Sfur010620.1
Basic Information
- Insect
- Sogatella furcifera
- Gene Symbol
- bab2
- Assembly
- GCA_014356515.1
- Location
- chr6:5748806-5760980[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.1e-05 0.019 14.9 0.0 1 35 256 290 256 295 0.90 2 3 2.7e-11 9.8e-09 35.0 0.0 2 38 307 342 306 348 0.93 3 3 0.056 21 5.2 0.0 17 35 371 389 366 396 0.88
Sequence Information
- Coding Sequence
- ATGGCAGCTCAACCATTCTATAGTATGAAATGGGAGAACTACTTTTATCATGTTAGTGATCTGTTCCACCAACTTTTGGATTCTGGCTCTATGTCTGATGTTACTCTGTATGCCGAAGGAACAAAGTTGAACTGTCACAAAATACTCCTGTCAGCCTGTAGTCCATATTTTCAGGAAATCCTTTCGGATGTTGGTTCAAAGAATGCTGCAATCGTCATCAGCGGGATTGAAGGTGAAGATGTCAAATCGTGCATTGAGTTCATTTATAAAGGAGAGATAAATGTCAAGGCTGATCGTTTGTGTTCGGTTCTGAAAGCAGCTGATACTTTGAAAATTTGCGGACTCACTGATGTTAAGCGTGAAATAAACGAAGCAGACCCCACTATAACCGTCAACAACCAATCAGAAAAAGAAAGCGCTGGTAAACTTGTATTTAAGCGGCAATCGCCTTCGTCAAACAAAAAAACAAAGAAAAGTGCAGATACAAACAGCCATCAAAAAAGCTCCGGGGAAGAATCACCATACATCGTTCTACCCGATAATATGCTGATGCTGAAAGGTGCCGAGGAAGTAGTGGGAGAAAGCGAATTTGAAAATGTGGATGAGAATAGAATGCAATTCCAGCATGATAGTAATGAGACTGACAGCAATCAGCTGACTCTGGAGTTGAACATTGTTGATGAACCCGAATTTGTGGATTGTGATAATCTGAAAGTAGACAATATGAGAATTCTCAAAAGGAAAGAGAGTAGAAAAAAGTTATACAGTGAAGAAGCAATGCAGGCTGCCCTACAAGACATGAAATCTGGTGAGAATCTTGTAAAATGCTCGGAAAAATACAGTGTACCAAAGACAACACTATACTGCAGAGCACGAGCTATAGGTGCATGTCCGAGAATCAAGAAAAGAGGATATTGTAGAGAGAAGATGTTGGCCGCTCTTCAAGCTGTAGCAGGTGGTTGCAGCTTACAGTATGCTTCTAAAGAGTTTGGAATACCTAAAACCGTATTGTGGAGGAGAGCAAGAAAACCAAGTGAAAAAAGCTTCAACGATGAAACATTGAAACTGCAATCATTGAGTCCAAATGCGAAGGCTCGAGTTGACGATAATGTCTCTATAAGAAGGGTTTCTAAACAATTCCAGATTCCAAAAGCCACTCTGTTCAGATGGGAAAAAGTCGGTAATGCAAATAACAAAGAAACTGAGGCGATCCTTTTAGATAGTGGGGAAAGTTCTATGAATGTAGATGAGGAAGTAAGAGAAATTAAAGGTGAATTATTGTCTGTTGAAAGTGAGAACGATGATGAAATTGTCGAGGTCGCATCTTCTAGCAATATAGAAGAGGATAACAGTGATATACAAGTGAATTACCTAGAAAATTCAGCATTTTCTAATTCTTCCATAATAATATTGTCGAGGGTTGACCAACACAATGGCGAGAATAAATTCACTGATCTCACAGGAACACTTAGTGAAGAAATATTCGTGAAAAACGATGATATCGTACCTGAATCGCATCAAGAGAAAAAAGATTAG
- Protein Sequence
- MAAQPFYSMKWENYFYHVSDLFHQLLDSGSMSDVTLYAEGTKLNCHKILLSACSPYFQEILSDVGSKNAAIVISGIEGEDVKSCIEFIYKGEINVKADRLCSVLKAADTLKICGLTDVKREINEADPTITVNNQSEKESAGKLVFKRQSPSSNKKTKKSADTNSHQKSSGEESPYIVLPDNMLMLKGAEEVVGESEFENVDENRMQFQHDSNETDSNQLTLELNIVDEPEFVDCDNLKVDNMRILKRKESRKKLYSEEAMQAALQDMKSGENLVKCSEKYSVPKTTLYCRARAIGACPRIKKRGYCREKMLAALQAVAGGCSLQYASKEFGIPKTVLWRRARKPSEKSFNDETLKLQSLSPNAKARVDDNVSIRRVSKQFQIPKATLFRWEKVGNANNKETEAILLDSGESSMNVDEEVREIKGELLSVESENDDEIVEVASSSNIEEDNSDIQVNYLENSAFSNSSIIILSRVDQHNGENKFTDLTGTLSEEIFVKNDDIVPESHQEKKD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01353869;
- 90% Identity
- iTF_01353869;
- 80% Identity
- iTF_01353869;