Sfur002058.1
Basic Information
- Insect
- Sogatella furcifera
- Gene Symbol
- -
- Assembly
- GCA_014356515.1
- Location
- chr5:6661903-6677743[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 42 0.037 1.9 9.3 5.4 1 23 96 118 96 119 0.95 2 42 0.61 32 5.5 2.9 2 23 151 172 150 172 0.95 3 42 2.2e-05 0.0011 19.5 2.0 1 23 178 200 178 200 0.98 4 42 0.001 0.052 14.2 1.1 3 23 208 228 206 228 0.98 5 42 0.0054 0.28 11.9 5.0 1 23 234 256 234 256 0.98 6 42 0.0039 0.2 12.4 1.4 3 23 264 284 262 284 0.98 7 42 0.015 0.75 10.6 0.7 1 23 290 312 290 312 0.97 8 42 0.0021 0.11 13.2 1.9 1 23 318 340 318 340 0.97 9 42 0.013 0.67 10.7 3.1 1 23 346 369 346 369 0.97 10 42 0.00092 0.047 14.4 1.9 3 23 377 397 375 397 0.98 11 42 0.019 1 10.2 0.9 3 23 405 426 403 426 0.96 12 42 0.0021 0.11 13.2 6.3 1 23 607 629 607 630 0.96 13 42 0.1 5.4 7.9 6.1 1 23 665 687 665 687 0.98 14 42 0.00046 0.024 15.3 1.2 1 23 693 715 693 715 0.98 15 42 0.00087 0.045 14.4 0.4 1 23 721 743 721 743 0.97 16 42 0.14 7 7.5 6.5 1 23 749 771 749 771 0.98 17 42 0.00075 0.039 14.6 0.6 1 23 777 799 777 799 0.97 18 42 0.011 0.56 11.0 0.2 1 23 805 827 805 827 0.98 19 42 0.037 1.9 9.3 1.6 1 23 833 855 833 855 0.97 20 42 0.0072 0.37 11.6 5.8 1 23 988 1010 988 1011 0.95 21 42 0.61 32 5.5 2.9 2 23 1044 1065 1043 1065 0.95 22 42 2.2e-05 0.0011 19.5 2.0 1 23 1071 1093 1071 1093 0.98 23 42 0.001 0.052 14.2 1.1 3 23 1101 1121 1099 1121 0.98 24 42 0.0077 0.4 11.5 6.1 1 23 1127 1149 1127 1149 0.98 25 42 0.0039 0.2 12.4 1.4 3 23 1157 1177 1155 1177 0.98 26 42 0.0045 0.23 12.2 5.7 1 23 1310 1332 1310 1333 0.96 27 42 0.055 2.8 8.8 4.5 1 23 1368 1390 1368 1390 0.97 28 42 0.00046 0.024 15.3 1.2 1 23 1396 1418 1396 1418 0.98 29 42 0.00083 0.043 14.5 1.5 1 23 1424 1446 1424 1446 0.98 30 42 0.0016 0.084 13.6 2.9 1 23 1452 1474 1452 1474 0.98 31 42 0.23 12 6.8 0.7 3 23 1482 1503 1480 1503 0.96 32 42 0.035 1.8 9.4 2.6 1 23 1509 1531 1509 1531 0.98 33 42 0.0042 0.22 12.3 2.1 1 23 1537 1559 1537 1559 0.97 34 42 2e-05 0.001 19.6 0.7 1 23 1565 1587 1565 1587 0.98 35 42 0.029 1.5 9.6 2.6 1 