Basic Information

Gene Symbol
ct
Assembly
GCA_014356515.1
Location
chrX:28255203-28352659[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.2e-27 2.7e-24 85.2 0.0 3 73 317 388 315 392 0.96
2 3 9.4e-31 2.2e-27 95.1 0.1 3 77 713 788 711 790 0.96
3 3 1.6e-29 3.7e-26 91.1 0.0 3 75 981 1054 979 1057 0.95

Sequence Information

Coding Sequence
ATGGATATTCAAGCCATGCAGTCCATGGACTGGCTTTTCAAGAAAGAAAGAATCTACCTGTTGGCGCAATTTTGGCAGCAGAGAGCGACACTGGCCGAAAAAGAGGTAAGTGCTCTGAAGGAGCAGTTGTCCGTCGCCAACCAGAGCTCGCTGCCCGATTCCAAGATGGCCGCCGCCACACCTGGCGAGGAGGGCAGTCGCGCCTCCATCCAAGTGGAACTCTCCGCCAAGGACAAGGAGATTTCACAGCTGGTGGAGGATGTACAGAGGCTACAGTCTAGTATAGGAAAACTACAAGAAAACTCGTCAAATCAAATAGCCCGACTCGAGGAGGAACTAGAACATAAACGACAGCATATCTGTAGATTGGAGGCGAGATTGGAAGCTCAAAGAGACTACGATGAATTGAAAAGTATTCTGAGGTCGATTGAACTGTCTCGAGGAGTGGATGGAGGAAAATGTTTCGAAACACTGCTGATGGAGAGGAGTAAAGCTGTGCAACAGTCAGAGCCAGTCGCTGTACCTTGCTCAGAACCTTCGACAATAGGAGGAGGAGGTGGAGGAGCAAAGCAGCAACCGCCGCCGCCACCACCACCGCCGCCCCAGCAGCAGCAGCAGAAAGAGGAGGAGCAGCCACCAGAAGCGGAGAGACTGAACGGAGGAGGCGCGTGTTCGCCTGCGGGAGACTCGGACGTGGTGTGCACGGGGCCGCAGCTAGTCAACGGACTGTGTGCCGGACTCAACAACAACGTCCTCCCACCTGCTCCACTGGGTTTCCCCGACGTCATCAAGAGTCCTTTCCGCTTCGACGACAGGTCTCCGTTCCGCTTTAGCGACGATCCGGGTGCCATTGTGGGCCGATTTGGGGAGTCGCTCATCCCGAAAGGCGATCCGATGGAGGCGCGTCTACAAGAAATGCTGCGCTACAACATGGACAAGTACTCCACGCAGAATCTCGACACTCTCCACATAGCGCGTCGGGTTCGCGAACTGCTCTCCATACACAATGTCGGGCAACGACTGTTCGCCAAGTATGTGCTTGGACTATCGCAAGGCACCGTTTCCGAGCTGCTGTCCAAACCCAAGCCCTGGGACAAACTCACCGAGAAGGGACGCGACAGTTACCGCAAGATGCACGCCTGGGCCAGCGACGAGAACGCTGTCCTGCTGCTCAAGTCGCTCATACCCAAGAAAGGTAAGGACACCGGGATTGCGTCAGTGTTCTCGAGGGGTGATCCGGACATCACCGAAGAGAGGATTGCGCACATTCTGAATGAGGCCAGTCAGCTGATGAAGCCGCAGCCTCAAGGTCACGAGGACAGCCGGAGCAATGATGATAGCAAATCACCAAATCATGGACAGTGTCCATCTCCATTGGGGAAGGATAGTTCCCAGAATCGGAGGATAAAGAAATACGAGAATGACGACATTCCTCAGGAGCAAGTTGTGAGGATATACCAGGAGGAGCTGGCCAAACTTATGGGCCGACGCATTGAGGACACCATGAGGGGAGATCAATCATTTCCTGGGCTGATATTCCCGCACTTCTTCGGCGCGGCAGCAGCGGCGGCCGGCGGCGAGGAGCTGCGCGTGGCGCTGGACACCTACCACCGCGAGCTGGCCAAGCTGAACGCACAGGTCGGCTGCACCGGAGTCGCCAACACAGGTCTGTTTGCCTTGCAGCAGCAAGCGCTCAACCAGCCAAACCCTCACAACGGAATGGCCCAAGACCTTTCGTTGCCCAAAATAGAGAAGAACCGAACAGCCGATCAGTCAGGCAAACTGCCAAATGGCGATATCGGCGGCGATCACACTCCGCTGAAGAAAGAAGCAGCGCCCGACAATGTGGCCGATGTTCTACGCCATTCCGGCAGCGCGTTCTCTCTAGTCAGGCCGAAAACAGAGCCTGGAATGGGCCACGTTTCCGCTGGCAGCTCAGCGAGTTCGCCTCTCGGTAACTCGATTCTTCCTCCAGAGGATTTTTCGCCTTCGGCCGCAGTCAGCCCTCTGCAGAGAATGGCTTCCATCACGAACGCCCTCATATCACAGCCCTCAACTCCTCATCATCACTCACCGTCGCAGCGACCCTTGAAAGCGGTGCTGCCACCTATCACTCAGCAACAATTCGACCAATTCAATAATCTGAATACCGAGGAAATTGTCAGAAAGGTGAAAGAACAGCTGAGCCAGTTCTCCATTAGTCAGAGGCTGTTTGGAGAGTCAGTGCTGGGCTTATCGCAAGGCAGTGTGTCCGACCTCCTAGCCAGACCAAAGCCCTGGCATATGCTCACACAGAAGGGCAGAGAGCCATTCATTCGCATGAAAATGTTCTTGGAGGATGACAATGCGGTCCACAAACTTGTAGCGTCACAGTATAAGATTGCGCCAGAGAAACTGATGAGAACCGGTGGCTATGGCGTTAGTACAAGTGCTGCAGTGTCGAAGCCACTCCCACCTTCTTCAGGCAAAATGCCTCCGATGCCTCCCAATCTGGACATCAACAAAATTGATGGCAGTGCAATGGGTGCACTCAACTACCTACATCCTCCTCAACAAATCCCACCCCCTACATCAATCCACTCAAGCTCCCCCCACCACATGCCACCAACTACCCAAGCTGCTCTGGACCAAATCAAAAAATCCCACTCGATCTCCCTGCCACAGCAGTGCACAACACTGCAACAACAACATCAACAACAACAGAATCAACATCAGAACCAGTCTCAGCACCCAATACCATCACAGGGCCAGCCTCAACAACAGCAAACACAACATCCGAATCAACAGAATCAACATCAGAACCAGCAACTACCAAACTCCAACCAACAACAGCCGAACTCGCAACAACAGCAAATGACGCAACAGCCTGGGCAACCGCAGCACATGAGAGCGTTGAATCAGCATGTTGCGCCAACGGTTTATGAGATGGCTGCTCTCACGCAAGACCTCGACACTCAGTTCATAACCACTAAGATCAAGGAAGTCCTACTCGCTAACAACATTGGTCAAAAGATATTTGGTGAAGCGGTTCTTGGACTATCACAAGGATCAGTGAGTGAGCTGCTGTCAAAGCCAAAGCCGTGGCACATGCTCAGTATAAAAGGAAGGGAGCCATTCATCAGGATGCAACTGTGGCTGACTGATACAAACAACATTGACCGACTACAAGCGATCAAAACCGAGAGAAGAGAATTGAACAAACGACGAAGAGGATCTGGACAACAAGACAACAGTAGTGACACCTCATCCAATGACACGTCAGAGTTCTACCACTGCAGCGCCAACAGTCCTCCCAGTGCCAAGAAACAGAGAGTTCTGTTCTCAGAGGAGCAGAAGGAGGCTCTGCGACTGGCGTTCACACTAGACCCATACCCCAGCCTAGCGACAACCGAATTCCTAGCCAACGAACTAACTCTGTCATCCAGAACTATCACAAATTGGTTCCACAACCACAGAATGAGGTTAAAGCAACAATCACCCCATGGTAGTGATAGTGGCCAACCAAACCGGGAAAGCCAAGGTTCAGGCTTTGATCCTGTACAGTTCAGAATGTTACTTAGCCAGAGACTTGGTCTCGCCAGTTTGCCAGGACTACCCTTCCCCCCACCATACTTCCCTCCAAATCCTGAGCTTGCCGCTCTGATTCAGCGAGGAATGCTTCCTCTGCAGGAGCAAGATGCAGGACTGGATCTCAGTGTCAAGCATGAAGGAACTGACTATGAAGACAACGATAGCAGATTGGATTCTGAGGAATCTGACTCAGGAACTCCAGAACTGACACCATGTCAGGTTCCCGAGCCACGAACGAACCGGAGGAAACCTGCTGCACCTCAGTGGGTGAATCCGGACTGGCAAGAAGAGCCAGAAGTGATAATAAACGGTGTATGTGTTATGCAAACAGACGACTACAATGAGAGGGAGAGGGAGAGAGCGAGCGAAACAGTGCGGGTGGAGCCGACGCCTGTCATGGAGGAGGATGATGATGATGACGATGACGACGACGAGGAGCACGTGACTGCCAATGATGACGATGAGCAGGAGCAGCAGGCCAAGGCGACCGACATCAAACAGGAGCCACAGCAAGCGCCGCCTCCGCCGCCACAGCAGTCACGTGACGACGACACTGAAGACGCGAGCAAGAGTGCCGCGGACGACAGTGATCGGCAGAAAGTGAAAGAGGAGAATTGGGATAGTGAATTTTAG
Protein Sequence
MDIQAMQSMDWLFKKERIYLLAQFWQQRATLAEKEVSALKEQLSVANQSSLPDSKMAAATPGEEGSRASIQVELSAKDKEISQLVEDVQRLQSSIGKLQENSSNQIARLEEELEHKRQHICRLEARLEAQRDYDELKSILRSIELSRGVDGGKCFETLLMERSKAVQQSEPVAVPCSEPSTIGGGGGGAKQQPPPPPPPPPQQQQQKEEEQPPEAERLNGGGACSPAGDSDVVCTGPQLVNGLCAGLNNNVLPPAPLGFPDVIKSPFRFDDRSPFRFSDDPGAIVGRFGESLIPKGDPMEARLQEMLRYNMDKYSTQNLDTLHIARRVRELLSIHNVGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWASDENAVLLLKSLIPKKGKDTGIASVFSRGDPDITEERIAHILNEASQLMKPQPQGHEDSRSNDDSKSPNHGQCPSPLGKDSSQNRRIKKYENDDIPQEQVVRIYQEELAKLMGRRIEDTMRGDQSFPGLIFPHFFGAAAAAAGGEELRVALDTYHRELAKLNAQVGCTGVANTGLFALQQQALNQPNPHNGMAQDLSLPKIEKNRTADQSGKLPNGDIGGDHTPLKKEAAPDNVADVLRHSGSAFSLVRPKTEPGMGHVSAGSSASSPLGNSILPPEDFSPSAAVSPLQRMASITNALISQPSTPHHHSPSQRPLKAVLPPITQQQFDQFNNLNTEEIVRKVKEQLSQFSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGVSTSAAVSKPLPPSSGKMPPMPPNLDINKIDGSAMGALNYLHPPQQIPPPTSIHSSSPHHMPPTTQAALDQIKKSHSISLPQQCTTLQQQHQQQQNQHQNQSQHPIPSQGQPQQQQTQHPNQQNQHQNQQLPNSNQQQPNSQQQQMTQQPGQPQHMRALNQHVAPTVYEMAALTQDLDTQFITTKIKEVLLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLTDTNNIDRLQAIKTERRELNKRRRGSGQQDNSSDTSSNDTSEFYHCSANSPPSAKKQRVLFSEEQKEALRLAFTLDPYPSLATTEFLANELTLSSRTITNWFHNHRMRLKQQSPHGSDSGQPNRESQGSGFDPVQFRMLLSQRLGLASLPGLPFPPPYFPPNPELAALIQRGMLPLQEQDAGLDLSVKHEGTDYEDNDSRLDSEESDSGTPELTPCQVPEPRTNRRKPAAPQWVNPDWQEEPEVIINGVCVMQTDDYNERERERASETVRVEPTPVMEEDDDDDDDDDEEHVTANDDDEQEQQAKATDIKQEPQQAPPPPPQQSRDDDTEDASKSAADDSDRQKVKEENWDSEF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01353610;
90% Identity
iTF_01353610;
80% Identity
iTF_01353610;