Sate011832.1
Basic Information
- Insect
- Smittia aterrima
- Gene Symbol
- -
- Assembly
- GCA_033063855.1
- Location
- CP093831.1:12526816-12533576[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 1.3 54 4.5 4.1 2 23 207 228 206 229 0.94 2 31 0.016 0.66 10.5 7.8 3 23 234 255 232 255 0.95 3 31 4.4 1.8e+02 2.8 1.6 3 20 283 300 281 302 0.92 4 31 4.5 1.9e+02 2.8 0.2 2 23 339 362 338 362 0.94 5 31 0.025 1 9.9 2.6 2 23 389 411 388 412 0.96 6 31 0.0012 0.048 14.1 1.7 1 23 478 501 478 501 0.97 7 31 0.15 6.1 7.5 1.7 1 23 505 527 505 527 0.94 8 31 7.9 3.3e+02 2.0 0.2 2 23 637 659 636 659 0.94 9 31 7.9 3.3e+02 2.0 8.6 1 20 663 682 663 686 0.91 10 31 0.046 1.9 9.1 3.9 1 23 736 759 736 759 0.95 11 31 8 3.3e+02 2.0 2.5 2 23 799 820 798 820 0.93 12 31 0.58 24 5.6 1.2 1 23 826 849 826 849 0.95 13 31 0.038 1.6 9.3 3.0 1 23 853 876 853 876 0.95 14 31 0.049 2.1 9.0 0.3 1 23 992 1015 992 1015 0.98 15 31 0.0024 0.1 13.1 4.4 1 23 1019 1042 1019 1042 0.96 16 31 0.032 1.3 9.6 2.7 1 23 1184 1207 1184 1207 0.97 17 31 0.02 0.84 10.2 1.1 1 23 1211 1234 1211 1234 0.95 18 31 0.38 16 6.2 2.0 1 23 1331 1354 1331 1354 0.96 19 31 1.6 67 4.2 1.4 2 14 1463 1475 1462 1479 0.87 20 31 1 43 4.8 2.9 2 23 1491 1512 1490 1513 0.94 21 31 0.23 9.7 6.8 1.8 1 23 1517 1541 1517 1541 0.96 22 31 0.0029 0.12 12.8 0.1 2 21 1608 1627 1607 1628 0.95 23 31 6.5 2.7e+02 2.3 3.5 1 23 1653 1676 1653 1676 0.92 24 31 0.52 22 5.7 2.6 3 23 1711 1732 1709 1732 0.95 25 31 0.25 10 6.8 3.5 1 23 1736 1759 1736 1759 0.93 26 31 0.0076 0.32 11.5 2.7 1 23 1770 1792 1770 1792 0.98 27 31 3 1.2e+02 3.4 2.2 1 23 1923 1945 1923 1945 0.81 28 31 3.9 1.6e+02 3.0 5.4 1 20 1951 1970 1951 1973 0.94 29 31 0.065 2.7 8.6 0.4 2 23 2003 2025 2002 2025 0.92 30 31 0.0005 0.021 15.3 1.1 2 23 2057 2079 2056 2079 0.94 31 31 0.21 8.6 7.0 2.6 1 21 2104 2124 2104 2125 0.95
Sequence Information
- Coding Sequence
- atggaCCTAAACGTCCAAACAACCAATCTCAAAACATGTCGCACTTGCTTACGCGTGCACAAAACGAGAAAGGAActgatttacattttcaattttgatgaaactttgccatatcaaaaattgaaattttctgaaatgcTAAGTTCGATTTCTAATCACGCCGTTGAAGAACGTGATGCTCTGCcaaaaagaatttgcatCATTTGCCTTCAGCAAATTCGATCGGCGtattttttcaaagttcaagCTGAAAACTCATACAGTGTTTTGCTTGGACAAGTAAGATCATCTAACCTATCGCAAACcatcaaagaagaattgcCTTCAACGAGTAACCATGAAGAAATGCTCGTAGAAATTGAACCACCAAAGCTACAAGACCACTTGAATACAACTGCTCACATCGAAAATGAAGATTCTCTCAGTGACATTATCGTCTATGATCCCGGTTTTAGTGAAGCAGAAGAGGAGCATGAAAATGGCATTCAAGTATCTCATCCGACAACATCAATAAGCAATGCTGCTACACCTGATATTGATGATAGGGAATTTTCTGACTACGAAATTGCTGTTGAACGTCAAAAAGCAGAATCTCAATTGCAGGAACTACTTGAACTTGAATGCAATGTTTGTCATAAGCAAATGATCAGCAGAACAGCTTTACTTCGTCATAAGACAAAACATCATTCACAAAGCAACTGCAAACACTGCAGAAAACGGTTTGgaagcaattttcatcttaaaACTCACATTCGATTCAAGCATCCAGACAAGTTTGATGAGTTTCGATTGAATGGTCAGATCAATGCCGTCGTGCAGGTGGAAGCACTTCCAGATCTTCTTGATTGCGATAATTGCGGATCAAAATTCCTAGACAAAGAATCTCTTTACCGACACCACTCGCATTGCGACGGAAAATGTCTAGAATGCTCAATGATAATTCCTCACAAAGAGTTCtatttcaaacatttggCAGCTGAGCATAAAATTGTTGTAGAGGAAAATACTTTATTAGAATGTCCATTCGGCTGCACTGACAAGTTCATCTCATCGAAAGTATTAGAACTCCATGTTCAGAAGAAACATCCAGAAAATGAGACGGAATCTGAGATTGCTGGTAGTATTACCGAGACAGAGGAAAGCAATAGCACTGATTCATTCTTGAAGTGTTCCGTATGCAATGCCACCTTCTGGTCGCAACGTGGGCTCTCTCATCATATGCGAAGTGTTCATCATTTCGGCTCCCCGAATGCAGAACATGCGAAACTGCCATTGAAGACGAATTCGCCGACTTAcacgaaagaagaattcataGAACGTTTCATTGttaagaaatcaaatgattttgttcGATGCACAGCCTGCAAGACGGATATTGTTAAAAAGAGCGTTTATGTTCATTTAAgacaaaaacattcttcgaTACAACCTTTCCGCTGTGAGCTTTGCCCTGAAGCCTTTTTCCGTAGCGACTATCGTCAACGGCACATGAAATATCAACATCGAGATAAATTCAACTGCACCAAATGTGATCTACAATTCGATCGAACCTACAAGTATGACGCGCATATGGTTTTCCATGGAGTTACAGCGAAGAATTTTAAACCACACGAAGGGCAAGATCTCTACGACTTACCAACAAATAACATGAAGTTCGTTGAAGATCCAAATACACACGATTATTCGATAGAGTATCCTCGTCGAATGAGCTCAACAAGTAACTGCAGCTCGTCCAACAAcggaagtttaattattgcTGAAGCTAGTATGACCAAGGATGAGTTCACTGCGAAGCATTTCAAGTTTAACGGCGACAATGATGCTCGATGCTTGGTTTGCCAACAAGACTTGAAAATTGGAAGCATTATTTCTCACTTGCTATGGAAGCATGCAACAAAAAAACCTTTAAAGTGCGCATTCTGTAATGAGAGAGTTGTGAAAGCCAATGCAAGAATTTCTCATATGGCCCGCTTTCATCCGACCGAATATAAATGCTCTCGTTGTCAAATGCAATTCTGCAAGCACGCTGAGTTGAAAAATCACAGCTTTGAATGTCACAAATTGAGAATCCCATTTCCACCAGCTGCCGGAGAAGAGAGAGATTTGACATTTGGtgaaattagatttttgtCTCATccgaacgaagaagaagttatTGAAGAACAGGAAAACGTTGAGCAAGAACCATCTACAAACGAAGCTAATTTCGTTTGTCAATATTGCGCGAAGCAGTTCACAAGTTCGAAAAATCGTCAACTTCACATAAGTCACAAACATCGTGATATCCTCACCAAATCAGtttcaaagcaaatcaactcagaaaacttttccgatgCTATGACCTTTGACAGTttccgaaagaaatttgtccAGCATGTGGATCATTTGAACATCAAATGTCTCGTCtgtcataaaatattaaagaaaaagaactttGGAAGTCACATGAAAGCGCGTCACGCTACTACAGGAGCCTTCAAATGTGCACTATGcacaaatgatttcttcCGTCCAGAGCATCGAATTCAGCACATGGCGCAAGACCATTGTGGAATGTTCTTCTGCGGCGAGTGTAATATCCAATATTGTCGGAATTCTCGATATGCGAAGCACATGAAAGAATTACATTCTATCGACATTGATGGTCCAACAACGGACGAGTGTGAGGTTGATTTATTATTGTATGAGTTGAAGTTCGTTCCACGCTCTAACAACATGGAAATGCGAAACAACGAATCGTTAGATGAAGACGAATTTCCTGAACTTGATGGTGAGGTTGAGCATTTGGAAGTACAAGTTGATGTTGCTACCGATGAAGTCCAACAAGAAGAAGGATTAAATCGTGAGGACTTTATGAAGACATACATAAAAGTCGTAAATAGGGAAATACGAAAATGCCTCGCTTgcgataagaaaatgttaaagagATCGATATACAATCATCTATTGTCACATCATGCCGCAACTCAAGCATTCAAATGTCCTTTCTGTGATCTCCGACTCGGAAGGGCTCCAGAAAGAATGCGTCATATACAGACATTCCACCCTGATGAATACAAGTGCCATGACTGCGGTGTTCAATTTCATCAGCACTCACTTTTCGCTAATCATATGCTGGAAGAGCATAACGAAACCTCAATTGCTGACAAGGctgaaggagaagaagaagatctTGATACCAACGATATAAAATATTATGCAACATTGACAGGAAGCAACAATAACAGTTACCAGGACGATGACAGCTCTATGACTGAATCCTTTACAAATAATGAAGCGTCGACATCAaccaatgaaaatttcttaatgcCATCGATCAAGCAGGAGCCAACAACATCGGGAGCAATATTGCATTCTATATTTGGTAACCAAGAGAGTTTCACTTCTGTGACCAACTCTTCAGAAGTTGAATACGAATACAATGAATTCAAgtcaaaattcattaaaagctATGATAGTGACAACTTCAAATGTATACCATGCAATCGCATTGTCATCAAGACATCTGTTTGTGCTCATTTGAGATTATGGCATGCTATTACAATGAGCTACAATTGTGAACTATGCTCAGAAGGATTCCAAAGATGTGATTATCGCCAACGGCACATGAAGTCCGCTCATGGAAAAGATTTCACGTGTATTATTTGTAATATACAATTCTATCGATCTGTTTTATATCGAAACCACATGCGACTCAATCATCAAGAAATTGTCGACGTCCCCGAACGTAAAACAATCGAACAAATCGATCCACCTCTTGAGACCTTGAAGTTCGTTaaggaaatttcatcgaataGACAGAAAAGAACTAGACTATCGTCTATTGATCAACCAATTGATGTTCCAGCTGAAGGTTTAACATTTGACGAATTTTACGCCAAGCACGTCAAAAATTGCGGCACCTATGTGATGTGCCAAGTTTGCGATGTATCGCTTACCAAATTTTCTGTAAAAAGTCATGCTAAACGTTTCCACGCCACAACTAAACCTTTCTTCTGCGAGTTGTGCAGCCATGGCTTCAATAAAACCGAAGACAGAAAGCAGCATATGGCAACgGTTCATTCTGGgcaatttaaatgtttcccGTGCAACATACAGCTCCACACGACATGCTCCTACATCGAGCACATGCAGGTCATGCACAATGAGTCATCATCAATACGGCCTTTgaaaaaagcaattgaaatcgaTGTTCCGATCGAACGTTTGAGGTTCGCTCCAATAATCAATGATAAGAAACTAATCGTATCAACAAGCACGAGTAACGCATCAACAAATGGAATGACTAGCaagacaaaagtttttgttgagaaAGGTTTATACAGCCGCGAAGAATtctattcaaatttcttcgaaGACACCGTCATTGGCGGcgagaagaagacgaaatgTACAGCGTGTCACAAGACGTTTTCTTCGCagaacaaagttttccatgTCTACAGCAATCATTCACTTCAAAAGCCACTAAAATGTGAACTGTGCCCAAgtaaattcttcttcctctcaAAGCGAGTGAACCACATGATGACGCATCATCCTACTGACTATAAATGCAAACACTGCCCACAACAACAATTTGATAGAGCTAATCTTTATATCGAGCATATGCAGCAACTTCATGGAGAAGTCATTGATATTCCAACGTTTGATGATGCGGAAGTCGAGATTCCTGCCGATCAGTTGAGATATACAAAGGATGTGACATCTGTTCAAGCAATTGCACAAAAACGACGCAACAGTGTGGATTTACCAAGAATGAAGCGTCGCGAATCAATATTGGTTAGTGAGTCTGACACATCAACTAACTCTGAACCGATGGTATGTGGAGGATGTCAAACCACTTTCGATTCATCTCGAGCATTAAGAACTCATATACGTAATTACGCTAATGGGTGTGCCAATTCTGTGGTAAACGAACTTGAAAAGatcaaagaagagaaaatagaGCCAGCATTCCAATGCGATCAATGCGAAAAGAAGTGCTTATCTTTGGTAGCTCTAAATTCTCATAAGAAGTTCAAACATGGAGACTATGTGAAGAAATCGGATGTTGTGAAGAAATCGGATGTAGTGAAGAAATCGTATGTtgcgaagaagttttctgataaaaacaaattcgatGTTCACTGTGATATTTGTAATTTCTCGTCCTACCGTCGAGATTACGTAGAGCATCATGTTCGGCAAATGCATAATCCTGAATTCCAATGCCAAATTTGTCAGAAAACATTAAGCAACTACGTTTTTTACATGTATCACATGCACGATACACATCCGAAAGCTCGTAACCATTTCCGAGCTCCTCACAAATGCAACCAATGCtacaaacaatttattaGCGACCAGAGCTTAGAATCTCATTTGATGATGCACAAAACAGAAGTCGAAAAAGAGAATAGTTGTAAAATGTGCGGAGTTGTCTATCATAATGCTGAAGGAATCGAGTTTCATCAACAATGGCATTCTCATAAGTCAATGCAACATTTcgttgaaaacattttgaagaaagGTAAGATTGTGGTCAAAACAGAACCAATCGAACAAGAAGCAATCGAATCAGCAGCATCATCTGAGGTGGAATCGCAAAATAATGATCCATTTGTAAATATGATGAGAAAGACAATTGAAGAACCAGCAAGGAAAAGAACGAAACTCTCTGAAGCAGCAGAATTGCAGATGAAAGAGCCAGAACCAACTGTTGTAGCACCAAGCGAGGAAGATAAGCTCGACTACctgaagtttatttctcAAGTTGACGGTCTCTACAAATGCGGAATTTGTGGTAAAACGAAGCAATTACGTAAAGGGATGCTGCATCATTTGAAGCAACACGACGAGGTTCCTTCATATGATTGCCATTTGTGTCCCGAGAAATTCGtgttcaagaagaaatatgATAAACATTTGGAATGCCATGCGAATGACGAGAATTTCGGCAAAGAACAGATCGACGTCGATGAACATCCAAAGTTTCAAGAAGTAGCGGTGAAGATTGAACCTATAAAGTGCGAAATTTgtgaaagctctttcaagTTGAAGATAATGTTGAACCGACACAATCAGCAATGGCACAACGAATCAAATCCTAATAAGCATCTTCCTGTGAGCgaacaaaaagcaaaaaaagaagaaaaagttcttgatgTCCCTTCAATCAAACTCTTGAAATGCAAACATTGCGCGGAAGCTTTCATTCAGCCGTCAGAGCTGGAGCATCatctcaatgaaaatcacATGTCGGATGCTGTTGAAGAACAAATAGAGGAAGAAGCATCTGATGCActtgaacaagaaaagaCTGAATCATTTCCTTGCGACAAatgcaaatttgttttcaatgagCACAAATTTTtggaaaatcatcaaaagttcttctGCGTTTTTGGCCAGGCCAGAACAGAACAAGTTGTTAATGAACAATAA
- Protein Sequence
