Sate001563.1
Basic Information
- Insect
- Smittia aterrima
- Gene Symbol
- JARID2
- Assembly
- GCA_033063855.1
- Location
- CP093829.1:7641139-7646756[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-21 2e-18 66.5 0.0 7 89 1210 1290 1205 1290 0.92
Sequence Information
- Coding Sequence
- ATGGTCGTTTCAAAGCGGAAAAAGGATAATAAGGAGACCGCTCCACCGACCCCAGAATTGAAAAGAACTAAAATTCAAGCTCAGCGTAAGTTTGCACAAGGCCAGCAGCCGCCTTCTTCAGTCTATTTGAATCTCACATCTGGAACCGAGACGCctgtgaaagaaaagtccCAAGAAAGAGAATTGCTGCCGAATTTGCGACCCAATACGGAAGACTTCTTGACGTTCTTATGTTTTCGTGGCACAAATTCGTTACCAAAAGAGCTCGATTTCCAGAACACCAACAATCAGCCGTCTACAAGTGGAACAGGAAGTAAAGCTACCAAGTCATCACcagagaaaaaagtgaaagacaaagttgaagtgaaaaagaaagccggaacaaaaaagaatgaaactgTTACATCTGAGAAAGAATTAGACGTCGCAAAGTCTAAGTCGTTACTTCCAGAGAAGGATCCAAAAACTGGTTTCATGCCTTTCGCTGTGAGGAAACGAGCAGAAATTCATCCGGCAAAGAacgataagaagaaaatacaAACTGtaacaaagaaaaagcaaCAGTCGAAAACAGATGCAAAGCTTAATGATAGTGAAACGTCAAATGGACCAAGAACAACCAGAGCTAATCCGATTGAGGAGAAAACTCCAACTGAAAGTCGAAGTAGTAACAGTAAAGTTAATAAGAGAAAAACACCTTCCGAATCTCCAGCACCAACAACAGAAGTTTCATCGAcgagtgaaaagaaatcgaataaaGTTGGTCCTAACAAGAAAGTGTCGAAGCTTGAAGATGATAAACGAAGAACTCGTTTGTCAGCAATCAAAACTCCTGAATCTTCAACTCCAAAAGAGAAATTGGGAAATGGAACGAAGTCTCCAAGctttgataaatatttctcatcatcGGATGGCGACGATGAACCGTTAGTGAAGGCTGAGCCGAAAAATAAGAAACCAAAACTTAATGACACGACTGCAAAGTCAACAGCGAATAATTCCGAGATCTTTTCTGCGAGCAAAAGTTCATTACTTAATTCCACAAACGACTCACCTCTTCCGGTTAAGTCAAATCGaggacgaaagaaaaagattcttgtGCAATCAGAACCAGAGAAGGTGCCAGTTGAAAAAGATGGAGGAGACACATCTCtggagaaaaagaaagttggtcgaaagaagaaaatgaacgTTGATCAGGAAATTGCCAACTCTCAGACTGACTTGAGTGAAAATGAAGCTCGAGGAAGGCCGAtgaggaaaacaaaagaagcgGCAACGATTTACATGGAATTGATTGGTCGAAAGTTAACTCTTCATGATTCTTCAGATAACGATTCATCACTTGATAGTCTCGAAGCTCCGAATCTCAAAAGAGTGACGCTGTTGGAGAATGAGCTTAAAGCAAACTGTGAAAAAGCTAAGGAGGTTGAGGCTGAGAAGATAAAACAAGGGAATAAAGAAATAAATCCAACCGAAGGCTCAGCTTCAAAAAACTTGATAGGAAAGCGCGGCGTCAtagaaaaagatgaaaaaataattgagagTGAAAGTGATTCAGATGAAAAGGCTAAGCAActagaaaaaagttttagtgaTTCAGATGAAGAGCCCTTAGCTACAAAGGTCACAAAGCAACCAGTGAAACCAGCTCCCAAGAAAAGAGGAAGGAAAAGTAATGTAGAGTTGGCAGAGATTGCGCGTCAACtcgaggagaagaagaaagccGAAGAAGcagaacaaaagaaagtcGTTGGCGATcaaaaaaagtcttcaaaCACTTCGAAACAATCGCCATCGGTAACGCAAAAGACAGTGCAGAAGGATTCGACGACAAAAACCTTGGCAAGCACtgcaaaagctttaacaGACGTCGCTCAAAACCGCACAGGTCCAAAAAAGGAAGTTTCTCAAACAGACGACGATGAATTTGTGAAAGGATTCGACGCTGGAATGTCGAAGCCTGTTTCATCAGCTAAACcttcaatcaatttgcttCCGAGCAAAGAAGAATCTGAAAAGATCTTTGGCATCGCGAGTGTTACCTTGGCTCAAAGTTGTGGCCCATTAGACACAAAGTGCACGCTAGGAAAATGTGGATCTGTTCACGTTCACAAACCGCCTTTGAACTCTCCAACTGTGTTGACAGAATCAGCTCTCGGAGCAAGTCTTTCGCCCAAAGATCGTCGAAAGAGTAAAGTTAACATGACGAGAGAACAGATTCAAAAGTGGCTTGAAGAAGCGTCGTGGACTCCGATTCCTGACAATGAAACTGAAACACTTGACTTAAAGATAACGTCAAAGGCTTCAACTTCAAGCGTTGGCCTTTCCAAGTCAGGAGACGATTCGCAATCGTCAAGCTTTAttagagaaaaattgatcgAACAACCTTCACCTTCGGCTAGTGGCAAAGAAATGACACTCAAGGCTAAACCAATTAAATCAGAATCTCCAATAACTACAAAGCTCCTAGCTAAAGTCGATGATAAAATCAAGTTCAACTTCCCActgaaaaatgaagaacCCACAAAGAAAGTTAATCCAAACGACCAAAAAACGAATGGATCCAAACCAACAACGCCAACAGCGAAACCAACTGCGAGTAGTAGTAGCAGCGTggctgaaaagaaaactccagtttatcaacagcagcaacagcgTCGAACTCCTGTTTACAAAACTGATAATAAACCCAATTCAAAGTTAACTCCGATGTTGCCAAAAAGCTTCGGTGCCTTTTCGCCAGAGAACGAACACAGCATTTACTCCTTCGACAAGGAAGATGAAGACGTTCCAATTCCTACGACGCCATTTCGAAGAAGCAATTCGAAGACGGAAAGCGAAATCTTCCCGAAACCTGCGGTGACACCAAGCAAACAGTCAACGCAACCTTCGCACGTTTCTCTTACTTTGAGTCCTGAAGATAACAAGAAGTCAGCTTCAATTAGTGTTGAAATAAACGATGAATCGAGAAAGGAGCTTCTGAGTTTGGATGCTAGTAGAGACAAGGATGGAGATAACGATTCAGACTCGGAAGGTGACACGTTTTATATTCCTCTGCAAGCGTCGAATGTTTCGGGAAGCAAGACGATACAAGGCGTTGCTGTCAAGCTAGGAACAGAAGGAGCTGAAGGTCCCAACCAGAGAATTATTATGCATGCAAAGCTGGTGACAAAACCTCGAGCAAACGCAGCTCCATTACCAGAGTCAATGACAAACGTTCAAGAACTTGTTAAAAGTTTGATGGCGAGTAAGGAAACGAGTAAGGCTGTGCCCTGTGCAACTGTTCAACCAAGATTCAAGTCGAATGACGGAGCTGTCGAAAAACCCTTGCAACCAGAAGCGAGCACTTCAATGTCATCgggaaatcaaagaaattctcaaGCAGTAAAGATTGGAACATTAACAGAAGCTCCGATCTTCCGACCAACAGAGAAAGAATTCCAAGATCCAATCGAATACATTGAACGAATCACTCCGATTGCTTCGCGTTTCGGAATCTGTCGAATTATTCCAccagaaagtttcaaaccCGAATGCAGAGTCAGTGACGAAATGAGATTCACCGCTTACAATCAGTATGTTCACAAGATGCTTCATCGTTGGGGTCCAAgctcaaaagaattttcagcAATCAAAAAGTATTTGGCAACGCAGAGCATTGTGTTTCAACGTCCTCCGTTGATTGCTGGCATTGAAGTTGATTTACCGCGTTTGTATCACACAGTTCAAGAGCTTGGCGGTTTGAAGGAAGTtatcgagaagaagaaatgggCGAAGGTCGCTGAAGATATGTGCATTCCGAAGACAGCTCACGACCGTGTCACAAAGCTTGATGATATTTactgcaaatatttgttacCTTACGATACGCTTTCGCATAGCGAGCGACAAAAACTCTTCGACGAAGTTGAAGCTGATTGGGCTAAACGTGAAACAAAAGCTCGAAGAACTGCCGACAAAGGAGTTGAATCTGACGAGCAAAGTAACGAAGAGTCAGAGGATAGTGATGAAGAGGAGGAAGAAGATGATAACGCTTCGATGGAATGCATGGTCAAAGGCAGAAGCATGGCATTGAGTCAATTCTATCGAATTGCTCGTAACATGGTTACTTTGTGGTTTAAAACTCCCGAGCCGACTGTCGCTGAAATCGAACAAGAGTATTGGCGACACGTCGCTGTTCGTGATAGTCACGTTTGCGTGCATTACGGATCAATTGATTCAAGTGGCTACGGATATGGCTTTCCAATGCCTGGACCGAAGACAAAGCTTTCACCTTGCTCGAAGCATCCGTGGAATTTAAAAGTATTGACAAACAACTGCAGCTCAATTCTTAGATCATTAGGACCTGTGATGGGAGTGACAGTACCGACACTTCACGTTGGTATGCTCTTCAGTGCTGTTTGCTGGTATCGCGATCCACATGGACTTCCATGGATTGAGTATTTGCATACAGGCGCAAGTAAGATTTGGTACGCTGTACCTGATGAGCAGAGTTCTAACTTTAGAACGGCATTGACTTCGCTGGTTCCTTCACAttgtcaaaacaaaacaatttggCTGCCTTGTGATACTGCAATGgTTCCACCTTACATGTTAACAGACAGAAACGTCAACTTGTGTCGAACTGAGCAGCAACCGGGACAATACGTCGTCGTTTTCCCAAGAGCTTATACATCAAGCGTTTGTACTGGTTACACAGTTTCTGAGAGCGTTTATTTCGCAACAAACAGCTGGCTTGATACAGCTCATCTTGATTTCAAAgATATTCAAGAAAGTTGTGAACCGACAATGTTTTCATTGGAacaacttttgtttgctaTAGCTAACGATCAACGTAGCAAAGACGAAACTGTAACGAAAATCCTACCGATGCTCTTGGAAGTATTTGAAGCCGAAAGAACTGATCGGCAAGCTTTAAAAgATGCTGGAGTAACAGCAAGTGAGAAGATTCACGAAACGAGAAACAAAGTCAACGCAGAGGAACTCGAATGCAATTACTGTCGCGCGAACTTACATATCTCCTGGATCAAGCTCGtcgatgacgatgatgagaATGTTTACTGCTTGAAGCACTCGTTGAAATATCTCAACGACAACCGAATTCAGGCGAAAACTTGCAAAATCATGTTCACCTACACAATTGATGAGATCGAAAAGCTCATCAAGAAGCTGAGGGTGAAAGTAGCAGCGGAAGACAGCGAAGCTCATTCGTCGTCTTTCGGGGAAAATTCTAAATCGAAAAACAAGGGAAAATTGGCTTTAAAAGGTCaaagcaaatattga
