Sfur005816.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sogatella furcifera
Gene Symbol
-
Assembly
GCA_014356515.1
Location
chr2:4643096-4651684[+]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 5.7e-06 0.0031 17.7 2.5 11 41 128 155 125 157 0.90
2 16 0.0064 3.6 7.9 1.6 18 41 163 183 155 185 0.87
3 16 0.064 35 4.7 0.2 18 40 191 210 186 213 0.85
4 16 0.11 58 4.0 2.7 14 40 215 238 207 244 0.70
5 16 0.039 21 5.4 1.5 17 40 246 266 236 269 0.78
6 16 0.039 22 5.4 0.4 19 41 276 295 271 297 0.77
7 16 0.12 65 3.9 1.4 17 40 302 322 292 325 0.82
8 16 0.1 58 4.0 2.6 14 40 327 350 319 353 0.68
9 16 0.016 9 6.6 1.2 17 41 358 379 347 381 0.84
10 16 0.11 62 4.0 4.3 17 41 386 407 376 409 0.83
11 16 0.13 70 3.8 1.9 15 40 412 434 403 437 0.78
12 16 0.039 21 5.4 3.2 14 41 439 463 431 465 0.70
13 16 0.071 39 4.6 0.3 18 40 471 490 465 493 0.81
14 16 0.33 1.8e+02 2.5 0.3 19 41 500 519 495 520 0.89
15 16 0.0054 3 8.2 1.1 14 41 523 547 515 549 0.82
16 16 0.12 65 3.9 3.1 18 39 555 573 548 576 0.81

Sequence Information

Coding Sequence
ATGTTAACAGTAAAATACATGGAGCAGATGAGTGAAATGGAGAAAGTGAGAATTGAAGATGAATTCAAGTCAGCTCACATAAATGATGAGGCGGTGAATCATATGGAGGAAGAAAATATTGAAGCAAGGCCTAAACATAAACCAGAAGGACTCAACACGATTTTATTTAAAGAAGAGTTGATTTTGCCTGATGAACAAGTTGATGGAGATGCGAAGGTCGAGGCCACTGAGGATCCTTTACAGCTGGAAGGCTGTTCCAGTCCAAGCCGGAAGTCCAAAATTGAAATATCTGCACCAGCTGTTTGTGTGGATCAAGAAAGAAATTTAGAAACTTGTGAAGAACCCAATTCATCAAATCCATTATCCAGTAATATAGACTTGTCAAGTACTTCAAACAACATTAAGTGCGAATTTTGTGTCAAAAGCTTTTCATATAAGAGCTGTTTGAAAGCACATATTAGAACTCACACTGGAGAGAAGCCTTACAATTGTGAGATATGTGAAAAAAGCTTTTCAATTAAGAGCACTTTGAATAAGCATATGAGGACTCACACTGGAGGGAACACTTACAATTGTGAATTTTGTGACAAGAGCTTTTCAGATAAGAGCACTTTGAATAAACATATTAGAAATCACACTGGAGAGAAGCCTTACAGTTGTGAAATTTGTGAAAAAAGCTTTTCACAAAAGACATATTTGACGGTTCATATGAGGACTCACACTGGAGAGAAGCCTTACAATTGTGAATTTTGTGAGAAGAGCTTTTCAGATAAGAGCACTTTGAATACACATATTAGAAATCACACTGGAGAGAGGCCTTACAGTTGTGAAATTTGTGAAAAAAGCTTTTCACAAAAGACATATTTGACGGTTCATTTGAGGACTCACACTGGAGAGAAGCCTTACAATTGTGAATTTTGTGACAAGAGCTTTTCAGATAAGAGCACTTTGAATAAACATATTAGAAATCACACTGGAGAGAAGCCTTACAGTTGTGAAATTTGTGAAAAAAGCTTTTCACAAAAGACATATTTGACGGTTCATATGAGGACTCACACTGGAGAGAAGCCTTACAATTGTGAATTTTGTGAGAAGAGCTTTTCAGATAAGAGCACTTTGAATAAACATATCAGAACTCACACTGGAGAGAAGCCTTACAATTGTGAGATATGTAAAAAAAGCTTTTCAATTAACAGCACCTTGAATAAGCATATGAGGACTCACACTGGAGGGAACACTTACAATTGTGAATTTTGTGACAAGAGCTTTTCAGATAAGAGCACTTTGAATAAACATATTAGAAATCACACTGGAGAGAAGCCTTACAGTTGTAAAATTTGTGAAAAAAGCTTTTCACAAAAGACATATTTGACGGTTCATTTGAGGACTCACACTGGAGAGAAGCCTTACAATTGTGAATTTTGTGAGAATAGCTTTTCAGATAAGAGCACTTTGAATACACATATTAGAAATCACACTGGAGAGAGGCCTTACAGTTGTGAAATTTGTGACAGAAGCTTTTCAGTTAAGAGCACTTTGAATAAACATATCAGAACTCACACTGGAGAGAAGCCTTACAATTGTGAATTTTGTGACAAGAGCTTTTCACAAAATAGCAACTTAATTGTTCACATGAGGACTCACACTGGAGAGAAGCCTTACAATTGTGAACATTGTGACAAAAACTTTTCACATAAGGGAAATTTACTTAAACATATCTGTACCTCAGAAGCAGAAGGTAGAGAGCCAATCAAAGGTTATTGA
Protein Sequence
MLTVKYMEQMSEMEKVRIEDEFKSAHINDEAVNHMEEENIEARPKHKPEGLNTILFKEELILPDEQVDGDAKVEATEDPLQLEGCSSPSRKSKIEISAPAVCVDQERNLETCEEPNSSNPLSSNIDLSSTSNNIKCEFCVKSFSYKSCLKAHIRTHTGEKPYNCEICEKSFSIKSTLNKHMRTHTGGNTYNCEFCDKSFSDKSTLNKHIRNHTGEKPYSCEICEKSFSQKTYLTVHMRTHTGEKPYNCEFCEKSFSDKSTLNTHIRNHTGERPYSCEICEKSFSQKTYLTVHLRTHTGEKPYNCEFCDKSFSDKSTLNKHIRNHTGEKPYSCEICEKSFSQKTYLTVHMRTHTGEKPYNCEFCEKSFSDKSTLNKHIRTHTGEKPYNCEICKKSFSINSTLNKHMRTHTGGNTYNCEFCDKSFSDKSTLNKHIRNHTGEKPYSCKICEKSFSQKTYLTVHLRTHTGEKPYNCEFCENSFSDKSTLNTHIRNHTGERPYSCEICDRSFSVKSTLNKHIRTHTGEKPYNCEFCDKSFSQNSNLIVHMRTHTGEKPYNCEHCDKNFSHKGNLLKHICTSEAEGREPIKGY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01353950;
90% Identity
iTF_01353950;
80% Identity
iTF_01353950;