Sate008447.1
Basic Information
- Insect
- Smittia aterrima
- Gene Symbol
- ttk_2
- Assembly
- GCA_033063855.1
- Location
- CP093830.1:19004350-19006730[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.9e-12 4.1e-09 36.0 0.0 3 43 464 504 462 506 0.90 2 2 0.27 1.8e+02 1.9 0.3 4 20 604 619 603 620 0.92
Sequence Information
- Coding Sequence
- ATGGGAAGTGGAAACGAAATTAACAATGGTGGAGGTAAAAGCGGCACAGGTGTTTACTCATCTGACGGCCACGGCTATTGCCTGCGATGGAACAATCACAAATCAAACCTCGTGGAAATCATCGAGTCGCTCATTAAGATGGAGTGCTATGTCGACTGCACAATCTACGTCGATAATCACGTTCAGTTTAAAGCGCATCGAGTTGTGCTTGCTTCATGTTCGCCattctttcaattgatcCTTCAAGATGCACCACAAGATCATTGCAGCATCATTTTCCCAGGAGTTCAAGAATTCGAGATGAGAACTCTGCTCGAATATATTTACGCGGGCGAAGTGAACATTGCTGAATCGCAAATCCCgagaattatgaaaattgcCAAAATGCTTGAGGTCAAAGGACTTCTTGACATGGTCGATCTCACCAGCAATATCAgccaacaacagcaacagccGATTATCAGTCCACCTAACAATAACATCTTTCGACCTTCGTCTAATCCAAGCGTTGCATCAGAAGGCAAACGTGATCAATCGACATATCTTCACCCGTTGACACACTCGTCACCTATCATAAGTACATCAACAAAGATCTCATCAGCTCAGAGTTCATCATCCCCACCGTACAATAAGACGCCTTACATCGCTAGCTTCTACCCACAAAATTCAACAAATGCTCGCGAGTTGATACCCGGTCAAGAGAATGCAgatgaaagaagaacttGGCCACCAATTCCTTTGTCTCTCTCGCGATCTGCTCAATCAATGCTCAGCTCAGTTTATGAATCAGGCTCTGATATGAATCCattgaaaaggaagaaactttcttcgatTAGCTCAATGTTAATGACCCGTGACACTCCAATTCTTCGTAACGTTCTTGCTCAAACGACCGCAGCTGACTCATCGCAAAGTGCATCGCCTATGAACGCTAATCCAAGCCCGCCTCGTGCCAGTGGAAACGGTAATGACAGCAACGATCATAACGACACcaacaacaatgaaaataataacaACGTTAATAACTTTGGTGCAGCAAACGCTGGAAATGCGAGCGCCGGAAACAATGGATCGGTTTATGTTGGCTTCGTGAGAAAGAGCAGTGGTGATCGCAGTTATCATTCATCCAACGGAAGCGACAACTCAGATAAGAAATTCAAAGACGAAGAACCATCATCGCCATACACAGACAGATCATTCGACGACGAGCCTATGACGGGCGAACGTAGGACATCGCCACCAGAGTTTCTTGCTGACATGAGAATTCCGCCATATTTGCAACAACATCAACTTCAGCAAGCTCAATATCATCAACACCATGGTCAAGGCAGTCAGGGTAGCGGTTCGGGTCAGAAACCGGAATGGAAGCGTTACAAGCAATACACAAGAAATGACATCATGTCTGCAATCGAGTGTGTTCGTAATGGAATGAGTGCGCTTCAGGCAAGTCGTAAGTTCGGTGTGCCATCGCGTACTTTATAtgataaagtgaaaaagttGGGAATTACCACGGGAACACCAAGAAATCGATCGTCATCGATtagaaaagagagagaaggagcTGGTCCGAGTTCAAGCAGCGCTGCTTTCCCTTACGGTTCATTAGGTGGAGCAGCTGGAGCTTTCGGTCTCTATCCGAATCAAGATAATCAGCTCTCGCAGTCACAAGACTTCGATCCGGAACtcgaagaaatgaaacatcATCATCGCGCTAATCCACACCCAGCGAGTCTTTTGGATCCGGTTTTCCTTCAGAAAGCGCTTGAGGCTCGTGGTGAAAACTTTAGCGGCGATGCACTTCACGCAATGGCTTTAGCTGCTGCTGCCCATGCAAAGTTTAATGGAATGAGTCAGAGAAGTCCCCCAGCGCACGGTTCGCAAAGTCCAAGCATGCTCACGCAATACATCAATCGAAACCTTGAAGCTGAGATGAAtcgtgagagagaaagaagtcGATCGAACGGTGAACACACGACGATCAAGCGTGAACCAGAAGAAAGCGAAGATGAAACCGAAATGTCTGAGAGAGCAGAAAACTTATCTTTATCGAAAAGAGAATCTCCGCCAGCGATGACTCCTCCGCCTCTTGTACACTCACCGCCATTCATAACGCCTATCGAACAGCCTCGTGGAGTTATCGTTCCTCCAATGAAATATACATCACCACGTTCTGAGCCATCGTCAACAACCCCACCAAACATTATGGATCAACCGCTCGCCTTAGACAAAAGCGAGTTCAAACAAAACCTCTCAGACCCATCGCCAATCGCTCTCACACCTACAACAACCGCCAACTATGACGAATAA
- Protein Sequence
- MGSGNEINNGGGKSGTGVYSSDGHGYCLRWNNHKSNLVEIIESLIKMECYVDCTIYVDNHVQFKAHRVVLASCSPFFQLILQDAPQDHCSIIFPGVQEFEMRTLLEYIYAGEVNIAESQIPRIMKIAKMLEVKGLLDMVDLTSNISQQQQQPIISPPNNNIFRPSSNPSVASEGKRDQSTYLHPLTHSSPIISTSTKISSAQSSSSPPYNKTPYIASFYPQNSTNARELIPGQENADERRTWPPIPLSLSRSAQSMLSSVYESGSDMNPLKRKKLSSISSMLMTRDTPILRNVLAQTTAADSSQSASPMNANPSPPRASGNGNDSNDHNDTNNNENNNNVNNFGAANAGNASAGNNGSVYVGFVRKSSGDRSYHSSNGSDNSDKKFKDEEPSSPYTDRSFDDEPMTGERRTSPPEFLADMRIPPYLQQHQLQQAQYHQHHGQGSQGSGSGQKPEWKRYKQYTRNDIMSAIECVRNGMSALQASRKFGVPSRTLYDKVKKLGITTGTPRNRSSSIRKEREGAGPSSSSAAFPYGSLGGAAGAFGLYPNQDNQLSQSQDFDPELEEMKHHHRANPHPASLLDPVFLQKALEARGENFSGDALHAMALAAAAHAKFNGMSQRSPPAHGSQSPSMLTQYINRNLEAEMNRERERSRSNGEHTTIKREPEESEDETEMSERAENLSLSKRESPPAMTPPPLVHSPPFITPIEQPRGVIVPPMKYTSPRSEPSSTTPPNIMDQPLALDKSEFKQNLSDPSPIALTPTTTANYDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01352866;
- 90% Identity
- iTF_01352866;
- 80% Identity
- iTF_01352866;