Sate002523.1
Basic Information
- Insect
- Smittia aterrima
- Gene Symbol
- ttk
- Assembly
- GCA_033063855.1
- Location
- CP093829.1:12782648-12785481[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-16 1.4e-13 50.3 0.0 2 45 493 537 492 537 0.95
Sequence Information
- Coding Sequence
- ATGACTACGGTTCAGCAATACTGTTTAAGATGGAACAACCATCAGCCAAACTTCATATCCGTGTTTTCATCTTTACTTCTTAATGAGACGTTAGTAGACGTAACACTCGCTGCTGAGGGACGTCAATTACAAGCGCATAAAGTCGTTTTATCAGCATGCAGTTCATATTTTCAGTCACTGTTTACAACGAACCCTTGCAAGCATCCAATCGTCATACTTAAGGATGTGCAATACAACGACCTTAAAACTATGGTAGACTTCATGTATTATGGTGAAGTGAATGTCTCCACTGAACAGCTTCCGCAGATCCTAAAGACTGCTGAGATGCTAAAGATAAAAGGCCTCGCTGAGATGCCTGACGCTGCATCAGTCACTAAGTCTGATAGCAAGTCAAGCGATCATACAGAAGGCAATCAATCAATTAGCGGTGTTGAGTCAATGTGGGGCAGCACAGAGtctcaacaacaacagatGCAACAATCGCAACAATATCATCAGATTCGTCGCACACCTTCGCCATCCTGCATGTCACCAGCAACACGACGAAAACGTTTGAGAAAGACTTCTACAGGCTCGGgatcagcaaatatttcaacttcgACCGAACGCATTCATGATGATGGGCAACTACAGCATCaccagcagcaacaacaaatcaTTGATGGTAGGATGATGCAGAAATATTCGCAACTCCAGGCATCAGTTGATGTCCCATTGTCATCATTTTCAGTGACGCCTAACGTCCGAGGTATGAAAATCAACTCTAGTCCCGATGGTCAAATGCAACATCACCAACAAGATTCGCACGAGCATCACATCGACGAGTCGCAACATATAACTGAAATGAAAACGGAAGATTTAGGCGGCTGCGTCAATCAATCAATGCCATTGGATATTTCATCGGGAACTTCGTCGACGCCTGTTAGCTGTCCCCCAACACACCAGCAACAACATAGTGGTGGGCAGTGGGCTGTTATCGATAACAATTATCCACGGTTCGCTCTGACAACCTCGGCCGCGGCTCTGCCGACAAGTACAGTTCAGCATAGTAGCAGCATTCATCACTCGCATCAccaccatcatcatcatcccGACGGACAACAGGGCAGTGATAATCTATCTCTTGGTTCAAATCATAGTTCAAGCCACGGAAGTTCGAGCAATTCAAACTCTAATAATAACACTTCTATCCAATCGCAAACGCCCGTTCAACTTCAATACCAAACCACGTACTCGCCTCAGATCATTGCCGTAAATCCAAACAACATTGTAAACAGCTATCCTCCGAGCATATCTACACCGACGAGTCCTATCGTGCAATCTGTTTACAGTCAGCAAAGTACGCCAATTCAATCCCCAGTAAACATTCAGAATTCAAACAGTGATGCTGGAACAAGCTCTACAAACAGTGCAAACGCGACTCCAGTAGCAACTCCAGCTCCGCCTAAAAGAAAACGATCAGTAAACCCACAAGGCGAAGAGAACTTCCTTCGAGCGCTAGACGCTGTAAGATTCGGTGGAATTGGGTTCTGTAAAGCGGCTCGACTTTACGGAGTCAACAACAGAACACTATGGTTAGAATTTAAGAAACGTGGTTATCCTATCAGTCGACCGAGCATCAAAAGTCGAATTAAGACAGAACCAAACATGAGTCCACCACCTGCCCCTTCAACACCTTCTGCTGAAGAGAATACGATGGAGAACTATGAATCAAACATACAACAACCGATGGCAGGTCCGTCGTCAAGTGAGACTTCATCGACACCAATCATGTGTCCGCCTCATCATCCAATGGGCGTTATGGGCTTCCTTGATACTCGACATGTCGATTTTTCTACTGCGGGGCTTCATCAAATGTCACGACCACGTTATCCAGATGGAACGACAGTTAATATGAACCCAGGATCAGTAAACATCCAGggaattaattttaactCCATGTAG
- Protein Sequence
- MTTVQQYCLRWNNHQPNFISVFSSLLLNETLVDVTLAAEGRQLQAHKVVLSACSSYFQSLFTTNPCKHPIVILKDVQYNDLKTMVDFMYYGEVNVSTEQLPQILKTAEMLKIKGLAEMPDAASVTKSDSKSSDHTEGNQSISGVESMWGSTESQQQQMQQSQQYHQIRRTPSPSCMSPATRRKRLRKTSTGSGSANISTSTERIHDDGQLQHHQQQQQIIDGRMMQKYSQLQASVDVPLSSFSVTPNVRGMKINSSPDGQMQHHQQDSHEHHIDESQHITEMKTEDLGGCVNQSMPLDISSGTSSTPVSCPPTHQQQHSGGQWAVIDNNYPRFALTTSAAALPTSTVQHSSSIHHSHHHHHHHPDGQQGSDNLSLGSNHSSSHGSSSNSNSNNNTSIQSQTPVQLQYQTTYSPQIIAVNPNNIVNSYPPSISTPTSPIVQSVYSQQSTPIQSPVNIQNSNSDAGTSSTNSANATPVATPAPPKRKRSVNPQGEENFLRALDAVRFGGIGFCKAARLYGVNNRTLWLEFKKRGYPISRPSIKSRIKTEPNMSPPPAPSTPSAEENTMENYESNIQQPMAGPSSSETSSTPIMCPPHHPMGVMGFLDTRHVDFSTAGLHQMSRPRYPDGTTVNMNPGSVNIQGINFNSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01257209;
- 90% Identity
- iTF_01352749; iTF_00199168; iTF_00199018;
- 80% Identity
- iTF_01352749;