Basic Information

Gene Symbol
Kdm5a
Assembly
GCA_014356515.1
Location
chrX:24132703-24192767[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.4e-17 1.2e-13 51.4 0.0 3 88 112 193 110 194 0.92
2 2 8.5 1.1e+04 -2.9 0.0 48 81 1356 1385 1346 1386 0.68

Sequence Information

Coding Sequence
ATGGAGATAGGCGACTCTTCCTCCTTTCTTAGGAGGACATGCGTCGGTGAGTGTGTGGATTGGCGTCCTAGACCAAAGTCAGGACCAATCGTAGCCCCAGATTTTAGATTTGTTTCACCTGCTTCGGCCCCTACTTTCACTCCGTCAAAGGAGGAGTTCGAGGACCCCATTCTGTACATAAGTACCATCAGACCGTATGCTGAACAATTCGGAATGTGCAAAATAATTCCTCCAGAGGATGAAGAATTCCCTTTTGTTCTGAATAAAGAAAAATTCAGATTCCAAACCAGGATTCAAAACCTGGCCAACATAGATGCATTCGCAAAGGATAAATTGATTTTTCTGGGCCGTGTCGGTAAGTTTTGGGAAATGCGAGGCTTTCCTCTGAAAACACCCATCGTGGAATATCGACAACTCGATTTATACACTCTACATAGCCTGATTTTGAGGGATGGTGGATACATGAAAGTAGTAGAAGAAGACAATTGGACAAGTGTTGCCCTACGCATGAAATACAGTGATAGTTTGAAAAGTGGTGAACTGCTCGAGAAATCCTACAGAGAAATTCTGTTACCGTATTTGAATTTAATGTCAGAAGCAGAAAAAGGAAATTTTGCTGTTACAGTTGAAGAAAACAGTGCCAACAAACAGTTGTCGGCCAAGGAAGAAACCACTACACTTTATAAATCGAAAAAAATCAAACTTTCGCCAGTGGAACCGAGAGCCTCGACAAGTCGAGATGTGGGAGTCAACGATAAAGCTGAGATTGAAGAACTCGAGAAAATGTATTCAAACACTATTCCAGAGCAAGAAGAGAGTACATCAAAATTGAAAGCTGAACTGCTGAAAGGCCCACAAAACAATTTCAAAAAACATATTCCCAAGACTTTCCCAACCAAAGCAACTGCAAGTGGCTCCAAACCAACTGAGCCTGGAAGTGACTCCAAACCAACTGAGCCTGAAAGTGATTCCAAACCATCTGAGAATGCAAGTGGCTCCAAACCAACTGAGCCTGAAAGTGACTCCAAACCATCTGAGAATGCAAGTGGCTCCAAAACACCCGAGCATGTATTCAAAGTTCCTTACCCAGTTTCTGATACCAGACACAAGAAAAGTAACGAACTGAAGAGATTACAGTTCCATGGAGCCGGACCTAGAATTGCGATTTTCAGTGAACCGGCGTCTGGAAAATCTGGCAAACGCAAACGCGAATCATCTCACAAGAAGGAATGTTGCAAATGTCGGAATAGCAACATTGACGAAATTACATTGCAATGTGCCGAGTGTCGAGACAGCTACCACTTGACATGCATCGTACCAGAACTAACTGAGATTCCAAGAGTGAATTGGCATTGCTCGAAATGCATTTTAAAGAAACTGGAAAAGTATCCATCAAAAACATCGAAACCACCATTCGAGGATGGTAAAGAGTATGACCTGCATTCATTCGAAAGAAAAGCTGGAAACTTCAAACGGGCTTTTTTCAAAGGAGATACAAATGTTTCCCCGGAACGCGTGGAAGTGGAATTCTGGAACATTTTGAGAAAAGATGATCCTGTAACTGTAGAATACGGTGCTGATATAAGTGGGGAGAATGGCACAGGATTCCCTACCCTTGAAACTCTAAAGAGCATTCCTCCTCGGCACCACGAAGAGTTGATGAGAATTGTAAAGCATCCCTGGAATTTGAACAATTTGCCGGTTTCCAATGGCTCTGTCTTCAAGTACATCGATGAGGCGATCTCGGGAATGAAGGTTCCATGGATGTACATAGGAATGTTGTTCACTACTTTTTGTTGGCATAATGAGGATCACTGGAGCTACTCCATCAACTATCACCATTTTGGGGAAACGAAGACTTGGTACAGTGTTCCCGGTGATTACGCGCAGGAATTTGAAAATGTTGTGAAGGAAATGGCACCTGGTCTTTTCGAAGTTCACCCTGACATTCTTCATCAATTGTCCACCATGATTAACCCCAATGTCCTGATGCATAAGAAAGTACCAGTCTACAGACTTGACCAAGACGCGCGAAATATTGTGATAACATTTCCCAGAGCTTATCACTGTGGATTCAACCATGGATTTAACGTTGCTGAAGCCGTCAATTTCGCTCCCCCTGATTGGATCGAAGTTGGACGCAGATGTGTCGAGAACTACGCTCTATCAAAAAGAATGTGTGTCTTTTCACAAGATGAACTTGTGTTCAAAATAGCTGCGAGACATCAAGCTGCTGATATACGTATCTGCGCCGCTGCATATCATGACTTGTACCGTGCCGTACATGATGAATTTGCATTCCGGGAGTTCTTCATGGGCGAATGGGGAGCTGACAACATAGAATGTGTGGTAGACTTCGAAACCTTACCAGATGATCAGCGGCAATGCGAATTCTGTAAGACAACAGTATTCATGTCTGGTGTCAGTTGCGGATGCGATCCTGTTAAAATTGTCTGTAGCAAACACTACGACAAATTGTGTAATTCATGCAAGCCGGAGGATCATTACCTGAAGATCAAACATACTTCAGAGGAGATTTTCCGGCTCTTTAAAGAAATGTTGAAGAGGGTTAGTCCTTATGAGATATGGGTGAAAAATGTCAGAACCGTATTGCGCAGTAACAGTCCACAACAGGAAAGACCTGGCGGTTTCACCGGAGTAGAATACTTGAGAAACTTGGTCAAAGTAGCAGAAGAGAATCGGTATCCAAATACCAAACTGCTAAAAGAACTGATTGCCTGTGTTGTGGAAGTAGAAATAATGAATGAAACTTCTGAGCGGATCTTATCTAGAATTGGGCGTGTTGAAGGAGGATCAAGATCCAGTGAAGAAGACGATGAAGGAAGACCCACTTTCATGGATTTGCTGGATTTTCTTGAAACTATCAACAACAGAGATCTGGCGTACTTTAAAGATGATGGAATTCTGAAGTATGTGAAGGATGTATTCGATTGGAGATATAAAGTTAGGACACACATTGCAAGCAATTGCAGTAACTCCAAAGACATGGAGGCTTTGAAGAAGGAAGGCGTGGGCTTTAGTCTCAATCTCATCGAAATTGACTTATTGCGCCGGTACATAACTCGATTGAAATGGCGAGAAGAACTGGATCATTTGTTTGAAAAATATAAGGATCTAACCAAGGAGATGCTTGAGGAGCACAGAGATAAAGGACTTGCATTGTATTTTGAGAAAGATTCTAAAATATCTGAAGGGATAGTCAAAATTCGCAAGCTCCTTGATCAAATCAATGCCTGGGAGAAAGAAGCACAAACTCTGATTGCAGTAGACAAAACAAAACCTACTCCAGAGGTTTTGAAAGAGTTGTTGGATCGTGGAGATGAGATAAGAGCTCGTCTGCCTTCAAGGAAAACTTTGGAAACTATTCTGCAGACAGGTGCGAAATGGGTGGAAAAGGTCATCGCTGCAAATGGTTTGAAAAATGGTCCTTATGTGGACGTGTATGAAGACCTGCTAGCTCAAACGCATAAAATCAATTTGCAGCTATATCTAACTGATCAGATTGTACTTCAGTTGGATTTGGTTAGTATTTGGAGAGAAAAGGTTGCCGCCACATTTCTCAAGAGCAACGCATTGACATTGATGGAGGCGCTTGCTCCAAGAAACGAGATTCTTAGACCTAAGAAAAAGAGAGATAATTATTTGAGCAAGAACATCATTTACGGAGTCAAGTTGAGTGGAGATACCGACCCAGGAGTCGTTGTAGCTGCTTTTAAGAGAGCTGAAAAATTCGAGTTCGAGCAGATGCTGCAATTGAGACTGGAAAATTCAAGGAAGAAAATCAACAGTGAAGCAAAGTACTGTATCTGCAGAAATGCTGATTCAGGATTCATGGTGGAGTGCTCTCTCTGTAAAGAAAAGTTTCATGGCCCCTGTTTGCAAATGGGGATTGAATCGGATATGGCTGGATCGGAATTGGCTGATACCAAATTTCTGTGCTCCACTTGTGTGAGAACCAAACGACCCAAACTGGACATCCTAGTCGAGCTGGTGCAGTCGATGCACATGATCAAAGTTCGAATCCCTGAAGGAGAAGCTCTTCAACGTTTAACCGAACGTGCGATGAACTGGCAGGATCGAGCCAGAAAGTTGTTGAGTACTCCTGAGATGACAATGGCTCTTCAAAAGCTGTATGTTCCATTACCAAATATTCCCAGACCAACCCCTCGTTTGCAACAACCGGTGAATTATGAGAGGAGTGCATCATCTACCGTCACCTCTGGTATACTCGTACAAGCTTCCACTTCAACGCCATCATCTTCTTTTGCTCCAATGGACCATGTATACTCAACCGTATCGAGAAAAACGATTCCTCCAAAGAAACACATGAGGAAATCCCCTCTAATTCCGCGAGTACTTGAAGAGCCGCCGAGAATGTCCGAGAGTGGTTTCAAGCAGCTCAAGGAGCTGATGATCCAAGGAGATCTCATGGAAGTTTTCGTCGAGGAGGCAACTTGTATATGGAAACTGCTCCAAACATTCAAGCAGCTCTACTATTCCATTTGGGATGAAGGCTATGAGGATTATGTCAGGCATGAAGCTGAAAAAGCCAAGCAAGAAGCCGCGGAACTGAAAGTTGAAAAAGGATTATCCGCGATTGAACGATTTTTCCAGGATAAGCCTTCTCCGCCACCCGCCAAGAAGCGTGCTGCTGCTGTCAACGAAGTCACGCCAACTCCAGCGAAAAGAACTGTGAAAACGCCCAGAAAAACCTCGGCAAAGAAAACGCCCAATGTTGCCACTAAATCTACTAAAGTAAAGAAACCCGAGCCTAAACAGACGAGAAAGAAGCAGAAAGCAAAGAGGCCTGCCGTTCGCCCTGCTAAAAGGGCCAAAAAGTCAAAACATGTGGATGATGACGATGATGAGAACGACGAAAATAGTTGTGAAGATGACTGCGCTGCTGAGCCTTGTAAGCGACCTACTGGCTCCTCATTGAATTGGGTTCAGTGTGATGGAGGCTGCGATCTGTGGTTCCATTTGTACTGCATTGGTTTGAACAAGGACCAGATTGATGACGACGAAGATTACGTTTGTGACAAATGTTCGTAA
Protein Sequence
MEIGDSSSFLRRTCVGECVDWRPRPKSGPIVAPDFRFVSPASAPTFTPSKEEFEDPILYISTIRPYAEQFGMCKIIPPEDEEFPFVLNKEKFRFQTRIQNLANIDAFAKDKLIFLGRVGKFWEMRGFPLKTPIVEYRQLDLYTLHSLILRDGGYMKVVEEDNWTSVALRMKYSDSLKSGELLEKSYREILLPYLNLMSEAEKGNFAVTVEENSANKQLSAKEETTTLYKSKKIKLSPVEPRASTSRDVGVNDKAEIEELEKMYSNTIPEQEESTSKLKAELLKGPQNNFKKHIPKTFPTKATASGSKPTEPGSDSKPTEPESDSKPSENASGSKPTEPESDSKPSENASGSKTPEHVFKVPYPVSDTRHKKSNELKRLQFHGAGPRIAIFSEPASGKSGKRKRESSHKKECCKCRNSNIDEITLQCAECRDSYHLTCIVPELTEIPRVNWHCSKCILKKLEKYPSKTSKPPFEDGKEYDLHSFERKAGNFKRAFFKGDTNVSPERVEVEFWNILRKDDPVTVEYGADISGENGTGFPTLETLKSIPPRHHEELMRIVKHPWNLNNLPVSNGSVFKYIDEAISGMKVPWMYIGMLFTTFCWHNEDHWSYSINYHHFGETKTWYSVPGDYAQEFENVVKEMAPGLFEVHPDILHQLSTMINPNVLMHKKVPVYRLDQDARNIVITFPRAYHCGFNHGFNVAEAVNFAPPDWIEVGRRCVENYALSKRMCVFSQDELVFKIAARHQAADIRICAAAYHDLYRAVHDEFAFREFFMGEWGADNIECVVDFETLPDDQRQCEFCKTTVFMSGVSCGCDPVKIVCSKHYDKLCNSCKPEDHYLKIKHTSEEIFRLFKEMLKRVSPYEIWVKNVRTVLRSNSPQQERPGGFTGVEYLRNLVKVAEENRYPNTKLLKELIACVVEVEIMNETSERILSRIGRVEGGSRSSEEDDEGRPTFMDLLDFLETINNRDLAYFKDDGILKYVKDVFDWRYKVRTHIASNCSNSKDMEALKKEGVGFSLNLIEIDLLRRYITRLKWREELDHLFEKYKDLTKEMLEEHRDKGLALYFEKDSKISEGIVKIRKLLDQINAWEKEAQTLIAVDKTKPTPEVLKELLDRGDEIRARLPSRKTLETILQTGAKWVEKVIAANGLKNGPYVDVYEDLLAQTHKINLQLYLTDQIVLQLDLVSIWREKVAATFLKSNALTLMEALAPRNEILRPKKKRDNYLSKNIIYGVKLSGDTDPGVVVAAFKRAEKFEFEQMLQLRLENSRKKINSEAKYCICRNADSGFMVECSLCKEKFHGPCLQMGIESDMAGSELADTKFLCSTCVRTKRPKLDILVELVQSMHMIKVRIPEGEALQRLTERAMNWQDRARKLLSTPEMTMALQKLYVPLPNIPRPTPRLQQPVNYERSASSTVTSGILVQASTSTPSSSFAPMDHVYSTVSRKTIPPKKHMRKSPLIPRVLEEPPRMSESGFKQLKELMIQGDLMEVFVEEATCIWKLLQTFKQLYYSIWDEGYEDYVRHEAEKAKQEAAELKVEKGLSAIERFFQDKPSPPPAKKRAAAVNEVTPTPAKRTVKTPRKTSAKKTPNVATKSTKVKKPEPKQTRKKQKAKRPAVRPAKRAKKSKHVDDDDDENDENSCEDDCAAEPCKRPTGSSLNWVQCDGGCDLWFHLYCIGLNKDQIDDDEDYVCDKCS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-