- Protein Sequence
- MVVSKRKKDNKETAPPTPELKRTKIQAQRKFAQGQQPPSSVYLNLTSGTETPVKEKSQERELLPNLRPNTEDFLTFLCFRGTNSLPKELDFQNTNNQPSTSGTGSKATKSSPEKKVKDKVEVKKKAGTKKNETVTSEKELDVAKSKSLLPEKDPKTGFMPFAVRKRAEIHPAKNDKKKIQTVTKKKQQSKTDAKLNDSETSNGPRTTRANPIEEKTPTESRSSNSKVNKRKTPSESPAPTTEVSSTSEKKSNKVGPNKKVSKLEDDKRRTRLSAIKTPESSTPKEKLGNGTKSPSFDKYFSSSDGDDEPLVKAEPKNKKPKLNDTTAKSTANNSEIFSASKSSLLNSTNDSPLPVKSNRGRKKKILVQSEPEKVPVEKDGGDTSLEKKKVGRKKKMNVDQEIANSQTDLSENEARGRPMRKTKEAATIYMELIGRKLTLHDSSDNDSSLDSLEAPNLKRVTLLENELKANCEKAKEVEAEKIKQGNKEINPTEGSASKNLIGKRGVIEKDEKIIESESDSDEKAKQLEKSFSDSDEEPLATKVTKQPVKPAPKKRGRKSNVELAEIARQLEEKKKAEEAEQKKVVGDQKKSSNTSKQSPSVTQKTVQKDSTTKTLASTAKALTDVAQNRTGPKKEVSQTDDDEFVKGFDAGMSKPVSSAKPSINLLPSKEESEKIFGIASVTLAQSCGPLDTKCTLGKCGSVHVHKPPLNSPTVLTESALGASLSPKDRRKSKVNMTREQIQKWLEEASWTPIPDNETETLDLKITSKASTSSVGLSKSGDDSQSSSFIREKLIEQPSPSASGKEMTLKAKPIKSESPITTKLLAKVDDKIKFNFPLKNEEPTKKVNPNDQKTNGSKPTTPTAKPTASSSSSVAEKKTPVYQQQQQRRTPVYKTDNKPNSKLTPMLPKSFGAFSPENEHSIYSFDKEDEDVPIPTTPFRRSNSKTESEIFPKPAVTPSKQSTQPSHVSLTLSPEDNKKSASISVEINDESRKELLSLDASRDKDGDNDSDSEGDTFYIPLQASNVSGSKTIQGVAVKLGTEGAEGPNQRIIMHAKLVTKPRANAAPLPESMTNVQELVKSLMASKETSKAVPCATVQPRFKSNDGAVEKPLQPEASTSMSSGNQRNSQAVKIGTLTEAPIFRPTEKEFQDPIEYIERITPIASRFGICRIIPPESFKPECRVSDEMRFTAYNQYVHKMLHRWGPSSKEFSAIKKYLATQSIVFQRPPLIAGIEVDLPRLYHTVQELGGLKEVIEKKKWAKVAEDMCIPKTAHDRVTKLDDIYCKYLLPYDTLSHSERQKLFDEVEADWAKRETKARRTADKGVESDEQSNEESEDSDEEEEEDDNASMECMVKGRSMALSQFYRIARNMVTLWFKTPEPTVAEIEQEYWRHVAVRDSHVCVHYGSIDSSGYGYGFPMPGPKTKLSPCSKHPWNLKVLTNNCSSILRSLGPVMGVTVPTLHVGMLFSAVCWYRDPHGLPWIEYLHTGASKIWYAVPDEQSSNFRTALTSLVPSHCQNKTIWLPCDTAMVPPYMLTDRNVNLCRTEQQPGQYVVVFPRAYTSSVCTGYTVSESVYFATNSWLDTAHLDFKDIQESCEPTMFSLEQLLFAIANDQRSKDETVTKILPMLLEVFEAERTDRQALKDAGVTASEKIHETRNKVNAEELECNYCRANLHISWIKLVDDDDENVYCLKHSLKYLNDNRIQAKTCKIMFTYTIDEIEKLIKKLRVKVAAEDSEAHSSSFGENSKSKNKGKLALKGQSKY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -