Sate007616.1
Basic Information
- Insect
- Smittia aterrima
- Gene Symbol
- su(Hw)_1
- Assembly
- GCA_033063855.1
- Location
- CP093830.1:14958501-14960477[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.99 1.3e+03 -0.6 0.1 19 24 48 53 45 57 0.84 2 10 0.11 1.4e+02 2.5 1.1 17 39 118 137 110 143 0.75 3 10 0.0015 2 8.5 0.1 19 40 154 172 149 178 0.92 4 10 0.27 3.7e+02 1.2 0.1 17 29 184 196 174 208 0.76 5 10 0.37 5e+02 0.8 0.3 18 41 243 263 232 271 0.75 6 10 0.049 66 3.6 3.5 17 39 270 289 257 293 0.74 7 10 1.1e-05 0.014 15.3 2.5 14 42 295 320 284 322 0.83 8 10 0.0029 3.9 7.5 1.9 12 41 322 353 318 356 0.74 9 10 0.1 1.4e+02 2.6 0.3 18 29 356 367 351 377 0.84 10 10 1.9e-05 0.026 14.5 4.8 17 44 383 407 373 407 0.90
Sequence Information
- Coding Sequence
- ATGGGTCGCTCAAAAAGAGGCTCcagaaaagaaacgaaagctGAGTCCACCCcagaaactaaattttctcaatcgAAACAACAAGTGCCGGAAGCTACTGAAGTTATTGCTGTCTCTGTTTTGGAATCTCCACTCTTCCTATGTCGATACTGCCGTGATTCCTTTGAAACTGCAGAGGAATACTCGCAACACCAATGTCCAGCGCAAACATATACCGTCGCAATCGAAGAGTCAAAGGAGCTTCCTGTGCAGATTGAAGAATCTAAGGAAGAAAAGCCTGAAAAGCGTCCTCGGAAACCTTACAAGAAAcgtgagaagaaaagtgagGAAGATAAAACCGTGAAAGAACCAGTTAATTGCCCAACATGCAATAAATCGTTCACTCGAAAATACCACCTTGAGCGGCATTTAATTCACACTAGTTGTAATCCTGGAACATACGTACGAGAAGAGTTTGCATGTGAGGTCTGTGACAAGAAATTCTCTCGTATTGATAATCTACGAATGCATTTACGGGCTCATCTTGGACAGAAGCAACGATCTCGCGATTTCCAATGTCCATTCtgcgagaaaagtttctatgGTTCGAGTTTGTTAAATATACATGTTAGAACACATACTCTCGAAAAACCATATCCATGCGACTGGAAAAATtgtggaaaaagttttccttcttcaggAGCGCTGACAAAACACAGGCGAGTACATACTGGCGAGAAGCCTTATTCGTGTCCCACATGTGGCAATCGTTTTGCTGcaaaggaaactttaaacaGACATGTTCGAACTCACACTGGAAGGCGAGATCACAAGTGTAATATTTGTGgtaaagaatttattcaaaacacTCAGTTGAAGGCTCATATGTTTTACCACAACGGCGAGAACGCTCTTATCTGCGATCACTGtggaaaacaattcaataGAAAAACCAGACTTCGTGAGCATCTCGAGTATATTCATCTCAAGAAGGAAATGCCTACGTGCAATATGTGCAACAAGAAATTCATGCGACGAGAGGATATGAACCGACATATCGAAACGCATGTTGGCGAACGAGCTCATTCGTGTAATGtatgcgaaaaaaaattcgtaaCGAAAGCAGCTGTCCGAATTCACATgCGAGTACATCAAGTTGAAGAACCTGCTTGTTGCAGCTATTGTggtaaaaactttcttcgaaTGGATTGTCTCGTCCGTCATATGCGTTCAAAGCATCGTGATGCActtcaacaaattattgttgaagcggaaacaaagaaaattattcaaatgctAAACAAGGACGATGAGATAGAAATTATCTATCTTAACGACGACACACAACCGCAAGACGCTGATGAGATTTACGAAATTTTACCAACtaacgaagaagatgaagcgCCCATATTCCTGGATGATGAGCTGCTAAAAAAACGAATCTCTGAGTTATTACAAATTGTCATCGAAGAAAGTTTGCTCAAGGAACTTGGTTTCGGTGTGAAACCAATCGATGATGTCATGTCTTCTGTCCTAGAAAAGTGCAGTAGAACTCCActaacaaaagaaaacggCGATGACGATGAATCCACTCGCTTGAGAGAAAACACCAAGCAGCTATTTTCAATGGTCCTTGATGAGGATcacattaaaagtttattaaacaaTTACACAGTCGATGAAGTAATTACGATCGTTTTGCGAATggcaaaatga
- Protein Sequence
- MGRSKRGSRKETKAESTPETKFSQSKQQVPEATEVIAVSVLESPLFLCRYCRDSFETAEEYSQHQCPAQTYTVAIEESKELPVQIEESKEEKPEKRPRKPYKKREKKSEEDKTVKEPVNCPTCNKSFTRKYHLERHLIHTSCNPGTYVREEFACEVCDKKFSRIDNLRMHLRAHLGQKQRSRDFQCPFCEKSFYGSSLLNIHVRTHTLEKPYPCDWKNCGKSFPSSGALTKHRRVHTGEKPYSCPTCGNRFAAKETLNRHVRTHTGRRDHKCNICGKEFIQNTQLKAHMFYHNGENALICDHCGKQFNRKTRLREHLEYIHLKKEMPTCNMCNKKFMRREDMNRHIETHVGERAHSCNVCEKKFVTKAAVRIHMRVHQVEEPACCSYCGKNFLRMDCLVRHMRSKHRDALQQIIVEAETKKIIQMLNKDDEIEIIYLNDDTQPQDADEIYEILPTNEEDEAPIFLDDELLKKRISELLQIVIEESLLKELGFGVKPIDDVMSSVLEKCSRTPLTKENGDDDESTRLRENTKQLFSMVLDEDHIKSLLNNYTVDEVITIVLRMAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01353026;
- 90% Identity
- iTF_01353026;
- 80% Identity
- iTF_01353026;