Basic Information

Insect: Smittia aterrima
Gene Symbol: Rreb1
Assembly: GCA_033063855.1
Location: CP093831.1:19142789-19147729[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 5.3e-05 0.0022 18.3 1.0 1 23 141 163 141 163 0.98

2 14 0.00044 0.018 15.4 0.2 1 23 176 198 176 198 0.98

3 14 6.7e-06 0.00028 21.1 5.2 1 23 204 226 204 226 0.98

4 14 0.074 3.1 8.4 3.8 2 20 331 349 331 351 0.94

5 14 1.6 68 4.2 0.1 1 21 396 416 396 417 0.87

6 14 0.021 0.87 10.1 0.2 1 23 551 573 551 573 0.97

7 14 3.9e-05 0.0016 18.7 0.7 1 23 582 604 582 604 0.99

8 14 0.0021 0.089 13.3 2.3 1 23 610 633 610 633 0.97

9 14 0.0012 0.052 14.0 2.1 1 23 957 980 957 980 0.95

10 14 0.00012 0.005 17.2 0.4 2 23 1238 1259 1237 1259 0.97

11 14 0.13 5.6 7.6 4.2 1 23 1265 1288 1265 1288 0.96

12 14 0.079 3.3 8.3 2.4 1 23 1364 1387 1364 1387 0.97

13 14 0.016 0.65 10.5 0.6 3 23 1432 1452 1430 1452 0.95

14 14 0.067 2.8 8.6 6.2 1 23 1458 1480 1458 1480 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	5.3e-05	0.0022	18.3	1.0	1	23	141	163	141	163	0.98
2	14	0.00044	0.018	15.4	0.2	1	23	176	198	176	198	0.98
3	14	6.7e-06	0.00028	21.1	5.2	1	23	204	226	204	226	0.98
4	14	0.074	3.1	8.4	3.8	2	20	331	349	331	351	0.94
5	14	1.6	68	4.2	0.1	1	21	396	416	396	417	0.87
6	14	0.021	0.87	10.1	0.2	1	23	551	573	551	573	0.97
7	14	3.9e-05	0.0016	18.7	0.7	1	23	582	604	582	604	0.99
8	14	0.0021	0.089	13.3	2.3	1	23	610	633	610	633	0.97
9	14	0.0012	0.052	14.0	2.1	1	23	957	980	957	980	0.95
10	14	0.00012	0.005	17.2	0.4	2	23	1238	1259	1237	1259	0.97
11	14	0.13	5.6	7.6	4.2	1	23	1265	1288	1265	1288	0.96
12	14	0.079	3.3	8.3	2.4	1	23	1364	1387	1364	1387	0.97
13	14	0.016	0.65	10.5	0.6	3	23	1432	1452	1430	1452	0.95
14	14	0.067	2.8	8.6	6.2	1	23	1458	1480	1458	1480	0.98

Sequence Information

Coding Sequence: atggaaCGGCGTGCATCGACTAATTCTGAATCATCGATTGAACCGGCAGAAGTGAGTTCATCGAACAAGACGCTCAGTTCCGACGCCAATTCATCGCTCGCACTCAAAACGAGTCACGAAAGTGATAACATCGAATCagatgagaatgaaaacgaCGATTATCTGAACAACAACACGTGCAAAGACAACACAATCGACAACGAAAAGACAAAACTTGTCAACAACAACTCTCAAGACAAAGAAACAACAGTTCGTCGCGCTAATCTCCGACAATTGATGGACAAAATgctgcaaaagaaaatcatgaaCGCAACGAAAAACAACAACTATAGCTCTGAAGAGAACTTGAACGCTAGTCTTGAAACTTCTGAAAGTTTTGGAAACGAAAATGACACAACGAAAGCGTCTGAAGAGACAAAGTACGTTTGCCCTATCTGCGAAACCGTCTCGACAACGCAACACGATTTCACCAATCACATTCGCAATCATAACAACATCCGCGACTCGTCTGACGACGGAACTTCGTTCACATGTCGAATCTGctcaaaagttctttcatcTGCTTCCTCGCTCGATCGTCACGTGCTCGTTCATACTGGCGAACGTCCTTTTAATTGCAAATATTGTAACTTAACATTCACAACGAACGGCAATATGCATCGACACATGAGAACTCACAAACAACCGCAACAACACGACCGTGAGAGTTACGAAAGCGATGGATCGACAGATTCCAGCGGTAGCAGTCATGGTGGTGGTGCAAGAAACTTGATCAAGTCGAACCAAAATTTTCCACATAAACGAAAAAGCACCGACGATGATCTCACAAATCGACGAAAAGTCTCAAGAACTGTAAATCACAATAATAACAATATCATGTCACCTAACAGCCAACAGAAGTTCTGTTGCCCAGTTTGTATTCGCAATGACTTCGCTAACATGATCAGCTTAGAAAATCATATGGACAAGGAACATCCGACGATTCCTGCAAAGTGTCGTCACTGCGAAATGGTTTTCAAAAGTCATAAAGCACTCAATGCTCATCGCTGCGGTAATAACAAAGCTATCAATATTCAGCAAGGCTTCAAAGACTTGACTTTCGTCGACTTCACTAGCGAGAGTTTTCCACTCATTGCCAAAAGTTTGTGTGAGCAAAGCATTCGAACGCCAATTACAACACAGAAGTTTGAATGCCCATTGTGCTATCGAGCTTTTCCTTGCGCTAGTGCtgttgaaattcatttgaaagatTGTAAAAGCGAGAACTTTGCTGCTCAAGACTTCTCAAAGCGAAAACGCTCAAATAGTGAATCATCTGAAGAGGACGTGAAAcgagaagatttctttgctAATTTGGCACTTCAAAACCGGTCAATTCCAACTTCAGCTCCCTCTACCCCATCGTCAAATGCTGATAAATCGTTCACCTCGCCAATGATGATCAAGCAAGAGCTTCGTTCGACACCTCCGTTTTATCAATATTTCTCTGAAGGTCGTGACTTCGCTGATATTGAATCCATGATTAAAGCAACTTCATCTGGGGGATTGGAGAAGCCTATGTCAGAAAAGGATCAACAATTATAtcgcgaagaagaagagaatcaGGATGCTTTTACTCATGAATTCCGAAAAATGAAGCTTCGAGGAGAATTCCCTTGCCGTCTCTGCACGATGGTTTTTCCAAACCTTCGAGCATTGAAAGGCCACAACCGCATTCACTTGAGTGCTGCAGGTCCGGGTCCTTATCGCTGTAACATGTGCCCGCATTCCATTAATGACAAAGCAGCGTTGATTCGTCACATGAGATCACATAACGGTGATCGACCTTACGAATGCGCGCTTTGTAATTACGCTTTCACTACCAAAGCAAATTGCGAACGTCACTTGCGCAATCGTCACGGAAAAACAACTCGAGATGAAGTAAAGCGAGCAATCATTTATCATCCATCAGAAGACTCAAGTGTCGAAGATCACAGTAAGAAAATCGCTCTCTACTCGACAAACCGATTCCAAAGCAGCACTCATGATGATAGTTTGAGCGGACGTAGCACTCCAGTCTCGCACttgaaggaaattcttcAGCCACAAGATGACTCACCGTCTCGCATTCAAGTCAAGAGCTtggataaattgaaatcacaGAGAAATTTCGAGAATgacattgaagaagaaatgaatgaCTCTCATCGCGCCGTCGATATGTCAATGGATGCTTTGGACTTGAGCAAGAAAACCGACTCATTCATGAACAATGGCGACGATGCTTCtgatgaagacgatgaagatgatttaGAACATAATGGAGACGACTTGGACCATCCTGAGATTCCCAAATTTGATCTCGGAATGTTGGAGAAGAATCTCTTAATACAACAACAACTTTTGAGTGAAGCTCTTCCGAAGTTGGATCCAGCTCAAATGTTCAACTTGGCTCAAATGTATCGAACATTCGGTTTTCCAACTCCTGGTTTTCCGATTCACCCAGCGTTGCTCTTGCAAAATCCAATGCTTTTGAACGATACgatgaaaaacttcttttcgaAAGATATGATGTCGCCGACTCCACCCCAAACTAATGCGACCCAAAATCAAGGACCGCCAAGCATGTCAGGAGGGAGTTTGATTATCAATCCTTTTGCATCACCTGACTCATCGCCAACTGGCCCTCCAACGCAAATCTCTCGGTCGATGTCGCCAGTCAGAAATTCAATTCCTATTCCTCCATTTCCACCAACACCTCAAGAATCGCCAAAGAAGTCATCTACACCAAATCACAACTCTCATCACACAGGACCCGTCAAGATGGTCATTAAGAATGGTGTATTGATGCCAAAGCAGAAGCAACGACGGTATCGCACAGAGCGCCCATTCGCATGTGAGCATTGCTCAGCGAGATTTACTTTGAGATCAAATATGGAGCGACATATAAAGCAACAGCATCCTCAGTTTTGGGCGCAACGTCAACGTGGAAATCATGGATTGATGAGACGTGGACCTCCATCTCAATCTATGAATGGACCTCCAATGATGCCTACATTACATGCGTCGGGGTTTGGGGGAATTTCTGATGAAGTCAAATACGCGATTCTCGCTCAACAATTGAAGGCTCGTCAAAGCCCAAAGAGCATGTCATACCCACACATGCAAATGCCATTGCAAACTCAGTTGACGGAGCTGCCAACACCTGAAGATGgacaagaaaaatctttctcacCTGGCCTATTGAaggaagatgatgatgaagatcCTGAGTTGGTCAttgatgaagatttcaatgcTGAAGATTTAAGCAAATCATCTGATAGCAATGAAAAGATGTCAGCTGCCCGAAAAACtgctgaaaacattttggaAGAAGCTAAGAAGATGTGCAATAACGCAAAAGGCATTGACAGTCGTCCAAAATATCAGTCGCAGAGCGACTgtgaaaatgagaaagaagtAGAAAAGgagataaaaaaagaaagcaaagacGAGACTAATGATTTGGTTCCAATTTCAAAGCTTGTTGACAACGCAACAAATTCAATgatgttttcaaaatattttagTCGTCCAGAGCCACCAATGGCTGATCAGAGTGATGAAGAAGGTCTCGTCGCGTCGGGAAGTGCTTCAGAAAGCAATAACTCAGGCACTGATGACCCACATCCATCGAGTTCaaataaagagaagaagaaatcagcTTACAGTTTGGCTCCCAATAGAGTTTCATGTCCTTACTGTCAACGCAAATTTCCATGGTCAAGCTCATTACGTCGTCACATCTTGACACACACAGGTCAAAAGCCATTCAAATGCTCGCAATGTCCATTGCTGTTCACAACGAAGAGCAATTGCGATCGTCATTTGTTGAGAAAGCATGGTAATGTTGAGTCAGCTGTCTCATTACAACTGCCAATCGATGAAATGCCAGAACCAGTCAAAGAGCCTGTTAGACCATCGCAACAACAAATGCCTGTTGTCGAAGAATCAACGAAGCCAATCGCACCTTACAGTCTCTCAGCAGCCCttcaaatgcaaacaaaCATCAAAGCAGAAAGCAATTCCCCAAACTCATCAGCTCCAGTCATGTCGAGCGATCTTCCTTTCAAATGTCATCTCTGTGATGGCTCTTTCGTTGACCGTGTCAACTGTTTGGAGCACATCAAGGTGACGCATGCTCAAGATTTTGCAGTTTTGATGTCAAAGGTTCAGCTCGAAACAGAAGACGGTCTACATGCATCGCCTGATGATGAAGAACATGCAGACAAGAAGGGAAAATATCCCGACTATGCTAATCGTAAAGTGATTTGCGCATTTTGCTTGAGACGCTTTTGGTCTACAGAAGATTTACGTCGACACATGAGAACTCATAGTGGCGAGCGACCTTTTAACTGCGATGTCTGCTTTAGAAAGTTCACCTTGAAGCACAGTATGCTGCGTCATCGTAAGAAGCACTCGAATGCTCCTAATCACATGAGTTTCCAAAGCATGAAATTAGAGAATGGAGACAACAACGGTAATGGATCCAGTATTAACAACAGCGCTTCTGACATGTCTGATGATGAATCGTCAACTCTCGCTATGATTaacaacaagaaattgaTGGAGATGATGCCACCAAAACCTGATCACGACGCAATAAATCGTATGATGACTCCGTTTAACAAAGAACTCTTTATGAAGTTCcaggaaaagttcttcaataTGCAACAGCAACAAGCCGGCTCTGATTTGCTCAGCAATCTTCTCGGCATCAGCGACCAAGGTGTCTTGAATCAAATGTTTAGCTCTTCACCTGACGAAGCGGCAAAAATGCTCGGTGTTGagaagtaa
Protein Sequence: MERRASTNSESSIEPAEVSSSNKTLSSDANSSLALKTSHESDNIESDENENDDYLNNNTCKDNTIDNEKTKLVNNNSQDKETTVRRANLRQLMDKMLQKKIMNATKNNNYSSEENLNASLETSESFGNENDTTKASEETKYVCPICETVSTTQHDFTNHIRNHNNIRDSSDDGTSFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCNLTFTTNGNMHRHMRTHKQPQQHDRESYESDGSTDSSGSSHGGGARNLIKSNQNFPHKRKSTDDDLTNRRKVSRTVNHNNNNIMSPNSQQKFCCPVCIRNDFANMISLENHMDKEHPTIPAKCRHCEMVFKSHKALNAHRCGNNKAINIQQGFKDLTFVDFTSESFPLIAKSLCEQSIRTPITTQKFECPLCYRAFPCASAVEIHLKDCKSENFAAQDFSKRKRSNSESSEEDVKREDFFANLALQNRSIPTSAPSTPSSNADKSFTSPMMIKQELRSTPPFYQYFSEGRDFADIESMIKATSSGGLEKPMSEKDQQLYREEEENQDAFTHEFRKMKLRGEFPCRLCTMVFPNLRALKGHNRIHLSAAGPGPYRCNMCPHSINDKAALIRHMRSHNGDRPYECALCNYAFTTKANCERHLRNRHGKTTRDEVKRAIIYHPSEDSSVEDHSKKIALYSTNRFQSSTHDDSLSGRSTPVSHLKEILQPQDDSPSRIQVKSLDKLKSQRNFENDIEEEMNDSHRAVDMSMDALDLSKKTDSFMNNGDDASDEDDEDDLEHNGDDLDHPEIPKFDLGMLEKNLLIQQQLLSEALPKLDPAQMFNLAQMYRTFGFPTPGFPIHPALLLQNPMLLNDTMKNFFSKDMMSPTPPQTNATQNQGPPSMSGGSLIINPFASPDSSPTGPPTQISRSMSPVRNSIPIPPFPPTPQESPKKSSTPNHNSHHTGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQFWAQRQRGNHGLMRRGPPSQSMNGPPMMPTLHASGFGGISDEVKYAILAQQLKARQSPKSMSYPHMQMPLQTQLTELPTPEDGQEKSFSPGLLKEDDDEDPELVIDEDFNAEDLSKSSDSNEKMSAARKTAENILEEAKKMCNNAKGIDSRPKYQSQSDCENEKEVEKEIKKESKDETNDLVPISKLVDNATNSMMFSKYFSRPEPPMADQSDEEGLVASGSASESNNSGTDDPHPSSSNKEKKKSAYSLAPNRVSCPYCQRKFPWSSSLRRHILTHTGQKPFKCSQCPLLFTTKSNCDRHLLRKHGNVESAVSLQLPIDEMPEPVKEPVRPSQQQMPVVEESTKPIAPYSLSAALQMQTNIKAESNSPNSSAPVMSSDLPFKCHLCDGSFVDRVNCLEHIKVTHAQDFAVLMSKVQLETEDGLHASPDDEEHADKKGKYPDYANRKVICAFCLRRFWSTEDLRRHMRTHSGERPFNCDVCFRKFTLKHSMLRHRKKHSNAPNHMSFQSMKLENGDNNGNGSSINNSASDMSDDESSTLAMINNKKLMEMMPPKPDHDAINRMMTPFNKELFMKFQEKFFNMQQQQAGSDLLSNLLGISDQGVLNQMFSSSPDEAAKMLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00346954;
90% Identity: -
80% Identity: -