23 1593 1615 1593 1615 0.98 36 42 0.0021 0.11 13.2 6.3 1 23 1681 1703 1681 1704 0.96 37 42 0.14 7.5 7.5 5.9 1 23 1739 1761 1739 1761 0.98 38 42 0.00028 0.015 16.0 0.8 1 23 1767 1789 1767 1789 0.98 39 42 0.00098 0.05 14.3 0.4 1 23 1795 1817 1795 1817 0.97 40 42 0.14 7 7.5 6.5 1 23 1823 1845 1823 1845 0.98 41 42 0.00075 0.039 14.6 0.6 1 23 1851 1873 1851 1873 0.97 42 42 0.011 0.56 11.0 0.2 1 23 1879 1901 1879 1901 0.98
Sequence Information
- Coding Sequence
- ATGAAACGACTCAATCAAGTGAAAGATTATCTTGGAATTCATACAGGAGAAGAACCTTTCAGCTTAAAGCTATGTGAATTGAAAGCAACTACATTGATATTGATCAACTATGCTTTCACCACAACTGGAGTTGGATTAATCTCATGTTTTCCTTCTGTTTCTTCTCCAGATGAAGCAAAGCCATTGTCAGATGATTCGCACCCTCTTGAACATATTGCTGACAATGATGATGATCAAAGAGGAGATATAGTTGTTGGAGGTTCCTCTACAGCTTCCTCTCCATTCTTCAACTGCACTCAATGCGATCTCAAGTGTACAAGACTCACTGTTCTCAACAAACACATCAGTACACATCATGTGGCAGCTGATTCAAATCGAAGTAGTATTGATCAAAATAGTAAGATGGAACAGTCTTCAATGGAATCTGATACCATTGGAGAGAAACTATTAATTTGTGAACTTTGTAATTTTAAGACAAAGTATGGCCATGATTTGAAAAGACATCTATTTAGGCATAGAGGAGTAGAACCATTTAGCTGTGAGATATGTGAATTAAAAGTAACTACATCAAGTCATTTAAAAGTACATATGAGAAAGCATACAGGGGAAAAGCCTTTTGGCTGTGAGCTATGTGAATTCAAATCAAATAGTTCAAGTAATTTGAAAGTACATATGAGAAAGCATACCGGAGAAAAACCTTATAACTGTGAGTTATGTGAATTTAAATCAACTCGATCAAATCATTTGAAAACACATATGAAAAAGCATACAGGAGATAAACCCTTTGGCTGTGAGTTATGTAAATTTAAAGCAACTACATCCAGTTATTTAAAAGAACATATGAGAAAGCATACAGGAGAAAAACCATTTGCCTGTGAGTTCTGTGAATATAAATCAACACAATCAGGTCGTTTGAAAGAACATCTCAGAATTCATACAGGAGCCAATCCTTTTGCCTGTGAGCTATGTGAATTCAAAACAAATAGATCCCGTTATTTAAAAATACATATGAGAAAGCATACAGGAGAAAAACCTTATAACTGTGAGTTATGTGAATTTAAAACGACTCAATCAAATCATTTGAAAGAACATATTATGAGAAAGCATACAAGAGATAAACCCTTTGGCTGTGAGTTATGTGAATACAAAGCAACCACATCCAGTCATTTAAAAATACATATGAGAAAGCATACAGGAAATAAACCCTTTGGCTGTGAGTTCTGTGAATTTAAAGCAACCACATCCAGTTATTTAAATGTGCATATGAGAAATAAGCATACAGGAGAAAAACTCATAGTTGTTAGTTCTGTGAATATAAATCAAATCAATCAGACTATCTCAGAATTCATACAGGAGAAAAACCTTTTGCCTGTGAGCCATGAGAAAAACCTTTTGCCTGTGAGCCATGTGAATTTGAAAGACTATCTCAGAATTCATACAGGAGGAAAACCTTTTGCCTGTGAGCCATGTGAATTCAAAACAGCTAGTACAAGCATTTACATCAAGGCAATTAAAAGAACATCTGACAGCATACAGGAGAAAAACCTTTTGGTTGTGAGCTATGTGAATTCAAATCAACAAGTTCAACAACTCAATCAAGTGAAGGATTATCTTGGTATTCATGCAGGAGAAGAACCTTTCGGCTTTGAGCTATGTGAACTAAAAGAAACTACATTGAATGAAGCAAAGCCATTGTCAGATGATTCGCACCCTCTTGAACATATTGCTGACAATGAGGATGATCAAAGAGGAGATACAGTTGTTGGTGTTCAGACACTGAACCGATTTGAGGTTGGGAAGACGGCTTCCTCTCCACTCTACAGCTGCACTCAATGCGATTACAAGTGTACAAGACTCACTGTTCTCAACAAACACATCAGAACACATCATGTGGTGGCAGCTGAATCAAGTGGAAGTGGTGTTGATCAAAATAGGGGGACAGAGCAGTCATCACCAAAATCTCATTCCACATCAAACATTGAAGGAAAACTATTTACTTGTGAACTTTGTGATTTCAAGACAAGATATGGGCATCATTTGAAAAGACATCTACTCAGGCATACAGGAGAAAAACTGTATAGTTGTGAGTTCTGTGAATATAAATCAACTCAATCAGGTAATTTAAAAGTACATGTGAGAAAGCATACAGGAGAAAAACCTTATAACTGTGAGTCATGTGGATTCAAAACAGCTACTTCAAGTGATTTAAAAGTACATATGGGAAAGCATACAGGAGAAAAACGTTATAGTTGTGAGTTCTGTGAATATAAATCATCTCAATCATGTCATTTCAAAGAACATCTCAGAATTCATACAGGAGAGAAACCTTTTGCCTGTGTGCTATGTGAATTCAAAGCAACTAGTTCGAGTAATTTAAAAGTACATATGAGAAAGCATACAGGTGAAAAACCTTATAATTGTGAGTTATGTGAATACAAAGCAATTACATTAGGTAATTTAAAATTACATATGATCAAGCATACAGGAGAAAAACCCTTTGCCTGTGAGTTATGTGAATATAAAACAACTAGATCAAATATCTTGAAAAAACATTTAAGAAAGCATTCAGGTGAAAAACCTTTTGGTTGTGAGTTGTGTGAATTCAAAACAACTACATCAAGTCGTCTTGATGTCTACATCAAGAACATCTTGGAAAGCATACAGGAGAAAAACCTTTTGGCTGTGAACTATGTGAATACAAAACAAGTACATCCAGTGAAAACCCTTAGAGCTGTGAGCTTTGTGGATATGAAACGACTCAATCAAGTGAAAGATTATCTTGGAATTCATACAGGAGAAGAACCTTTCAGCTTTGAGCTATGTGAATTAAAAGCAACTACATCGAATGAAGCAAAGCCAATGTCAGATGATTCGCACCCTCTTGAACATATTGCTGACAATGATGATGATCAAAGAGGAGATATAGTTGTTGGAGGTTCCTCTACAGCTTCCTCTCCATTCTTCAACTGCACTCAATGCGATCTCAAGTGTACAAGACTCACTGTTCTCAACAAACACATCAGAACTCATCATGTGGTGGCAGCTGAATCAAGTGGAAGTGGTGTTGATCAAAATAGTAAGATGGAACACTCTTCAATGGAATCTGATACCATTGGAGAGGAACTATTAATTTGTGAACTTTGTAATTTTAAGACAAAGTATGGCCATGATTTGAAAAGACATCTATTTAGGCATAGAGGAGTAGAACCATTTAGCTGTGAGATATGTGAATTAAAAGTAACTACATCAAGTCATTTAAAAGTACATATGAGAAAGCATACAGGGGAAAAGCCTTTTGGCTGTGAGCTATGTGAATTCAAATCAAATAGTTCAAGTAATTTGAAAGTACATATGAGAAAGCATACCAGAGAAAAACCTTATAACTGTAAGTTATGTGAATTTAAATCAACTCGATCAAATCATTTGAAAACACATATGAAAAAGCATACAGGAGATAAACCCTTTGGCTGTGAGTTATGTAAATTTAAAGCAACTACATCCAGTTATTTAAAAGAACATATGAGAAAGCATACAGGAGAAAAACCATTTGCCTGTCGTTTGAAAGACTATCTCAGAATTCATACAGGAGGAAAACCTTTTGCCTGTGAGCCATGTGAATTCAAAACAGCTAGTTCAAGCATTTACATCAAGGCAATTAAAAGAACATCTGACAGCATTCAGGTGAAAACCCATAGAGCTGTAAGCTTTGTGGATATGAAACAACTCAATCAAGTGAAGGATTATCTTGGTATTCATGCAGGAGAAGAACCTTTCGGCTTTGAGCTATGTGAATTAAAAGCAACTACATTGAATGAAGCAAAGCCAATGTCAGATGATTTGCACCCTCTTGAACATATTGCTGACAGTGATGATGATCAAAGAGGAGATACTGTTGGTGGAGGTTCCTCTACAGCTTCCTCTCCATTCTTCAGCTGCACTCAATGCGATCTCAAGTGTACAAGACTCACTGTTCTCAACAAACACATCAGAACTCATCATGTGGTGGCAGCTGAATCAAGTGGAAGTGGTGTTGATCAAAATAGGAGGACAGAGCAGTCTTCATCAAAATCTCATTCCACATCAAACATTGAAGTAAAACTATTTAGTTGTGAACTTTGTGATTTCAAGACAAGATATGGGTCTCATTTGAAAAGACATCTATTTAGGCATACAGGAGGAAAACTGTATAGTTGTGAGTTCTGTGAATATAAATCAACTCAATCAGGTAATTTAAAAGTACATGTGAGAAAGCATACAGGTGAAAAACCTTATAACTGTGAGTTATGTGAATTTAAAGCAACTACATCAAGTTATTTAAAAGAACATATGAGAAAGCATACCGGAGAAAAACCTTATAACTGTGAGTTCTGTGAATTTAAATCAACTCGATCAAATAATTTGAAAATACATATGAAAAAGCATACAGGAGATAAACCCTTTGGCTGTGAGTTATGTGAATTTAAAGCAACTACATCCAGGTATTTAAAAGATCATATTATGAGAAAGCATGCAGGAGAGAAACCTTATAACTGTGAGTTCTGTGAATATAAATCAACTCATTCAGGTCGTTTGAAAGAACATCTCAGAATTCATACAGGAGCCAAACCTTTTGCCTGTGAGCTATGTGAATTCAAAACATATAGATCTCGTTATTTAAAAATACATATGAGAAAGCATACAGGAGAAAAACCTTATAACTGTGAGTTATGTGGATTCAAAACAGCTACATCAAGTGATTTAAAAGTACATATGAGAAAGCATACAGGAGAAAAACCTTATAACTGTGAGTTCTGTGAATATAAATCAAATCAATCAGGTTGTTTGAAAGACCATCTCAGAATTCATACAGGAGAAAAACCTCTTGCCTGTGAGCCATGTGAATTCAAAACAGCTAGTTCAAATGAAGCAAAGCCATTGTCAGATGATTTGCACCCTCTTAAACATATTGCTGACAATGAGGATGATCAAAGAGGAGATACAGTTGTTGGTGTTCAGACACTGAACCAATTTGAGGTTGGGAAGACGGCTTCCTCTCCATTCTACAGCTGCACTCAATGCGATTACAAGTGTACAAGACTCACTGTTCTCAACAAACACATCAGAACACATCATGTGGTGGCAGCTGAATCAAGTGGAAGTGGCGTTGATCAAAATAGGGGGACAGAGCAGTCTTCACCAAAATCTCATTCCACATCGAACATTGGAGTAAAACTATTTAGTTGTGAACTTTGTGATTTCAAGACAAGATATGGGCATCATTTGAAAAGACATCTACTCAGGCATACAGGAGAAAAACTGTATAGTTGTGAGCTCTGTGAATATAAATCAACTCAATCAGGTAATTTAAAAGTACATGTGAGAAAGCATACAGGAGAAAAACCTTATAACTGTGAGTCATGTGGATTCAAAACAGCTACATCAAGTGAGTTAAAAGTACATATGGGAAAGCATACAGGAGAAAAACGTTATAGTTGTGAGTTCTGTGAATATAAATCATCTCAATCATGTCATTTCAAAGAACATCTCAGAATTCATACAGGAGAGAAACCTTTTGCCTGTGTGCTATGTGAATTCAAAGCAACTAGTTCGAGTAATTTAAAAGTACATATGAGAAAGCATACAGGAGAAAAACCTTATAACTGTGAGTTATGTGAATACAAAGCAATTACATTAGGTAATTTAAAATTACATATGATCAAGCATACAGGAGAAAAACCCTTTGCC
- Protein Sequence
- MKRLNQVKDYLGIHTGEEPFSLKLCELKATTLILINYAFTTTGVGLISCFPSVSSPDEAKPLSDDSHPLEHIADNDDDQRGDIVVGGSSTASSPFFNCTQCDLKCTRLTVLNKHISTHHVAADSNRSSIDQNSKMEQSSMESDTIGEKLLICELCNFKTKYGHDLKRHLFRHRGVEPFSCEICELKVTTSSHLKVHMRKHTGEKPFGCELCEFKSNSSSNLKVHMRKHTGEKPYNCELCEFKSTRSNHLKTHMKKHTGDKPFGCELCKFKATTSSYLKEHMRKHTGEKPFACEFCEYKSTQSGRLKEHLRIHTGANPFACELCEFKTNRSRYLKIHMRKHTGEKPYNCELCEFKTTQSNHLKEHIMRKHTRDKPFGCELCEYKATTSSHLKIHMRKHTGNKPFGCEFCEFKATTSSYLNVHMRNKHTGEKLIVVSSVNINQINQTISEFIQEKNLLPVSHEKNLLPVSHVNLKDYLRIHTGGKPFACEPCEFKTASTSIYIKAIKRTSDSIQEKNLLVVSYVNSNQQVQQLNQVKDYLGIHAGEEPFGFELCELKETTLNEAKPLSDDSHPLEHIADNEDDQRGDTVVGVQTLNRFEVGKTASSPLYSCTQCDYKCTRLTVLNKHIRTHHVVAAESSGSGVDQNRGTEQSSPKSHSTSNIEGKLFTCELCDFKTRYGHHLKRHLLRHTGEKLYSCEFCEYKSTQSGNLKVHVRKHTGEKPYNCESCGFKTATSSDLKVHMGKHTGEKRYSCEFCEYKSSQSCHFKEHLRIHTGEKPFACVLCEFKATSSSNLKVHMRKHTGEKPYNCELCEYKAITLGNLKLHMIKHTGEKPFACELCEYKTTRSNILKKHLRKHSGEKPFGCELCEFKTTTSSRLDVYIKNILESIQEKNLLAVNYVNTKQVHPVKTLRAVSFVDMKRLNQVKDYLGIHTGEEPFSFELCELKATTSNEAKPMSDDSHPLEHIADNDDDQRGDIVVGGSSTASSPFFNCTQCDLKCTRLTVLNKHIRTHHVVAAESSGSGVDQNSKMEHSSMESDTIGEELLICELCNFKTKYGHDLKRHLFRHRGVEPFSCEICELKVTTSSHLKVHMRKHTGEKPFGCELCEFKSNSSSNLKVHMRKHTREKPYNCKLCEFKSTRSNHLKTHMKKHTGDKPFGCELCKFKATTSSYLKEHMRKHTGEKPFACRLKDYLRIHTGGKPFACEPCEFKTASSSIYIKAIKRTSDSIQVKTHRAVSFVDMKQLNQVKDYLGIHAGEEPFGFELCELKATTLNEAKPMSDDLHPLEHIADSDDDQRGDTVGGGSSTASSPFFSCTQCDLKCTRLTVLNKHIRTHHVVAAESSGSGVDQNRRTEQSSSKSHSTSNIEVKLFSCELCDFKTRYGSHLKRHLFRHTGGKLYSCEFCEYKSTQSGNLKVHVRKHTGEKPYNCELCEFKATTSSYLKEHMRKHTGEKPYNCEFCEFKSTRSNNLKIHMKKHTGDKPFGCELCEFKATTSRYLKDHIMRKHAGEKPYNCEFCEYKSTHSGRLKEHLRIHTGAKPFACELCEFKTYRSRYLKIHMRKHTGEKPYNCELCGFKTATSSDLKVHMRKHTGEKPYNCEFCEYKSNQSGCLKDHLRIHTGEKPLACEPCEFKTASSNEAKPLSDDLHPLKHIADNEDDQRGDTVVGVQTLNQFEVGKTASSPFYSCTQCDYKCTRLTVLNKHIRTHHVVAAESSGSGVDQNRGTEQSSPKSHSTSNIGVKLFSCELCDFKTRYGHHLKRHLLRHTGEKLYSCELCEYKSTQSGNLKVHVRKHTGEKPYNCESCGFKTATSSELKVHMGKHTGEKRYSCEFCEYKSSQSCHFKEHLRIHTGEKPFACVLCEFKATSSSNLKVHMRKHTGEKPYNCELCEYKAITLGNLKLHMIKHTGEKPFA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -