Basic Information

Gene Symbol
Iswi
Assembly
GCA_014356515.1
Location
chr5:20291199-20311178[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.7e-05 0.03 14.7 0.0 3 41 815 854 814 854 0.95
2 2 0.0047 5.2 7.5 0.1 3 21 917 936 915 944 0.90

Sequence Information

Coding Sequence
ATGTCCAAAACAGAAGAAGAAATGGATACCGGCAATACAGGAGAAAACTCCAATGGATCAGATTCAGTTGAATCTGAATCTGCTCAGTCCGCTGACCAGATTGGACAGTTGGGTAAAATGGAAGATTTTGATACGAAAATCGAAACTGATAGAAGCAAACGATTCGACTACCTTTTGAAGCAGACCGAAATTTTCGCTCATTTCATGAACAATCCTGCCAAAACCAATCCGAGTCCTGTGAAAAAAGCTGGAAGGCCACGCAAAGACAAGGATCCCAATGGCTCGGCGAAATTGGCGGCAGCTGGTTCGTCTGATCCTGGAGATCATCGTCATCGTAAAACAGAACAGGAGGAGGATGAAGAATTGCTAGCAGAGACCAACACTAATAGGAAAGCCATCACACGATTTGATAACTCACCATTTTACATAAAAAGTGGTACCATGAGGGATTATCAAGTGAGAGGACTCAACTGGATGATTTCTCTTTATGAGAATGGAATTAACGGAATTCTCGCTGACGAAATGGGTCTTGGAAAAACACTTCAAACAATTTCTCTATTAGGGTACATGAAGCACTACAGAAACATTGAGGGCCCGCATATGGTGATAGTGCCCAAGTCAACTTTAGCTAACTGGATGGGTGAATTCAAAAAATGGTGTCCATCTTTGCGAGCAGTCTGTCTTATCGGAGACCAAGAAGCAAGAAATATCTTCATTCGTGATACGCTGCTACCAGGCGAATGGGATGTTTGTGTAACATCCTACGAAATGATAATCAGGGAAAAAAGTGTGTTCAAAAAGTTCAATTGGCGTTACATGGTCATTGATGAGGCTCACAGGATCAAAAACGAGAAGTCAAAACTGTCCGAAATTGTGAGAGAATTCAAAACTACCAACCGTTTACTGCTGACTGGTACACCGTTGCAAAATAACCTCCATGAACTTTGGTCTTTGCTGAACTTTCTTCTTCCTGATGTTTTCAACTCATCAGATGATTTCGATTCATGGTTCAACACCAATAGTTTCATAGGAGACAAACAACTCATTGAGAGGTTGCATGCGGTCCTGAGGCCTTTCCTGTTGCGTCGTTTGAAAAGTGAAGTGGAAAAGGCATTGAAACCAAAGAAGGAACTGAAGGTCTACGTCGGACTCAGCAAAATGCAACGAGAATGGTATACAAAAGTACTGATGAAAGACATAGACGTGGTGAATGGCGCTGGTAAAATAGAAAAGATGCGTCTTCAAAACATTCTGATGCAGTTGAGAAAATGCAGCAACCACCCTTACCTGTTTGACGGTGCCGAACCCGGACCACCCTACACTACTGACGAGCATCTGGTTTACAATTGCGGTAAAATGGTGATTCTGGACAAGCTGCTTCCTAAACTGAAAGAACAGGATTCACGAGTCTTGATTTTCAGTCAGATGACTCGTATGCTGGATATACTGGAAGATTATTGCTTTTGGAGAGGTTACAGTTATTGCAGACTTGATGGACAAACACCACATGAAGACCGACAACGACAAATCAATGAGTACAATGAGCCAAATAGTAAAAAGTTTGTGTTCATGTTGTCAACGAGAGCTGGTGGTTTGGGTATCAACCTGGCCACAGCTGACGTGGTCATCCTATACGACTCCGACTGGAATCCTCAGATGGACTTGCAGGCTATGGACAGAGCTCACAGAATTGGTCAGAAGAAACAGGTCAGAGTATTCAGACTGATTACTGAGAATACTGTTGAAGAAAAGATTGTGGAGAAAGCTGAGGTAAAGTTAAGGTTGGATAAACTTGTTATCCAGCAAGGAAGGTTGGTTGATAATAAGAGCGCTCTGAACAAAGACGAAATGCTGCAGATGATCAGGCACGGAGCCAATCATGTGTTCGCTTCCAAAGATTCGGAAATTACTGATGAAGATATCGACACAATACTGCGCAAGGGAGAAGCCAAATCGGAAGAGATTAAACAGAAGCTGGAGTCGATGGGAGACGAGTCAACTCTGCGAAACTTCACGATGGATGCCCCGACTGAATCAGTTTACAAATTTGAAGGCGAGGATTACAGAGAAAAACAGAAGATCATGGGAATTGGAAACTGGATAGAGCCGCCGAAGCGAGAGCGAAAAGCCAACTATGCAGTCGACGCATACTTCCGTGAGGCTTTGAGGGTGTCCGAGCCCAAGGCTCCCAAGGCGCCAAGGCCTCCCAAGCAGCCCATCGTTATGGACTTCCAGTTCTTTCCGCCTCGTCTGTTCGAGCTGCTCGATCAAGAGATCTACTACTTCCGAAAAACGGTCGGATACAAAGTTCCCAAAAATCCAGAGCTTGGCTCCGACGCTACCCGCTTACAGAAGGAGGAACAGCGCAAAATTGACGATGCACAGCCGCTATCTGATGAGGAGCTGACTGAAAAGGAGAACCTGTTGACGCAAGGCTTCACCAACTGGACCAAGCGAGATTTCAATCAATTCATCAAAGCCAATGAAAAGTATGGAAGGGATGATATTGATAACATTGCTAAGGATGTTGAAGGAAAATCACCGGATGAAGTTGTCGAGTATAGTGCAGTATTTTGGGAAAGATGTCATGAACTTCAAGATATTGACAGGATCATGGCTCAAATTGAAAGAGGAGAAGCAAAGATTCAACGAAGGGCTAGCATCAAGAAAGCTTTGGACACAAAGATGGCAAGATATCGTGCACCATTCCATCAGCTGAGAATACTCTACGGAACCAATAAAGGCAAAAACTACACCGAAGAAGAAGATAGATTTCTCGTCTGTATGCTACACAAACTTGGATTCGACAAAGAAAATGTTTATGAGGAGCTAAGAGCAGCTGTCAGGTGCGCTCCACAATTTCGATTCGATTGGTTCATCAAATCCAGAACTGCTCAAGAATTGCAAAGAAGGTGCAACACTTTGATCACATTGATTGAAAGAGAAAACCAGGATTTGGAAGAAAAAGAACGAGCCGAAAAGAAGAAGAGGGGACCTCGAGGAGCCGCTGCTAAAAGGAAAAGTGAAAATGTGGGTAGCAATACACCCGAACAAAAAACGCCGAACAAGAAAAAGAAGAAGTAG
Protein Sequence
MSKTEEEMDTGNTGENSNGSDSVESESAQSADQIGQLGKMEDFDTKIETDRSKRFDYLLKQTEIFAHFMNNPAKTNPSPVKKAGRPRKDKDPNGSAKLAAAGSSDPGDHRHRKTEQEEDEELLAETNTNRKAITRFDNSPFYIKSGTMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIEGPHMVIVPKSTLANWMGEFKKWCPSLRAVCLIGDQEARNIFIRDTLLPGEWDVCVTSYEMIIREKSVFKKFNWRYMVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSSDDFDSWFNTNSFIGDKQLIERLHAVLRPFLLRRLKSEVEKALKPKKELKVYVGLSKMQREWYTKVLMKDIDVVNGAGKIEKMRLQNILMQLRKCSNHPYLFDGAEPGPPYTTDEHLVYNCGKMVILDKLLPKLKEQDSRVLIFSQMTRMLDILEDYCFWRGYSYCRLDGQTPHEDRQRQINEYNEPNSKKFVFMLSTRAGGLGINLATADVVILYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITENTVEEKIVEKAEVKLRLDKLVIQQGRLVDNKSALNKDEMLQMIRHGANHVFASKDSEITDEDIDTILRKGEAKSEEIKQKLESMGDESTLRNFTMDAPTESVYKFEGEDYREKQKIMGIGNWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPIVMDFQFFPPRLFELLDQEIYYFRKTVGYKVPKNPELGSDATRLQKEEQRKIDDAQPLSDEELTEKENLLTQGFTNWTKRDFNQFIKANEKYGRDDIDNIAKDVEGKSPDEVVEYSAVFWERCHELQDIDRIMAQIERGEAKIQRRASIKKALDTKMARYRAPFHQLRILYGTNKGKNYTEEEDRFLVCMLHKLGFDKENVYEELRAAVRCAPQFRFDWFIKSRTAQELQRRCNTLITLIERENQDLEEKERAEKKKRGPRGAAAKRKSENVGSNTPEQKTPNKKKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01510566;
90% Identity
iTF_00857577;
80% Identity
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