Sory002449.1
Basic Information
- Insect
- Sitophilus oryzae
- Gene Symbol
- gata5-b
- Assembly
- GCA_002938485.2
- Location
- NW:2449633-2569275[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-17 2.6e-14 52.2 2.7 1 35 359 392 359 393 0.97
Sequence Information
- Coding Sequence
- ATGACTACGACCAAGTCCGATTATCAGCAGCGTCACTACGGAGTGCAACAGCAGTACGGCGATGAGCAGCAGCAGGCCGGCGGCGCCCAATACAGTCCCGCCTCGCAGCACGAGGGGGCGGACCTGTCGCCCCACTCGCGATCGACCACGCCCCTCGAATTTACCGGCGCCACTGTCGTCTACCCCGCCGGCGCCGCCACTGAACAACAGGCCCACCAGGATCATCACCAACAGCAGCAGCAGGACAATTACCACACGCTGATACGGGCGGACAACGGAACGTACTTCAGATTGGACGAGGTCCCTATAGACGCCACTGGTGCCTTCCTCCACCTGAGCCAAGCCACGCCGAACTCCAATGGAAACTCACCCTACAACAGCGAATCTCCAAGTCCAACATCTCCCAATCGGACAACTGGATATACGAATTTGGGAATAGCTGTGGCGCCCTCCAGTGATGACCAGCAACAACACACGATAATAGAAGCAAGCACGGCACAGTTAACTCAGCTAACTAGCCATATTAGCTATACGGGTGAACTGGATTCGTCGGGAGTACCCAACACGATAAGCAGTTCGATTTATTCAAGAAACACCCCTCACTACAACAATACAATGCATTACTATAATACAGGGTCTCCGGATTTACACACACAGAATCAGATGTGGCAAAATGCAGGTGTTGCTCTTGGAACCACTCTTCCTGGTGAAGACTACCAGAAAACAGCAACTTCTGCGGCAAATGCCCTTCCAGCTTTCAACCGACTTCCTACGTTCCAGACTGCTCCTAGAAGTACTACATCATACCCAACGGCAACGGCGTACACGGAATATGCTGCTTATCCAGACCAGACTGGCGCTTACAACATCACATCTCCCACCTCGTCAAGGAATAGAATGAGTGCAGCCAGCACATTATCAGCAATGGCGGCCGAGCCTGGTACTGGGGGTGTTCCAGAATACTACAAGAGCTACTACGGCGGCTACAACGGGGCCGCTAGAGCCCCATTGCCTCTGCCCACCGAGGAGAAAAGCAGTCGACGACTGTCTGCATCACGGCGAGCTGGTCTTACCTGTAGCAACTGTCACACAGTCACAACTTCTTTGTGGAGAAGAAACACTATAGGTGAGCCTGTGTGCAATGCGTGCGGCCTCTACTTCAAACTACATTCTGTCAACAGGCCTTTGTCGATGAAGAAGGATACTATACAGacGAGAAAGAGAAAGCCCAAGGGTAGTAAGTCGGGTCAATCAAACAACGGCGGTCAAATAGCTCAGAGACATGGAATTAATAACAATAGGATTAAGGTGGAGAAAATAGTCAAAATTGAATCATCATTGGaTCAATTTGGTCTTACGCACTTACAACAAACCACACCCACAAACTTCCTCTACAACCAGGGATACCAACGACTCAGTCCCACCTATTCATCACAATCCCCACAAAATCTAACGCAAGCAGACTACAGCGTCCTACATCACAATACAAGTCCCAGTCCACAATCGAATACGTCAGACTTGCACTCCGAGTCGCCTCATTCGCCACTTATTTTgcacaacaacaataacaacaaCAATGGTAAAGTTTTAATTAATGGAGAGCACACGTATGAAAGACCGACGGTTGTGTCTATATCGTCCTAG
- Protein Sequence
- MTTTKSDYQQRHYGVQQQYGDEQQQAGGAQYSPASQHEGADLSPHSRSTTPLEFTGATVVYPAGAATEQQAHQDHHQQQQQDNYHTLIRADNGTYFRLDEVPIDATGAFLHLSQATPNSNGNSPYNSESPSPTSPNRTTGYTNLGIAVAPSSDDQQQHTIIEASTAQLTQLTSHISYTGELDSSGVPNTISSSIYSRNTPHYNNTMHYYNTGSPDLHTQNQMWQNAGVALGTTLPGEDYQKTATSAANALPAFNRLPTFQTAPRSTTSYPTATAYTEYAAYPDQTGAYNITSPTSSRNRMSAASTLSAMAAEPGTGGVPEYYKSYYGGYNGAARAPLPLPTEEKSSRRLSASRRAGLTCSNCHTVTTSLWRRNTIGEPVCNACGLYFKLHSVNRPLSMKKDTIQTRKRKPKGSKSGQSNNGGQIAQRHGINNNRIKVEKIVKIESSLDQFGLTHLQQTTPTNFLYNQGYQRLSPTYSSQSPQNLTQADYSVLHHNTSPSPQSNTSDLHSESPHSPLILHNNNNNNNGKVLINGEHTYERPTVVSISS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -