Basic Information

Gene Symbol
-
Assembly
GCA_014356515.1
Location
chr4:45587541-45616395[-]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 8e-09 4.4e-06 26.8 0.6 3 43 536 573 535 574 0.96
2 18 0.0081 4.5 7.6 0.1 5 29 616 638 615 655 0.72
3 18 3e-06 0.0017 18.6 1.0 3 44 703 743 701 743 0.93
4 18 0.04 22 5.4 1.6 3 38 796 830 794 835 0.84
5 18 0.0013 0.71 10.2 1.6 3 40 909 945 908 954 0.89
6 18 0.0067 3.7 7.9 1.3 6 43 1001 1037 998 1038 0.88
7 18 0.0068 3.7 7.9 0.3 16 43 1145 1174 1137 1175 0.85
8 18 0.021 11 6.3 0.2 15 43 1215 1241 1209 1242 0.84
9 18 0.0017 0.93 9.8 3.6 12 44 1275 1308 1265 1308 0.84
10 18 0.0024 1.4 9.3 5.6 2 29 1320 1345 1319 1364 0.83
11 18 0.0039 2.2 8.6 3.3 6 30 1396 1418 1392 1423 0.83
12 18 3.2 1.7e+03 -0.7 0.1 14 28 1486 1500 1477 1505 0.78
13 18 7.2e-07 0.0004 20.6 2.4 2 43 1563 1603 1562 1604 0.97
14 18 0.00021 0.11 12.7 0.1 3 43 1642 1681 1640 1682 0.89
15 18 0.0021 1.2 9.5 0.2 3 43 1707 1751 1706 1752 0.82
16 18 6.5e-10 3.6e-07 30.3 0.1 1 44 1844 1887 1844 1887 0.97
17 18 7.5e-05 0.041 14.1 2.3 2 44 1944 1986 1943 1986 0.96
18 18 5.3e-09 2.9e-06 27.4 0.1 1 44 2197 2239 2197 2239 0.97

Sequence Information

Coding Sequence
ATGGAGAAAGCTCGTTCAACGGAATCATTGGACCTAGCGCTGCCTAGCGATGATAACCCGATATCAAACGTCGAGAAAGATGACATCAGTGCATCCTCTCAACAAAAAGGTAACTCAAGCACTCCAGAAGATTGTCTGAATGAGGACAAGAATTCAAGTGATCGATCCCCTTCTAAAGTGACAGCTGACCTGGATAAGGAAACACTAGGAGATGATGATCAACAACAGAAAATTGGAAATTCGCCAGACAAGTCAACAATTAGTCCAAGTAGAAGCTTGGGCACTCGACAAGATAAAAATACAAGACAGAAAATTGAAAGTTCGCAAGACAAGTCAACAGTTAGTCCAGGTAAAAGCTTGGAAACTCAACAGGATGAGAATACAAAACAGAAAATTGGAAGTTCGCAAGATAAGTCAACAGTAAGCCCAGATAAAAGCGTAGAAACTCAAGAGGATGAGAATACAAAACGGAAAATTGAAAGTTTGCAAGATAAGTCAACAGTTAGCCCAGGTAAAAGCTTGGACACTCGACAAGATGAAAATACTAGACAGAAAATTGAAAGTTCGCAAGATAAGTCAACAGTAAGCCCAGGTAAAAGCGTGGAAACTCAACAGGATGAGAATACAAAACAGAAAATTGATGTAACTTCGAAATCAGATTCACATAACAAACAAATTAGTGATGAAAATTCACCTGAAAACCCGAGCCCTCTCCGTGTACAATCAGCTAATATTGTTGAAAAGTCAGGTAGTACAAAAAGTGAAAATATACAGTCAGATAGTGTTGTCAAAGAGTCGGGCAATGCTCTTGAAGAATCAGAAAATGATATTGAAGAGTTTTCAACCATAAAAACAACTTCTAGCTCGCCTGTAAAAAATCAAAAATCTCGTGAAAAAAATCAAGATACAAATTTGAGTGACAGCGCTTACACTTCGAAAAACGAAGATCCCAACTCATCTCGTGATTCGGCTAGTCGAATTTTGTTTGAGGATGTTGATGCACCTGAGAAGTCATCTGCAGCCAATTTTGAAAAGTGTGACAAAAATGATCAGCCCGATAACCAAGCAAATGATAAGATCTCGAGTGGTACAAGTAGTGTGGAACAGGATCTAAGCCTGTTATTTTCTGACACACCTGCAGTTGACAACAATCAACAAAAGGCAACAAATGATAAAAATGAAAGCAATTCGGATTCTAATGCAACTGAGACTACATCTAAAAATCTTCAAATAGAAGATGTGATTTCTTGTAAGGAAAATGTATCTGAATTGAATACCTCGATCAAAGGTGAAAATCCTACTCCTGAAAAAGACTCTAATAATGATTATGACCAAGAAGTGCACATAAAGGAAGAAATCGAATCTATTTGGTTTGAAAATTCAAATAGTTTGGGTTTCGAAAATGAAGACAATAGCGATGCTTACAATTCAGATCAAGAACAGCTGCAGGAAGCTATGCTTGATTTGTGCAGGAAAGAATGTTTTGTTTTAGTCAGAAGGTGCGATGACTCGTTGTTAAATGTTACCAATCCTTACAAGTCTGACATGAAAAAAGTGTCAGTGGAATCGCTATCAACGTTGAATTTGACCAAAAAACATAAAATAGTGTGGTCGTATTTTATTAAGAAGACGCCAACCTTGGCCGAGTGCAAGATTTGTGGGCGAACCTTGATGCACAGGGAACTGTACAATCTGACACGGCACTTGCAAACCGTCCACGATCACAATTCGACCAACAATGACGCTGCATCTAATGAGACGCCACCAATGAAAAGAGGTCGGCCTAGGAAGGTGATAAACGTCCCCAACTCCAATAATACCACTATGTTCAAACAGCAGCCATTGAGCTACTTCTCGTTTGTCAACTCACAAACGGCCAGGTGTAAAATATGCTCTCAGTACATGCCCTACAGGTCGCTCGACGATCTTGCCATTCTAAAGTCACATTTACTTCTCAAACACTCAGATAACGCGACATCTAGCGCAACATCTAACGCAGCATCTGGCGCAAAAAGATCTGTCAGAACTGGAAACACTGAAAGTTATGTAAAAAATGATGAGGAAGATGATGAAGATGAAAACCCAAAAAGAAAACCTCGTATGCGTACATGGGCCTATTTTACCAAATTGGATAGAGGCGTGGCTCAGTGTAATATTTGCCAAAGACGCTTTCAGTGGAAGTTTGGAAATTTATGCAAACTTGAAGCTCATTTGACAATTGCACACAATATTAATAGACCGGGAAAACAGTCTAAGAAGAGGGCCGCGTCACCAACACCACCACCACAAAAGAAACAAAAGATTCAACCTGCAAAGACGAAAACCATCCCTCAAGTTACCAGTAAGAAATCTAAGGTCTCCAGCCAGGACCAATCTGGTAAACAATTTTTAAAGTTTTTCTCGTTTTTAAGATCTGATAATGCATTGTGCAAGAAGTGTAACACTAAAGTACCTTTCAATAATAAGGACACGAAAAATTTGCTCAATCATTACAACAAATGCAATCCTGAAGTGGATTTAGGCAAAAAGCGTACTACCAGGCAAGGAACAGTGTTGGACGATGCTGATGACGACGATGATGATGATGATGATGACGACGTTGATATGGGAGACGATGAGGACAAAGACCCCGATTTTGTGCCTGAAGAAGATCCGCTAGGCGGCGAAGGAGACAAAACACAATTGATGGCGGCTGTTCAATTGTCTCCCAAAGATGACGGTGCTTTCAAGAAACATTTCAAACAAATATCTTTGAACCTGGTACAGTGTGCACACTGTTCGAAGAGACTAAGGTTCCAAAAAGGCGACACTTGGCTGTTGGAACAGCACTTACAGCTGTGGCATGGCTTCAAATCCCTGCACAAGAGCCCCGATAAAGACATGGCCAACTTGGATGAAATTCCTCTACTTTTCCGGCTCAAAAATCAACCCAAGCCTTACACATTGGGTGATTGTTACAATCGCAAAAAACTACAGTACAATCTCACTGAAATCGGAAGATATTATAGGAGAGCCGGAAACAATGAATTGATTTGTAAGCTGTGTTCCAAACATATCGATTGTACCGAAACGTCAACTGAATTACTGATGTCGCATATTCTACAGGAGCATGTTCGAAAACTATTCAAACCGAAACCGGAGGATGAGAATACTAGCGCAGTTAATACTACAGTATCACCTGTGAAACAAACACCACCCAAAGTGAAATCAACTCCGCTGAGCACGCGCAAAGTGCAGGCACAGTCGACTCCGCTGCCGACTCCACCACAGTCTACTCCACAGCAGTCAACTCCTCGACGTCGAGGGGTTGCCGTAAAAAACAAAAACGTGATTACAAACGCGTTGGCCAATGAACTAGCCAAGGAAAACGAGCTCAATAGCATTGTATCCAAGTCAAGTTTCACAATGAAGTACTACCTGGAGTTTGGCAACCGACAACAGTGTAAGCTCTGCACTCGACAGTTCTCTGGTAAGAAAACCATAAACATAGTCCTTCTCACTCAGCATCTGCTCACCGATCATATGAAAAACTTGGTCGATGATGAAACCGATCTAGCAAAGGCTGACGGAAACGAACAGAGAAAAGCTATTATCACATGTACTCGACGTAGAATTGTCAATAAATTTTCGAAAACTGTTTATTCGAAAGTAGAGTGCAAAATGTGCGCTAAGATTTTTGATGCTAAGTTTGAATCGATGAAATCTCATCTATTGAATGATCATAAAAAATATCTGATAACAGTTTTGAAAGAAGTCAAAAGAATTCTGAATTACAATACTACAGATATGAGAAAAACTAAAAGGTTACTATATTTTAATAAAAAGCTTAGCTTGCAAGCCAAATGTTCTCTATGCACACGTGAAGTTCGTTATAAAGTTGGAAATACAAAACACCTCCTCCACCATCTATTGAAACTTCACAAAACAAAAGTTGCTAAAATACCTATTCCTAAACTGAAAGTATGGAAATACTTCACAAAAACTAAATATTCAGAAAACAAGTGTGAAATTTGCTGTAAGTTCATCTCTTCGAAAATTCATTGCAATCACAAATTACCGAAATTGTTTTGCTTAACAACTGGCCTGAAAACAAATCCTAGGAAAGAACTGAAATCAAAACCAGAAACGGAATCTACCGAGCTGGTAAAAGTGAAAGACAAAAAATCACCTAAGAAAGCTTGTTTCTACTTTTCAGCATTGAAACAGTACAACGCAGAGTGCATATTTTGTTCAAAAACTCTGAAAAGTGCAAATAAAATTATTTGTAAAATCGCTTGTCGTTTCAATCATGGAAATGAGTACATTAATTGGCTCTATAAAAACGATCCGGTCGATAAGACTTTTGTTTCTGGGAATCAAATTAAAGAAAATCAGAAAACACTTTCTCTACTAGAAATGTTTAATGAACTCAAGAACACAAAAATGAATAACATAAAATTGTGGTATTCGGAGCTCTCGAATAAGTACCATTGCAATCTTTGCTCTGACATCGTGAATGCAAAATTTCAGAGTTTCTGTGTGTATTTCGATCATGCATTAGTAAAACACAAAGGTTTGCTGAGTATGCACAGAGCAGTTACGAGACCGTATAGTCAACGAGGCGGATACGAATGCAATGTAAATACGGTTTCCAAGTCGCCAATCCCATCAAAAACGCCGTTGAAAAATACAAAATTAGTCAAAGTAAAGCTTTGGAATCACTTCAAGGTGACTGGAGCCGAAACTGCGTGCTGCAATTTTTGTAAGATCAAACTTCAATACACGTCCACCAATGTTGACAACTTGTCCACTCATTTACGCGTGCAACATTTGAATGATCTATTGAAACTGAGCGAACAAACAGTAAGCACTCCTCAAGCAACGAAACCCGCTGTCAAACCCGCTGTCACGCCTCGTTCTGCTAGCAAGGTAGCAAAGAATGGTGCTTGGAACTATTACATCGAAAATAATAAAGGAGCCTTATGCAGGCTGTGTGGAAAAGAGCTTCTTTTGAGTGATAAAACACAAGTGCAACCTTTGACAAAGCATCTGCTTTTGATGCATAGCATCAGGCTCTCGCCGGACGGTCAGCCTCTGGCCGAAAAAGTTCAAGCCAGCAAAGAGCAGCAGACAAAATGGGCGTGGCAGTATTTCGAGAAAGACAATGTGCGCCCATCAACAGCCAAGTGCAAACTGTGCGCCATCTACTGCAGCTCTGTCGACGAGCAAAGCGATCTGGCCTCGGTGCTACTCAAGCATCTGCGACTTGTGCACAACAAGTGGCTCGTCAATGTCGGAACTAATGCAATCAGAAACAACCTGCTGAAACGACCAGCTGACGAAGCCAGCTCACCCGGCCAGAAGAGAGTTAAGTTCGACAACTCAGTGACTGGCGGCGACAACACATCCACGTTAGACAGCGACAGCGGCCCAACAACGCCCAGCAAAACACTCACAACTCCCAAGCCCGCCTCTGGCCCAGCCACAACTCCCAAAGCAAAGAAATCGCTGAAAAATCTCCAGGAACAAGAAAAATCGAAAAGCAAAAAGAGCTTGGTGTGGACGTATTTCACGCCAATCGACGGCCAGCCGGATTTTTCAAGGTGTAATGTCTGCTCAAAAAGCATATCCAGTAAATTTGGCATCAGCATTCTACGTACCCATTTGCGTGTGAAACATAATATACTGATTGTCAACATGAATCAGTACTCGGAATTGAAAAAATCTATAGGCGATACAAGCCTAACCAACAATTCACTCAGTCCAGCTACTGGCGAGAAGCAAGCTGCTACTCCAACAAAAACTCCAACCAATTTGATGAAGAGTGAGAGTGTAGCGGATAAAAGTCACCCGGTATGGACCTACTTCAAAGAAGAGAAGAACAGTAATCTGATGAAATGCAATCTGTGTTCGGTGTACCTGTCGTGCAAGAGTGAAAAAGCGGAAGGCCTGCAAAATCATCTGAGTGCAAAGCATAATATTGTGTTCTTGGAAGCTGATCCATTGAAGAATGATAAGCCAAACACAAGTTCGGTAGCTGTAAACAAAGGTTTGCCAGATTTAAGTGCTGCAACTGCTGTGTCCAATTCAAGTTCAAGATCTATTAACAAAAGTTTGCCGGATTTGAGTTCAGCAGCATCCAAACCTGCCCAAGTTGAAGAGAAGGCCGAGCAAGCGTTGGCCAAATCTCCTACTAAAGGCCCAATGACGGCGAAAGAACTGTACGAATCGACCAAAGTAGTTGAAGAGTCGGTAGTTGAGAACGAGGTGTTCTACACCACCGAAGACAACCTGGTGACTGTGACCGACAGAGGTGACCCCAGCGCCGACGAAACCGTTCACTATGAAATTGTGGAAACAACTCAGCACTCCGAGCCGCAGTCTGCCGACATTGTCAAAGTCATCACTGAACTGTTACCGAACTACAGTGTGGGTATTTCGGACGATGTGAACGCCACTGAAATATCTCCGCAAGAATCCGATCTGATATCGAACATCGTCACTTCGCTGTCGACCAATCCTGAGGAGCAGATCGCCACCCAGCAAGCAATCATCGATGGTGATCAACTGAAGAGCATCGCCGTACTCACGGGAGAAACTGAGGACACCTCGTTGGCGTGGGACTTCTACGTGAAACTGTCTGATAAAGAGGTGAAGTGTGACGTTTGCTCTAAAGTTTTCACTTACGAAAATAAAGAATCTGCAAATCTAACTGAACACATTCAGACGAAACATCCTGCCGAACTGGCACAGTACAAACTATCTAGATTAGGGTTCAGTGACTCGTGTATAATAGTTGTGAAAAATTCAGAGTAA
Protein Sequence
MEKARSTESLDLALPSDDNPISNVEKDDISASSQQKGNSSTPEDCLNEDKNSSDRSPSKVTADLDKETLGDDDQQQKIGNSPDKSTISPSRSLGTRQDKNTRQKIESSQDKSTVSPGKSLETQQDENTKQKIGSSQDKSTVSPDKSVETQEDENTKRKIESLQDKSTVSPGKSLDTRQDENTRQKIESSQDKSTVSPGKSVETQQDENTKQKIDVTSKSDSHNKQISDENSPENPSPLRVQSANIVEKSGSTKSENIQSDSVVKESGNALEESENDIEEFSTIKTTSSSPVKNQKSREKNQDTNLSDSAYTSKNEDPNSSRDSASRILFEDVDAPEKSSAANFEKCDKNDQPDNQANDKISSGTSSVEQDLSLLFSDTPAVDNNQQKATNDKNESNSDSNATETTSKNLQIEDVISCKENVSELNTSIKGENPTPEKDSNNDYDQEVHIKEEIESIWFENSNSLGFENEDNSDAYNSDQEQLQEAMLDLCRKECFVLVRRCDDSLLNVTNPYKSDMKKVSVESLSTLNLTKKHKIVWSYFIKKTPTLAECKICGRTLMHRELYNLTRHLQTVHDHNSTNNDAASNETPPMKRGRPRKVINVPNSNNTTMFKQQPLSYFSFVNSQTARCKICSQYMPYRSLDDLAILKSHLLLKHSDNATSSATSNAASGAKRSVRTGNTESYVKNDEEDDEDENPKRKPRMRTWAYFTKLDRGVAQCNICQRRFQWKFGNLCKLEAHLTIAHNINRPGKQSKKRAASPTPPPQKKQKIQPAKTKTIPQVTSKKSKVSSQDQSGKQFLKFFSFLRSDNALCKKCNTKVPFNNKDTKNLLNHYNKCNPEVDLGKKRTTRQGTVLDDADDDDDDDDDDDVDMGDDEDKDPDFVPEEDPLGGEGDKTQLMAAVQLSPKDDGAFKKHFKQISLNLVQCAHCSKRLRFQKGDTWLLEQHLQLWHGFKSLHKSPDKDMANLDEIPLLFRLKNQPKPYTLGDCYNRKKLQYNLTEIGRYYRRAGNNELICKLCSKHIDCTETSTELLMSHILQEHVRKLFKPKPEDENTSAVNTTVSPVKQTPPKVKSTPLSTRKVQAQSTPLPTPPQSTPQQSTPRRRGVAVKNKNVITNALANELAKENELNSIVSKSSFTMKYYLEFGNRQQCKLCTRQFSGKKTINIVLLTQHLLTDHMKNLVDDETDLAKADGNEQRKAIITCTRRRIVNKFSKTVYSKVECKMCAKIFDAKFESMKSHLLNDHKKYLITVLKEVKRILNYNTTDMRKTKRLLYFNKKLSLQAKCSLCTREVRYKVGNTKHLLHHLLKLHKTKVAKIPIPKLKVWKYFTKTKYSENKCEICCKFISSKIHCNHKLPKLFCLTTGLKTNPRKELKSKPETESTELVKVKDKKSPKKACFYFSALKQYNAECIFCSKTLKSANKIICKIACRFNHGNEYINWLYKNDPVDKTFVSGNQIKENQKTLSLLEMFNELKNTKMNNIKLWYSELSNKYHCNLCSDIVNAKFQSFCVYFDHALVKHKGLLSMHRAVTRPYSQRGGYECNVNTVSKSPIPSKTPLKNTKLVKVKLWNHFKVTGAETACCNFCKIKLQYTSTNVDNLSTHLRVQHLNDLLKLSEQTVSTPQATKPAVKPAVTPRSASKVAKNGAWNYYIENNKGALCRLCGKELLLSDKTQVQPLTKHLLLMHSIRLSPDGQPLAEKVQASKEQQTKWAWQYFEKDNVRPSTAKCKLCAIYCSSVDEQSDLASVLLKHLRLVHNKWLVNVGTNAIRNNLLKRPADEASSPGQKRVKFDNSVTGGDNTSTLDSDSGPTTPSKTLTTPKPASGPATTPKAKKSLKNLQEQEKSKSKKSLVWTYFTPIDGQPDFSRCNVCSKSISSKFGISILRTHLRVKHNILIVNMNQYSELKKSIGDTSLTNNSLSPATGEKQAATPTKTPTNLMKSESVADKSHPVWTYFKEEKNSNLMKCNLCSVYLSCKSEKAEGLQNHLSAKHNIVFLEADPLKNDKPNTSSVAVNKGLPDLSAATAVSNSSSRSINKSLPDLSSAASKPAQVEEKAEQALAKSPTKGPMTAKELYESTKVVEESVVENEVFYTTEDNLVTVTDRGDPSADETVHYEIVETTQHSEPQSADIVKVITELLPNYSVGISDDVNATEISPQESDLISNIVTSLSTNPEEQIATQQAIIDGDQLKSIAVLTGETEDTSLAWDFYVKLSDKEVKCDVCSKVFTYENKESANLTEHIQTKHPAELAQYKLSRLGFSDSCIIVVKNSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-