Sory002385.1
Basic Information
- Insect
- Sitophilus oryzae
- Gene Symbol
- gata4
- Assembly
- GCA_002938485.2
- Location
- NW:2588319-2629496[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-17 2.5e-14 52.3 2.3 1 35 428 461 428 462 0.97 2 2 1.9e-17 3.8e-14 51.7 5.1 1 35 484 517 484 518 0.97
Sequence Information
- Coding Sequence
- atgaaaaaatggcGTAAAGAATCGGTAATTCATTAttcatttatgtcatatttgTTCAAAAGGTGCGCAATCTCCACTTTACGTGGATGCGTGTTTTTTGGGTACGGTATGCTTACATCAGTACATATCGCTATAAACGGTTGTACTGTGCTGTTCCGCTGTAAGATTATATCTCACGCCGATTTTACCTGTAATTCTGATACATCTTCAATTAAAAAGGACATGGAGCCTAAAAAGGAACCGGACCAATCACCAAAAAACAACCAACCCAGCGAGGCTGAATTACAATCCCCAGACCAAATAAAATCGGAGGAAGGCATAGAGCAGCAAACCCAAATCTTCATCAGCCAACCAAATCAACCCGACCAACTGCTACAAGCACGCGAAATGCCCCCTTCAGTTATCAGAAGAAACATCATCACACCCGCTGGCATAATCGTGGCTACTGACCAACAAGTCGAAGTACAATCCGAAGAAGTTGTTGATGAAACCTCTGGCACATCTCAAGAAATGAGTCCGGAAAATGAAAAGAGCAGTACCACAGTCTCGTATGCTACCATAGTTCAGGAAACGACAGGTACGAATGACAGTTTCGGAGAAGAAAAACAGTTCATAGTTACAACGGAAGCGTCTTCCGATACATTCCAAGCACAGGCAAATTCTTTTCCTCCTGATCAGCTGgttaattttacaataactcAGGACGGAGAACATGAAATACCGATAGAGAACGCTTCGATTGAAGCTCAAGGAAACTACACGAATTTAGAGACTGCCCAGTTTCAAGGTAATGGACAGTATCCTACGGATGGGTCACACTACTTACAGCAACATCATCAGTATGGGGGAATTCCGTTTTCTGTTGAAAAGAGTAACGGAGGAAGCCCACCAGCCAACAATTTGCTTTATAGAAACAACGATCCGACGTTAGCATCATCTAGATATGCGGAGATCCGTACCACTCCCAACTTCGAGCAACGAATGAACCAAATCACCACGTTCACCTCACCATCGTCCGGTCAAAGCTACCAAATCACAGCCCCGTCGACCGAATCGTGGCAAACGGCCACCACCCAGTACAACCAAGGCTACCAGAGCCCGGTAGCCGCGGGAGTAAACCTAGTACCGCAAGCAGACAGCACGGGCGGCCCATCCCAGCAGTACTACATCACCACCCAGTGGCCTGCCCCGGGAAACAATATGGAAGATGGTGGTGCTAGCGTGGGCACTTCTGGCGGCCAACACCAGCAGCGATCTGGCACAGAGGTACTTGTCAAAGAATGCGTCAATTGCGGTGCTAGCGTCACGCCTCTGTGGCGTCGCGATGGTACCGGCCATTACCTGTGCAACGCGTGCGGCCTCTATAACAAAATTAATGGTGTGAATAGACCGCCGATTAGGCCGACCAAAAAGCCACAGGCGACTGGCAACAGAAGAACAGGAGTTTCATGTGCGAACTGTAAAACAGTGAACACGACACTTTGGAGAAGAAATAATCAAGGTGAACCCGTATGCAATGCTTGCGGACTATACTTCAAGTTACACAACGTGAACAGACCAATTAGCATGAAGAAAGAGGGGATCCAAACGAGAAAAAGGAGGCCAAAAAATTCCAACAGCAATCAGCAACATCCCAACAGTCCAACCACATCCGGCATGCACCAACAAAGAATGAATGCCACCCCTTTGTACTATCAAAATATTCCCCAAGAGATTGAGTTACCTAGTGACCAGTATCAGCTACCCCAAAATGTGGTAGTCAGCAATCTCTATCCAACACAGTACCATAGAAATCAACTTCAAAGCGTTGAACATTTGACACGTCAAATGCCCAAGTAA
- Protein Sequence
- MKKWRKESVIHYSFMSYLFKRCAISTLRGCVFFGYGMLTSVHIAINGCTVLFRCKIISHADFTCNSDTSSIKKDMEPKKEPDQSPKNNQPSEAELQSPDQIKSEEGIEQQTQIFISQPNQPDQLLQAREMPPSVIRRNIITPAGIIVATDQQVEVQSEEVVDETSGTSQEMSPENEKSSTTVSYATIVQETTGTNDSFGEEKQFIVTTEASSDTFQAQANSFPPDQLVNFTITQDGEHEIPIENASIEAQGNYTNLETAQFQGNGQYPTDGSHYLQQHHQYGGIPFSVEKSNGGSPPANNLLYRNNDPTLASSRYAEIRTTPNFEQRMNQITTFTSPSSGQSYQITAPSTESWQTATTQYNQGYQSPVAAGVNLVPQADSTGGPSQQYYITTQWPAPGNNMEDGGASVGTSGGQHQQRSGTEVLVKECVNCGASVTPLWRRDGTGHYLCNACGLYNKINGVNRPPIRPTKKPQATGNRRTGVSCANCKTVNTTLWRRNNQGEPVCNACGLYFKLHNVNRPISMKKEGIQTRKRRPKNSNSNQQHPNSPTTSGMHQQRMNATPLYYQNIPQEIELPSDQYQLPQNVVVSNLYPTQYHRNQLQSVEHLTRQMPK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -