Sfur005118.1
Basic Information
- Insect
- Sogatella furcifera
- Gene Symbol
- -
- Assembly
- GCA_014356515.1
- Location
- chr2:36804077-36814431[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.008 4.4 7.6 0.4 18 39 89 107 82 113 0.84 2 9 0.0043 2.4 8.5 0.3 17 36 116 132 109 138 0.74 3 9 0.38 2.1e+02 2.2 0.4 15 38 142 166 136 170 0.81 4 9 0.015 8.4 6.7 1.0 18 38 173 190 168 191 0.91 5 9 0.0025 1.4 9.2 1.1 16 38 199 222 191 222 0.89 6 9 0.0057 3.1 8.1 1.1 18 40 229 248 224 251 0.88 7 9 0.018 9.9 6.5 2.4 17 40 256 276 248 285 0.83 8 9 0.0095 5.2 7.4 0.6 19 41 286 305 281 306 0.90 9 9 0.00014 0.078 13.2 0.7 19 43 314 335 310 336 0.94
Sequence Information
- Coding Sequence
- ATGGATGACTCTAATGTGCCAACGCATGAACTGAATTCAGATCAAGATTGCTTTGAAGACAGGTACAAAAGCCAAGACAACTTGGGGGATCACAACCAATGTACAAATCTCAATTACAAATATCCATTTGAAATTATAATTCCTGATACAAACAAAGTAATTGAAGAAGATCAATGCATTTCTGCTGACAATACCAATGCAATTGGTAATCTTGAAAATGGTAACATATTATCTACTCTCTCAAATACTGGAGACAGAACTTACAAATGTGAAGTGTGCAATAAATCATTCAATGATGAGTCCAATCTCACAAAACACTTGAGTGTACACACTAGGGAAGGACCCTATAGCTGTGATTTTTGTGGTAAAACATTCACTTATAAATCATCTTTAACCTTACATTTGAATTTACATACTGGTGAAAACCTTCACACCTGTGAATTTTGTTATAGACCATTCACAGGAAAAGCCAAACTTACTGGACACTTACGTACACATACTGGTGAGAGACCTTACAACTGTAAACTGTGTAATAAATCATTTAGTGATAAGTCCAACCTTAATAGACACTCGATTTTACACTCTTGGGAAAAGCTTCATAGATGTGAGATTTGTGGTAAGGGATTCACTCAAAAACTAAGTCTCACCTCACATTTACTTTCACATAGTGGGGAAAAACCTTACACATGTCACTTTTGTGGTAAATCATTCAATCAGAATTCAAATCTCACCGTTCATTTACGAATACATACTGGAGACAAACCCTTTATCTGCGAACTGTGCAATAAATCATTCAATAAGAAATCCAATCTTACTCTTCACTTACAAGCACATTCTGGGCAACGACTTCATATGTGTGAATTTTGTGATAAATCATTCAATCGGAAGTCAACTCTTTCCTTACATCTACGTACACACACTGGAGAAAGACCTTACAGTTGTGATATCTGTAATAGAACATTCATTCAAAAATCAACTCTTACCCGACACTTACGTACCGCACACACACTGGAGAAAGCCAGTTGCAGAACTGACTTATTGCTTCACGATTCAAGCATTAACTCATTTTTGGAAAAAATGTCACTTACCTGGTTTTTGTTCTCAGCCCCTCAGTTGATCGTGCCACACTTGTAA
- Protein Sequence
- MDDSNVPTHELNSDQDCFEDRYKSQDNLGDHNQCTNLNYKYPFEIIIPDTNKVIEEDQCISADNTNAIGNLENGNILSTLSNTGDRTYKCEVCNKSFNDESNLTKHLSVHTREGPYSCDFCGKTFTYKSSLTLHLNLHTGENLHTCEFCYRPFTGKAKLTGHLRTHTGERPYNCKLCNKSFSDKSNLNRHSILHSWEKLHRCEICGKGFTQKLSLTSHLLSHSGEKPYTCHFCGKSFNQNSNLTVHLRIHTGDKPFICELCNKSFNKKSNLTLHLQAHSGQRLHMCEFCDKSFNRKSTLSLHLRTHTGERPYSCDICNRTFIQKSTLTRHLRTAHTLEKASCRTDLLLHDSSINSFLEKMSLTWFLFSAPQLIVPHL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01353990;
- 90% Identity
- iTF_01353990;
- 80% Identity
- iTF_01353990;