Sfur011916.1
Basic Information
- Insect
- Sogatella furcifera
- Gene Symbol
- kn_2
- Assembly
- GCA_014356515.1
- Location
- chr4:17465020-17517680[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.00029 3 6.2 0.1 11 55 89 135 81 144 0.69 2 3 2.7e-31 2.8e-27 95.5 0.0 23 101 188 267 174 280 0.81 3 3 8.8e-36 9.2e-32 110.3 1.0 129 183 400 454 338 462 0.92
Sequence Information
- Coding Sequence
- CGTTGTGTTGGCAAACTGCTCTTGTTAGCGACCCTCCTTACCCCCACCAGGCGATTGGCCAGCCTCAGCTGCGCCCTGATTGGCCGGGAGGCGTGGCCTCTGGCCCCCGAGAGCTTCGGCTTGCCCCGGTCCCCGTGGCCCCTGGAGTTGGACCCAGTTGCCGCCGCCTGGGGGCGCAAACTGTACCCCCCGGGGGGGCGCAATGCCCCCGGGCTTATGTTTGGGCTTCACCAGGAGCCTCATGGGGCGCGCGGGCCGCTCGCGGGCCTCAAGGAAGAGCCGCTGTCGACTTCGCAGCTCGCTGCGGCACGCTCCTGGATTCAGCCGACGGTTGTTGATCAGACCAGCGCCTTGGCTGGCGTCAATACAGTGCTGCTCTCATTAGCCGAGTCGGAGCGAGAAAGCAACTCCTCGGAGTCAAGCGCAGCCAGGCTAACCGAGAGAATACGTTACTTGCCGTCTCCTCCTCATTCTCCACCTCCTCCACGACGATTTCCTTCTCGACGACGAGCCTTTCCGCCGCAAGAACTTCCCTGCCGTCCCATGTTGGACACGGCCAAGTCACTTGCCTCCTACCCGCACAATGTCAACGAGATATTTGCGGGCAAAGTCAACTATGTTTACAGCGTTGGAGTTGGCCGAGCACATTTCGAAAAGCAGCCTCCCAGCAACCTGCGTAAATCAAACTTCTTTCACTTCGTGATCGCGCTCTACGACAGAGCTGGTCAACCTGTTGAAATTGAGAGAACGGCCTTCATCGGATTCGTTGAGAAAGATCAAGAGTTCGACAAGAACAAGATATATTCGTCAGGCTTATTGACTCGGTCACAAAGCAGACTCAAACAGTGCTTCCTCCCACTTGGTGGTGGTGTTGATCTCAGTTGCCATGGCAACCAGAGTGACTCCTATATCTCTTCATCACAAAAACTGTCGTTTTCCCTCTATACAGGGTGCGCCGAAGAGGGGGAGGGAGGGACCCTGATCCAAACTACTAGGAATCCAAAGGATTTCTTGTTTGTATACGTAATAGAAGGGGTCCCCGGATTCGATGTGGTGGTGGATCCACATGTGCATGTGTGTGTATGTGAGGTGGAGATGGTGAGGTGTGAGGGGGTAGGAGATAGAGGACATGGAATTGCATTAGACTATTTTTGTGTGCCGTGCAAGTCGCTTCGATTTGCTTTGGTTACATCCCTGGGGACATCTAGGAAGATGGCAATCATGTACGAAGGCCAGGATAAAAATCCGGAGATGTGTCGGGTGCTGTTGACACACGAAGTCATGTGCAGCCGGTGTTGTGATAAAAAGAGTTGCGGAAACCGCAACGAAACTCCTTCTGATCCTGTCATTATTGATAGGAATAAGACATTTCTTGGTAGAACTGAGCCACCCGCCAGGAAGAGGCATGGGTCTATTAAGTCACCCTACAAGACCATTAGAAATGCTACTAGTGCTGGTAGGGAGCTTGAGTTTTGCCCTTTAAGGGAGGAGGATACCAGCAAGTCGGCTACAGGAAGGGTGGTGCATCATTTTGACAACACTTCAACCCCCTGCAGCTAA
- Protein Sequence
- RCVGKLLLLATLLTPTRRLASLSCALIGREAWPLAPESFGLPRSPWPLELDPVAAAWGRKLYPPGGRNAPGLMFGLHQEPHGARGPLAGLKEEPLSTSQLAAARSWIQPTVVDQTSALAGVNTVLLSLAESERESNSSESSAARLTERIRYLPSPPHSPPPPRRFPSRRRAFPPQELPCRPMLDTAKSLASYPHNVNEIFAGKVNYVYSVGVGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPVEIERTAFIGFVEKDQEFDKNKIYSSGLLTRSQSRLKQCFLPLGGGVDLSCHGNQSDSYISSSQKLSFSLYTGCAEEGEGGTLIQTTRNPKDFLFVYVIEGVPGFDVVVDPHVHVCVCEVEMVRCEGVGDRGHGIALDYFCVPCKSLRFALVTSLGTSRKMAIMYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRNKTFLGRTEPPARKRHGSIKSPYKTIRNATSAGRELEFCPLREEDTSKSATGRVVHHFDNTSTPCS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -