Sfur002701.1
Basic Information
- Insect
- Sogatella furcifera
- Gene Symbol
- bab2
- Assembly
- GCA_014356515.1
- Location
- chr5:27614550-27637830[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.9e-11 1.1e-08 34.9 0.0 2 38 453 490 452 495 0.90 2 4 2.9e-12 1.1e-09 38.1 0.1 1 39 506 544 506 547 0.94 3 4 1.1e-17 4.1e-15 55.4 0.0 2 45 562 606 561 606 0.97 4 4 1.7e-17 6.4e-15 54.8 0.0 1 43 613 656 613 657 0.95
Sequence Information
- Coding Sequence
- ATGAGGAGTAAACGATTCATAAGAGATCGGGAGGAGGAGGATTGGCTGCCAGAGATGGCGGGGCAGCACTACTGTTTGCGATGGAACAACTACCAGTCGAATATGACCTCGGTGTTCCATCATCTGCTCAGGACCGAGGCATTCGTCGACGTCACACTCGCTTGCAATGAGGAGTCGCTCAAAGCTCACAAGGTTGTTTTATCAGCATGTTCATCTTACTTTCAAAAACTTCTGATGGAAAATCCATGCAAGCATCCGACCATTATAATGCCACAAGATGTTTGCTTCAGCGATCTCAAATTCATCATAGAATTTGTCTATCGAGGGGAGATTGATGTTTCACAAGCTGAGCTGCAGTCGCTGCTGAAAACGGCCGACCAATTGAAGATCAAAGGGCTGTGCGAGGTGCCCGATGGTGAGGGGGGAGGTGGTAGCGGTGAGGGCGGGGGTGAAGGTGGTGGGCGGACTGGCGACGCGGTGTGCGCCGAGGTGACGCCGCTGCCACCCGACACTCCGCACACGCGTCGCTTCACTGCTCGGCTGCGCAGCGGAACACGGCATGCCGCAGAACAGCACGCCAACAAGCGCCGCTTTGACGCCCGACGTCAGATCTACCGTGAGAGCCGACACATGATGTCGCAGCACCACCATCACAACAACAGTCACAACACCAACAACCAGCTTGCAATCCGTCATAATGAGAATCAGGGAGAAGACGGGCAGCTGTGCATTACGGTGGGCACATCGACCGACGACGACAAGTCATCGCAGTCGCTGGTGGTGCTGGATGGCAGGAGTGGGGGTGGGGGTAGCTCCCACCTACAACAGCTGCACCCGGCCACCGGCGACCAGCACTCGCGCATCATGATGACCAGTCCCGCGCCCATCATGTCCACACATTCCACTACTACTCAGGTGGTTCTTGACGCAGCCAGATCAACAGACGTGGACATGCCGGAAGGTCCGCCGCCCGCCGGCCCCACGGCCACACTCGTGTCCAGCATCGAACTGCAGACGTCGACCCCGCCCGCTGGTAAGGATTTCATTGAGGGTGTGCAAACAATGAGGAGTGAGGATGGCAAAGAGGTGAAAGTGAAATTTGAAACATTGAGAGCTATGGAACAAGGAGAGACACTGGATATTGACAGCCACATGTCTGAGAGGGGTGATGATGAACATGAACATTCAATGCATACAATGATGATTACACCTGAGTTGCTGGGCCTGATTCCACCTGGCCATTCCAGTGAATTGGACATGAACGGCAGCCAGTCTGACTGCGGCAGCAGTGTTTGCGGTAAGAACTGCGGCGGACGTGGCGAGGGCGGCGGCCCGGGCATGAACAAGAGCTGGTCGCAGGAGGACATGGAGCTGGCACTGGACGCACTGCGCAACCACAACATGAGTCTGACCAAGGCGTCTGCCACCTACGGCATTCCGTCCACCACGCTGTGGCAGCGCGCGCATCGTATGGGCATCGACACGCCCAAGAAGGACGGACCGGCCAAGTCGTGGACAGAGGACGTGCTCAACGTCGCACTCGAGGCATTGCGCAACGGAAGCATATCGGCCAATAAGGCCAGCAAGGCCTATGGTATTCCGAGCAGCACTCTGTACAAGATCGCTCGCCGCGAGGGCATTAGGCTGGCAGCGCCGTTCAACGCGGCACCCACGACGTGGAACCCGGAGGACCTGGACAGGGCGCTGGAGGCGATCCGGTCGGGTACGACGACCGTGCAGAAGGCGGCCACCGAGTACGGCATTCCGTCGGGCACTCTGTACGGCCGCTGCAAGCGCGAGGGCATCGAGCTCAGCCGCAGCAACCCGACGCCCTGGTCAGAGGACGCCATGAACGAGGCGCTCGAATCTGTCAGGATTGGCCAGATGAGTATCAACCAGGCAGCGATCCACTACAACCTGCCCTACTCGTCGCTGTACGGCCGCTTCAAGCGCATCAAGTACGAGGCAGACCACGAGCACACCAACGAGGTGGGCTCAACCAGTGACGTGGACGGCGGCGGTGCCCACACACCGCACACGCCCATGTCGGGTGGTGTGCCCACACCGCACAGTGTGCACAGCACCCACAGTGTGCACAGTGCCCACAGCACCACCTCAGCGCCCCCACCGCCCCCCTCCTCTGTGCAACAGCAGACATCGGTGCAAACCTCTCTCTCCAACGCCCCCCCTCCCCAACAGCAACACCCCCCACCACCACCCCACCCACCGATGCCCCACATCCAGCCGCAAATCATGCTGCTGCAGTACCAGCAGGCCCCTCCCCCACCCCTACACATGTACCAGCCTGCGCCCAGCTGA
- Protein Sequence
- MRSKRFIRDREEEDWLPEMAGQHYCLRWNNYQSNMTSVFHHLLRTEAFVDVTLACNEESLKAHKVVLSACSSYFQKLLMENPCKHPTIIMPQDVCFSDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPDGEGGGGSGEGGGEGGGRTGDAVCAEVTPLPPDTPHTRRFTARLRSGTRHAAEQHANKRRFDARRQIYRESRHMMSQHHHHNNSHNTNNQLAIRHNENQGEDGQLCITVGTSTDDDKSSQSLVVLDGRSGGGGSSHLQQLHPATGDQHSRIMMTSPAPIMSTHSTTTQVVLDAARSTDVDMPEGPPPAGPTATLVSSIELQTSTPPAGKDFIEGVQTMRSEDGKEVKVKFETLRAMEQGETLDIDSHMSERGDDEHEHSMHTMMITPELLGLIPPGHSSELDMNGSQSDCGSSVCGKNCGGRGEGGGPGMNKSWSQEDMELALDALRNHNMSLTKASATYGIPSTTLWQRAHRMGIDTPKKDGPAKSWTEDVLNVALEALRNGSISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWNPEDLDRALEAIRSGTTTVQKAATEYGIPSGTLYGRCKREGIELSRSNPTPWSEDAMNEALESVRIGQMSINQAAIHYNLPYSSLYGRFKRIKYEADHEHTNEVGSTSDVDGGGAHTPHTPMSGGVPTPHSVHSTHSVHSAHSTTSAPPPPPSSVQQQTSVQTSLSNAPPPQQQHPPPPPHPPMPHIQPQIMLLQYQQAPPPPLHMYQPAPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01353854;
- 90% Identity
- iTF_01353854;
- 80% Identity
- iTF_01353854;