Sfur010268.1
Basic Information
- Insect
- Sogatella furcifera
- Gene Symbol
- -
- Assembly
- GCA_014356515.1
- Location
- chr6:24225752-24232794[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-09 8.7e-07 28.8 0.0 3 34 32 63 30 68 0.94
Sequence Information
- Coding Sequence
- ATGCATATGGAAAATGAAGAGGACAACGTGGATCGGCCAGATCATCCAGTCACAGAAGGAAAAAGAGCCTACAAGAGATTTGCGTACACCATCGAGACACTCCAAAAGGCGATTGAAGAGGTGAAGTCGGGGAAGTCTTCAGCCAATAAAGCATCCAAGGTATTTGGAATACCAAAAGGTACACTTATCAAAAAACTCCATTCCGATGGGCCACTTGATTTGAAAATGGGCCCCTCTTCAATACTTACACCAGAAGAAGAAAGAAAACTTGAAGAATGGATTCTGGGGAAAGCAAAGCTGGGATTTCCGATGCATCCAGATGAAGTGAAAGACACTGTTGAAAAAATAATCAGAGATATAGGAAGAGAGAATCCTTTTACAAATAATCGACCAGGGAGAAAGTGGATGGATTTGTTCTTAAAACGTCATCCAAATATTGTAAAGAAGAATGCAGAGATTGTGTCAAAAGCAAGGGCTCAAGTCACCGAATTGAAAATTCGTGAGTGGTTTAGGGAACTGTCAGAATATCTGAAAGAAGAAGATGCAGAAGATATTTTGGATTGCCCCGAAAGAATTTTCAATCTAGATGAGACCGGGGTATGTATTTGTCCCAAGTCTGGGAAGCTCTTAGGGCCAAAGAGCTACAGAAACTTTTATGAAATTGCTCCTGGACCCGAAAAACAATGCATTACTGTGCTTTGCAATTTTAGTGCAGCAGGAGAGGCTCTGGATCCAATGATAGTATTTCCCTACAAGAGAATACCAAGAGACATTGCAGACTCGGTTCCCCCTGGATTTGCCATTGGTCGGAGTGACAGTGGGTGGATGGTTAGTGAGACTTTCTTTGAGTATATCGCAAATGTATTTTACCCATCACTGGTAAAATCTAATGTACAATTCCCAGTTATTATTTTATTAGATGGACATAAGTCTCATATAAATGAGCAGCTCTACAGATTCTGCAAAGACAAGAATATTCTTCTATTTTGCCTACTGCCCAATGCAACCCACATTTTGCAGCCTTGTGATGTCTCTATATTCAAACCGTTGAAATCAGCTTGGAAAAAGAGTATTCATAAGTTCAAGCAAACGACAAACAAAAGTGTATCTAGATTGAATTTCGCTCCACTGTTCCAAGAGGCATTTAAAGCTATAACCCAAGACTCAATAAAGAATGGATTCAAAGCTTGTGGGTTGTACCCCTTTAACCCTGATTCAGTAGACTATACAAAATGTATTCCTGATAGACCCAGACTGGAGTGTAGGCCTACAGAAGATCCAGAGATACAGTGTTCCAAAGATGAGTACAAAACAGCTTGTAAAGTTTTGGAAAGGGAGATGAGTGAGGAGACAAGAGTGAGTTTCATGACTGCTGTTGATAAGAATGAAGTTGAACGTGAAATTGAACCTGAATTGAGAATACTTTTCCAAATTTGGAGAAGCATGAAAGAGAAGGCAGGTGATATTCAAAGTGCAGACTGTGCAGTGACTGTTGAGAATGATGGAGAACCAGCAACAACAGAAAAACCTACTGAGGAAAGTATCAATTTATCAGACGTCCTCATCTCTTTTGAAGATGCGCAGGAACAAACAGGATTGAATGAAAGTAGTCTGACTAGAATTTTGTGTGAGGAGCCAGCTGTAGAAGTTATTGTTCGCGATGGTGCTGAAGTTGATATACAACCTTCATCTGAAAAAAGTCACAAGACAGTGGAAAATGAAGCCAGTAGGCCTATCATTGAAACTTTAAATGAGGAGCCAGCTTTGCAAGTTGTTTCTACAATAACGTCCAAATTCAATGAAGATTCACAACAAAACGATGAAGTAGCTGACACGAATCCATGGAGCAAACATTTGCATTGGCCAGTGACTGATGTGACTTCAAAGAAAAAACGAAGAATTCAAGAGAGAGTACCATTTGCTGTTACTTCAACTAAATGGAAAGCATTCCACGAAAATAAAGCGATGGAGAAAGAAATCAAAGAGACTGAAGCAAAAATAAAAAAAGAAAAACGAGAAGAAGCAAAAGCAGCTAAGCAAACTGAGAAACAAAACAAAGGAAATAGAAGGAAGCTGGATGAACCACAGAAAAGAAAAGCAAAGAAACTAAAAACTCAAGACCTACCAGACTTGACCCTGCCACCTTCAACATCATCTTCTAATCTACCAAGAAGAATTCTACCAAAACCCACCAGTACTAGGATGATAATGAATTCAATGTATGAAGGTACTCCTGAAAATAGAACTCCAGCCTGCAAGAATGGTGTAAGAAGAGTTTTATTTGAAGTAAAATTCATGCGATCTGGCCACCATCTATATGTTGGGCAGACGGCCCTGATAGCCTTCAGTAATGGGGCTGAGCCAGTGGCTCAGCTCCAAAAGGAGGTCATGAGGCCGGCTTATTGTGACTCAGATTATGCTAATGACATTGAAACCCGTAAAAGTATTTCAGGATATGTAATTTTTTATGCTGGAGGGCCTATTGCTTGGTGTTCAAGAAAGCAACCTATTGTTGCCTTATCAAGTACAGAGGCGGAATATATTGCAGCTGCTGACTGTGTGAAAGAATTATTGTATCTAAAATGCTTAGTTGAAGACTTGATAAAAGGTGAAGTAAAAGTAATTCTTAACATTGACAATCAAAGCACAATAAAATTGATAAAAAATGGCGTTTTCAATAGAAGGAGCAAACATATTGTTGTAAGATATCACTTTCTCATTGAGAAATTGAGAGAAAACAAAATAGAAATAAAGTATATTGAGAGTTCTAAAAATGTTGCTAATATCTCAACATAG
- Protein Sequence
- MHMENEEDNVDRPDHPVTEGKRAYKRFAYTIETLQKAIEEVKSGKSSANKASKVFGIPKGTLIKKLHSDGPLDLKMGPSSILTPEEERKLEEWILGKAKLGFPMHPDEVKDTVEKIIRDIGRENPFTNNRPGRKWMDLFLKRHPNIVKKNAEIVSKARAQVTELKIREWFRELSEYLKEEDAEDILDCPERIFNLDETGVCICPKSGKLLGPKSYRNFYEIAPGPEKQCITVLCNFSAAGEALDPMIVFPYKRIPRDIADSVPPGFAIGRSDSGWMVSETFFEYIANVFYPSLVKSNVQFPVIILLDGHKSHINEQLYRFCKDKNILLFCLLPNATHILQPCDVSIFKPLKSAWKKSIHKFKQTTNKSVSRLNFAPLFQEAFKAITQDSIKNGFKACGLYPFNPDSVDYTKCIPDRPRLECRPTEDPEIQCSKDEYKTACKVLEREMSEETRVSFMTAVDKNEVEREIEPELRILFQIWRSMKEKAGDIQSADCAVTVENDGEPATTEKPTEESINLSDVLISFEDAQEQTGLNESSLTRILCEEPAVEVIVRDGAEVDIQPSSEKSHKTVENEASRPIIETLNEEPALQVVSTITSKFNEDSQQNDEVADTNPWSKHLHWPVTDVTSKKKRRIQERVPFAVTSTKWKAFHENKAMEKEIKETEAKIKKEKREEAKAAKQTEKQNKGNRRKLDEPQKRKAKKLKTQDLPDLTLPPSTSSSNLPRRILPKPTSTRMIMNSMYEGTPENRTPACKNGVRRVLFEVKFMRSGHHLYVGQTALIAFSNGAEPVAQLQKEVMRPAYCDSDYANDIETRKSISGYVIFYAGGPIAWCSRKQPIVALSSTEAEYIAAADCVKELLYLKCLVEDLIKGEVKVILNIDNQSTIKLIKNGVFNRRSKHIVVRYHFLIEKLRENKIEIKYIESSKNVANIST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01353655; iTF_01353656;
- 90% Identity
- iTF_01353655;
- 80% Identity
- -