19 34 0.0027 0.14 12.9 2.6 2 23 903 924 902 924 0.97 20 34 0.033 1.7 9.5 1.4 1 23 930 952 930 952 0.97 21 34 0.0087 0.45 11.3 2.2 1 23 958 980 958 980 0.98 22 34 0.0038 0.2 12.4 2.0 1 23 986 1008 986 1008 0.98 23 34 0.00048 0.025 15.2 2.7 1 23 1014 1037 1014 1037 0.98 24 34 0.0017 0.088 13.5 5.9 1 23 1109 1132 1109 1132 0.97 25 34 0.0042 0.22 12.3 1.6 2 23 1164 1185 1163 1185 0.96 26 34 0.021 1.1 10.1 0.8 1 23 1191 1213 1191 1213 0.97 27 34 0.00051 0.026 15.2 1.9 1 23 1219 1241 1219 1241 0.98 28 34 0.0085 0.44 11.3 2.7 1 23 1247 1269 1247 1269 0.98 29 34 0.0021 0.11 13.2 1.4 1 23 1275 1298 1275 1298 0.97 30 34 0.0004 0.02 15.5 2.7 2 23 1387 1408 1386 1408 0.97 31 34 0.012 0.63 10.8 0.8 1 23 1414 1436 1414 1436 0.98 32 34 0.0013 0.07 13.8 0.8 1 23 1442 1464 1442 1464 0.98 33 34 0.013 0.68 10.7 0.5 1 23 1470 1493 1470 1493 0.97 34 34 0.0007 0.036 14.7 2.2 1 23 1499 1522 1499 1522 0.97
Sequence Information
- Coding Sequence
- ATGGATCACGATCAGTTGGACACTGACAGCTGCTTGCAGGGGAGTAATAATGAGTTTGAATTCGTTGAAGTCAAGGTGGAGGCCCCTGAAGAATTGGATGTGGACCAGGATCAGTTGAACTCTGGCTGCTCCTTGCCGGAGAGTAATAATGAAGTTGAATTCTTTGAAATGAAAATGGAGACCCCTGAAGAATTGGATGTTGAACAGATTGAACCCTTTGCTGTCAGCGAAGTGTGCAATGAGGGTGAGCCCTTCATCAGAGATCCACTATCCGCCACGGAAGAAACAGAAGAACATCTACAAGATAACCGAGACCCGTTGTCGAGTGATTTACACATTCTTGGGCATTCTTCAGCTGAGAAAAGTTGGAATCCAGTTTCAGCAGAAATTGACGAAGTTGATGAAGTGAAGCAAGAGAAGCCAGTCTACAACTGCCCAAAGTGTGAGTACAAGTGTACAAAACTCAGTGTTCTGCACAAACACTTCAAAACACATCACGTGGTTGCAGCTGAAACTAGTGAAAGTGGTGTTGATCAAAATAGGGGGACAGAACAGTCTTCACCAAAATCACATTCCACATCGAACATTGAAGGAAAACTGTTTAGTTGTGAACTTTGTGATTTCAAGACAAGATATGCGCGTGATTTGAAAAGACATCTATTAAGGCATACTGGAGTAAAACCTTTTATTTGTGAGTTTTGTGGGTATAGAGCATCTCTAGCACGGACTTTAAAAGTACATATGAGAAAGCATACAGGAGAAAGGCCATATAGCTGTAAGTTATGTGAATACAAATCAACCCAATTAAGTTATTTAAAAACACATATGAGAAAGCATACAGGAGAAAAGCCTTTTAAATGTGAGCTATGTGATTTCAAATCAATTACATCAAGTTATTTAAAAGTGCATTTGAGAAAGCATACAGGGGAGAAACCTTTTAGCTGTAAGTTATGTGAATATAAAACAACTGAATCAAGTAGTTTGAAAATACATACAAGAATTCATCATATGGGTGAGAAACCTTTTAGCTGTGAGTTATGTGGAGTTAGAGCAGCTACATCAACTAATTTAAAAGTACATATGAGAACGCATACAGGAGAAAAACCATATAGCTGTGAGTACTGTGATTATAAGTCAACTCAATCAGATGATTTTCCACCTCTCAAACACATAGCTGACAATGATGATGACCAAAGTGGAGATACAGTTGTTGGTGGTTCCTCTCCAGCTTCCTCCCCATTCTTCAGGTGCACTCGATGCTATTACAGATGTACAAGACTCACCGTTCTCAACCAACACATCAGAACACATCATGTGGCAGCTGAATTGAGTGAAAACGGTGTTAATAAGACAACAAAACAATCAACACCAAAACATCTTCCGATATCAAGCGAAGAAATAAAGCTTTTCATTTGTGAAGTTTGTGGTTATAAAGGGAAAAAGTCTACTGATTTGAGAGTGCATTTGAGAAAGCATAAAAGCATAAAGTGCAAAGAAAAAAAACCTTCTAACTGTGGACTATGTGATTATAAAACAAATAAATCAAGTTATTTAAAAGTGCATTTAAGAAAGCATACAGGGGAGAAACCTTTCAGATGTGAGTTGTGTGAATATAAAACAAATTATTCAAGTAATTTAAAAGTACATATAAGAATCAAGCATATGCATGAGAAACCATTTAGCTGTGACTTTTGTGAAGTCAAAGCATTCACAAGGTATAATTTAAAAGTACATATGAGAAAGCATACAGGAGAAAGACCATATAGCTGTGAATTATGTGAATTTAAATCAACTCAATCATGTTATTTGAAACAACACATGAGGAAGAGGCATACAGGAGAAGAAACCCCTTCAAGAAAAACCTGCAAAGCAAAGCCATTGTCAGATGATTTGCCACCTCTCAAACACATGGCTGACAATGATGATGACCAAAGTGGAGATACAGTTGTTGGTGGTTCCTCTCCAGCTTCCTCTCCATTCTTCAGCTGCACTCAATGTGATTACAAGTGTACAAGATTCACTGTTCTCAACAAACACATCAGAACACATCATGTGGCAGCTGAATCAAGTAAAAACGGTGTTGATAGGACAACAAAACAATCAACACCAAAACATCTTCCCAGATCAAGAAAAGAAATAAAGCTTTTAATTTGTGAAATTTGTGATTATAAGACGAAAAGGCCTAATGATTTGAGAGTGCATTTGAGAAAGCATACAGGAGAAAAGCCTTTTAGCTGTGAGCTTTGTGATTTCAAAGCAATTACATCAAGTCATTTAAAAGTGCATTTAAGAAAGCATACAGGAGAGAAACCTTTTAGCTGTGAACTATGTGATTTCAAAGCAATTTCCATAAGAGAAGAAAGCATACATCAAAGGGTCCTCTCAACCAGGGGCAGCTACAGCAGGGAGGCGCTCAGACACTGTCCTCCCACTCAATTCAAGGCACAACCATTTTCGGATGATTCGCCCCCTCCCAAACCTATAGTTGACAATGATGATGAGAAAATTCAGGATAGAAGAAAGGCTTCCTCTCTAGACTTCAGGTGCACTCAATGCGATTACAAGTGTGCATCACCCACTGTTCTCAACAAACACATCAGAACACATCATGTGGCAACTGAATCAAGTGAAATTTGTGCTAATAGGACGACAAAACAATCAACATCACAACATCTTCCTACATCAAACATACAAATAAATCTTCTTAGTTGTGAACTTTGTGATTATAAGACAAAATATAAAAATAAACTGAGAAATCATTTAAGAAGGCATGCTGGAGGAAAACCTTTTATTTGTGAGTTTTGTGCATATAGATCATCTAGATTAACAACTTTAAAAGTGCATTTGAAAAAGCATACAGGAGAAAAGCCATTCAGCTGTGAGCTATGTGATTTCAAAGCAATTACATTAAGTCATTTAAAATTGCATTTAAAAAAGCATACAGGGGAGAAACCTTTTAGCTGTGATCTATGTGATTTCAGAGGAACTGTATCAACTCATTTAAAAATACATATGAGACAGCATACAGGTGAGAAACCTTATAGCTGTGATTTATGTGAATACAAAACAAATAGATCAGGTCATTTGAAAGTCCATATTAGAAGAAAGCATACATCAAAGAATTCTCTCAACCATGGGCAGCTACAGCAAGGAGGCGCTCGGACACTGCCTTCCCAGTCAATTCAAGATGAGGCACAACCAATGTCAGATAATTCACCCCCTCTCAAACACTTCGTTGACAATGATGATGGGCAAAGTGGAGATGCAGTTCTTGGTACTCAGTCACTGAACAAATTTGAGGTTGAGCAGCCTGCTTCCTCTCCATTCAACTGCACTCAATGCGATTACAAGTGTACAACCCACACTGCTCTCAACAATCACATCAGAACAAATCATGTGGCAGATGAATCAAGTGGGGAAGGTGCTTATAGGACGACAAAACAATCATCACAACATCTTCCTACATCAAACATAGAAATAAATCTTCTCAGTTGTGAACTTTGTGATTATAAGACAAAATATCAAATTAATCTGAGAAATCATTCAAGAAGGCATGTTGGAGGAAAACCTTTTATTTGTGAGTTTTGTGCATATAGATCATCTAGATTAGCGACTTTAAAAGTGCATTTGAAAAAGCATACAGGAGAAAAGCCTTACAGCTGTGAGCTATGTGATTTCAAAGCAATTACATCAAGTCATTTAAAAGTTCATTTAAGAAAGCATACAGGGGAGAAACCTTTTAGCTGTGATCTATGTGATTTCAAATCAACTGTATCAACCCATTTAAAATTACATATAAGACAGCATACTGGTGAGAAACCTTATAACTGTGATTTATGTGACTACAAAACAATAGGGTTAGGTCATTTGAAAGTCCATATGAGAAGAAAGCATACTTTATTAAAGAATCCTCTCAACCAAGGGCAGCTACAACAAAGAGGCGCTCAGACACTGCCTTCTCAGTCAATTCAAGATGAGGCACAACCATTGTCAGATGATTCGCCCCCTCTCAAACACATTGCTGACAATGATGATGAGCAAAATCACATCAGAACACATCATGTGGCAGCTAAATCAAGTGAAGAAGGTGCTAATAGGACGACAAAACAATCAACATCACAACATCCCCCTACATCAAACATAGAAATAAATCTTCTCAGTTGTAAACTTTGTGATTATAAGACAAAATATCAAAATAATCTGAGAAATCATTTAAGAAGGCATGCTGGAGAAAAACCTTTTGTTTGTGAGTTTTGTGCATATAGATCATCTAGATTAGCGACTTTAAAAGTGCATTTGAAAAAGCATACAGGAGAAAAGCCTTACAGTTGTGAGCTATGTGATTTCAAAGCAATTACAGCAGGCCATTTAAAAGTTCATTTAAGAAAGCATACAGGGGAGAAACCTTTTAGCTGTGAACTATGTGATTTCAAAGCAACTGTATCAGCCCATTTAAAAGAACATATTATGGTGCAGCATACAGGTGAGAAACCTTTTAGCTGTGAGTTATGTGAATACAAAACAATTAGATCAGGTCATTTGAAAGTTCATATTAGAAGAAAGCATACATTGAAGAATCCTCTCAACATTGAGGTC
- Protein Sequence
- MDHDQLDTDSCLQGSNNEFEFVEVKVEAPEELDVDQDQLNSGCSLPESNNEVEFFEMKMETPEELDVEQIEPFAVSEVCNEGEPFIRDPLSATEETEEHLQDNRDPLSSDLHILGHSSAEKSWNPVSAEIDEVDEVKQEKPVYNCPKCEYKCTKLSVLHKHFKTHHVVAAETSESGVDQNRGTEQSSPKSHSTSNIEGKLFSCELCDFKTRYARDLKRHLLRHTGVKPFICEFCGYRASLARTLKVHMRKHTGERPYSCKLCEYKSTQLSYLKTHMRKHTGEKPFKCELCDFKSITSSYLKVHLRKHTGEKPFSCKLCEYKTTESSSLKIHTRIHHMGEKPFSCELCGVRAATSTNLKVHMRTHTGEKPYSCEYCDYKSTQSDDFPPLKHIADNDDDQSGDTVVGGSSPASSPFFRCTRCYYRCTRLTVLNQHIRTHHVAAELSENGVNKTTKQSTPKHLPISSEEIKLFICEVCGYKGKKSTDLRVHLRKHKSIKCKEKKPSNCGLCDYKTNKSSYLKVHLRKHTGEKPFRCELCEYKTNYSSNLKVHIRIKHMHEKPFSCDFCEVKAFTRYNLKVHMRKHTGERPYSCELCEFKSTQSCYLKQHMRKRHTGEETPSRKTCKAKPLSDDLPPLKHMADNDDDQSGDTVVGGSSPASSPFFSCTQCDYKCTRFTVLNKHIRTHHVAAESSKNGVDRTTKQSTPKHLPRSRKEIKLLICEICDYKTKRPNDLRVHLRKHTGEKPFSCELCDFKAITSSHLKVHLRKHTGEKPFSCELCDFKAISIREESIHQRVLSTRGSYSREALRHCPPTQFKAQPFSDDSPPPKPIVDNDDEKIQDRRKASSLDFRCTQCDYKCASPTVLNKHIRTHHVATESSEICANRTTKQSTSQHLPTSNIQINLLSCELCDYKTKYKNKLRNHLRRHAGGKPFICEFCAYRSSRLTTLKVHLKKHTGEKPFSCELCDFKAITLSHLKLHLKKHTGEKPFSCDLCDFRGTVSTHLKIHMRQHTGEKPYSCDLCEYKTNRSGHLKVHIRRKHTSKNSLNHGQLQQGGARTLPSQSIQDEAQPMSDNSPPLKHFVDNDDGQSGDAVLGTQSLNKFEVEQPASSPFNCTQCDYKCTTHTALNNHIRTNHVADESSGEGAYRTTKQSSQHLPTSNIEINLLSCELCDYKTKYQINLRNHSRRHVGGKPFICEFCAYRSSRLATLKVHLKKHTGEKPYSCELCDFKAITSSHLKVHLRKHTGEKPFSCDLCDFKSTVSTHLKLHIRQHTGEKPYNCDLCDYKTIGLGHLKVHMRRKHTLLKNPLNQGQLQQRGAQTLPSQSIQDEAQPLSDDSPPLKHIADNDDEQNHIRTHHVAAKSSEEGANRTTKQSTSQHPPTSNIEINLLSCKLCDYKTKYQNNLRNHLRRHAGEKPFVCEFCAYRSSRLATLKVHLKKHTGEKPYSCELCDFKAITAGHLKVHLRKHTGEKPFSCELCDFKATVSAHLKEHIMVQHTGEKPFSCELCEYKTIRSGHLKVHIRRKHTLKNPLNIEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -