Basic Information

Transcription Factor Domain

TF Family: CG-1
Domain: CG-1 domain
PFAM: PF03859
TF Group: Unclassified Structure
Description: CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 5.2e-31 5.5e-27 94.0 3.5 40 105 2 66 1 70 0.95

2 3 0.33 3.5e+03 -2.1 7.9 56 78 74 96 65 114 0.78

3 3 0.094 9.8e+02 -0.3 0.3 47 71 104 128 96 129 0.73

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	5.2e-31	5.5e-27	94.0	3.5	40	105	2	66	1	70	0.95
2	3	0.33	3.5e+03	-2.1	7.9	56	78	74	96	65	114	0.78
3	3	0.094	9.8e+02	-0.3	0.3	47	71	104	128	96	129	0.73

Coding Sequence: ATGCTTCTGTACAGTCGTAAGAAGGTGCGCTATCGGCGTGATGGTTACTGCTGGAAAAAGCGCAAGGACGGAAAAACCACCAGGGAAGATCACATGAAGCTCAAGGTCCAGGGAACTGAGTGCATTTACGGGTGTTACGTCCATTCTGCCATTCTACCTACGTTCCATAGAAGGTGTTACTGGTTATTACAGAAGAAGAAGAGGAAGAAGAAGAAGAAAAAGAAAAAGAAGAAGAAAGATGAAAGAGGAATTCGAAGAAAAAGTAGAAGATTGAAAAGATCAAAAGTTCAACAGAATATGAAGTTGGATAATAAGGAGATAAAGGAGAAAGGAGTGGAAAGCGAAGAGAAAAAGAATGACAAGAAGTGCACGGAAAAGATTATGAAAAGTTGA
Protein Sequence: MLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQKKKRKKKKKKKKKKKDERGIRRKSRRLKRSKVQQNMKLDNKEIKEKGVESEEKKNDKKCTEKIMKS

Sequence clustering based on sequence similarity using MMseqs2