- MDLNVQTTNLKTCRTCLRVHKTRKELIYIFNFDETLPYQKLKFSEMLSSISNHAVEERDALPKRICIICLQQIRSAYFFKVQAENSYSVLLGQVRSSNLSQTIKEELPSTSNHEEMLVEIEPPKLQDHLNTTAHIENEDSLSDIIVYDPGFSEAEEEHENGIQVSHPTTSISNAATPDIDDREFSDYEIAVERQKAESQLQELLELECNVCHKQMISRTALLRHKTKHHSQSNCKHCRKRFGSNFHLKTHIRFKHPDKFDEFRLNGQINAVVQVEALPDLLDCDNCGSKFLDKESLYRHHSHCDGKCLECSMIIPHKEFYFKHLAAEHKIVVEENTLLECPFGCTDKFISSKVLELHVQKKHPENETESEIAGSITETEESNSTDSFLKCSVCNATFWSQRGLSHHMRSVHHFGSPNAEHAKLPLKTNSPTYTKEEFIERFIVKKSNDFVRCTACKTDIVKKSVYVHLRQKHSSIQPFRCELCPEAFFRSDYRQRHMKYQHRDKFNCTKCDLQFDRTYKYDAHMVFHGVTAKNFKPHEGQDLYDLPTNNMKFVEDPNTHDYSIEYPRRMSSTSNCSSSNNGSLIIAEASMTKDEFTAKHFKFNGDNDARCLVCQQDLKIGSIISHLLWKHATKKPLKCAFCNERVVKANARISHMARFHPTEYKCSRCQMQFCKHAELKNHSFECHKLRIPFPPAAGEERDLTFGEIRFLSHPNEEEVIEEQENVEQEPSTNEANFVCQYCAKQFTSSKNRQLHISHKHRDILTKSVSKQINSENFSDAMTFDSFRKKFVQHVDHLNIKCLVCHKILKKKNFGSHMKARHATTGAFKCALCTNDFFRPEHRIQHMAQDHCGMFFCGECNIQYCRNSRYAKHMKELHSIDIDGPTTDECEVDLLLYELKFVPRSNNMEMRNNESLDEDEFPELDGEVEHLEVQVDVATDEVQQEEGLNREDFMKTYIKVVNREIRKCLACDKKMLKRSIYNHLLSHHAATQAFKCPFCDLRLGRAPERMRHIQTFHPDEYKCHDCGVQFHQHSLFANHMLEEHNETSIADKAEGEEEDLDTNDIKYYATLTGSNNNSYQDDDSSMTESFTNNEASTSTNENFLMPSIKQEPTTSGAILHSIFGNQESFTSVTNSSEVEYEYNEFKSKFIKSYDSDNFKCIPCNRIVIKTSVCAHLRLWHAITMSYNCELCSEGFQRCDYRQRHMKSAHGKDFTCIICNIQFYRSVLYRNHMRLNHQEIVDVPERKTIEQIDPPLETLKFVKEISSNRQKRTRLSSIDQPIDVPAEGLTFDEFYAKHVKNCGTYVMCQVCDVSLTKFSVKSHAKRFHATTKPFFCELCSHGFNKTEDRKQHMATVHSGQFKCFPCNIQLHTTCSYIEHMQVMHNESSSIRPLKKAIEIDVPIERLRFAPIINDKKLIVSTSTSNASTNGMTSKTKVFVEKGLYSREEFYSNFFEDTVIGGEKKTKCTACHKTFSSQNKVFHVYSNHSLQKPLKCELCPSKFFFLSKRVNHMMTHHPTDYKCKHCPQQQFDRANLYIEHMQQLHGEVIDIPTFDDAEVEIPADQLRYTKDVTSVQAIAQKRRNSVDLPRMKRRESILVSESDTSTNSEPMVCGGCQTTFDSSRALRTHIRNYANGCANSVVNELEKIKEEKIEPAFQCDQCEKKCLSLVALNSHKKFKHGDYVKKSDVVKKSDVVKKSYVAKKFSDKNKFDVHCDICNFSSYRRDYVEHHVRQMHNPEFQCQICQKTLSNYVFYMYHMHDTHPKARNHFRAPHKCNQCYKQFISDQSLESHLMMHKTEVEKENSCKMCGVVYHNAEGIEFHQQWHSHKSMQHFVENILKKGKIVVKTEPIEQEAIESAASSEVESQNNDPFVNMMRKTIEEPARKRTKLSEAAELQMKEPEPTVVAPSEEDKLDYLKFISQVDGLYKCGICGKTKQLRKGMLHHLKQHDEVPSYDCHLCPEKFVFKKKYDKHLECHANDENFGKEQIDVDEHPKFQEVAVKIEPIKCEICESSFKLKIMLNRHNQQWHNESNPNKHLPVSEQKAKKEEKVLDVPSIKLLKCKHCAEAFIQPSELEHHLNENHMSDAVEEQIEEEASDALEQEKTESFPCDKCKFVFNEHKFLENHQKFFCVFGQARTEQVVNEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -