Basic Information

Insect: Sitophilus oryzae
Gene Symbol: ZFX_1
Assembly: GCA_002938485.2
Location: NW:183736-196894[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 6.1 3.2e+02 1.8 2.2 1 23 135 157 135 157 0.93

2 26 0.012 0.63 10.3 0.6 1 23 163 186 163 186 0.96

3 26 0.00021 0.011 15.9 0.1 2 23 192 213 191 213 0.96

4 26 0.0016 0.083 13.1 0.1 2 23 220 241 219 241 0.96

5 26 0.049 2.6 8.4 0.2 2 23 255 276 254 276 0.96

6 26 0.00019 0.01 16.0 5.1 1 23 301 323 301 323 0.98

7 26 5.2e-05 0.0027 17.8 0.1 1 23 329 351 329 351 0.97

8 26 1.4e-05 0.00075 19.5 0.4 1 23 357 380 357 380 0.96

9 26 0.092 4.8 7.5 1.5 1 23 390 413 390 413 0.97

10 26 5.6e-06 0.00029 20.8 1.7 1 23 497 519 497 519 0.98

11 26 0.00011 0.006 16.7 5.2 1 23 525 547 525 547 0.99

12 26 0.0004 0.021 15.0 3.0 2 23 553 574 552 574 0.96

13 26 0.00066 0.035 14.3 2.1 1 23 583 605 583 605 0.97

14 26 0.0011 0.056 13.6 4.6 1 23 654 676 654 676 0.96

15 26 0.00023 0.012 15.7 0.9 1 23 682 704 682 704 0.97

16 26 1.3e-05 0.00066 19.7 2.0 1 23 710 732 710 732 0.96

17 26 0.0028 0.15 12.3 3.0 1 23 738 761 738 761 0.95

18 26 0.93 49 4.4 1.2 3 20 913 930 912 932 0.89

19 26 0.034 1.8 8.9 0.6 2 23 963 985 963 985 0.91

20 26 1.3e-05 0.00067 19.7 1.5 2 23 992 1013 991 1013 0.97

21 26 3.2e-05 0.0017 18.4 3.2 1 23 1019 1041 1019 1041 0.99

22 26 0.00052 0.027 14.6 0.1 2 23 1050 1071 1049 1071 0.96

23 26 0.076 3.9 7.8 0.5 1 22 1077 1098 1077 1100 0.79

24 26 0.015 0.79 10.0 1.3 2 23 1218 1240 1217 1240 0.95

25 26 0.0017 0.086 13.0 0.1 1 23 1246 1269 1246 1269 0.93

26 26 0.00037 0.019 15.1 0.7 1 23 1275 1298 1275 1298 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	6.1	3.2e+02	1.8	2.2	1	23	135	157	135	157	0.93
2	26	0.012	0.63	10.3	0.6	1	23	163	186	163	186	0.96
3	26	0.00021	0.011	15.9	0.1	2	23	192	213	191	213	0.96
4	26	0.0016	0.083	13.1	0.1	2	23	220	241	219	241	0.96
5	26	0.049	2.6	8.4	0.2	2	23	255	276	254	276	0.96
6	26	0.00019	0.01	16.0	5.1	1	23	301	323	301	323	0.98
7	26	5.2e-05	0.0027	17.8	0.1	1	23	329	351	329	351	0.97
8	26	1.4e-05	0.00075	19.5	0.4	1	23	357	380	357	380	0.96
9	26	0.092	4.8	7.5	1.5	1	23	390	413	390	413	0.97
10	26	5.6e-06	0.00029	20.8	1.7	1	23	497	519	497	519	0.98
11	26	0.00011	0.006	16.7	5.2	1	23	525	547	525	547	0.99
12	26	0.0004	0.021	15.0	3.0	2	23	553	574	552	574	0.96
13	26	0.00066	0.035	14.3	2.1	1	23	583	605	583	605	0.97
14	26	0.0011	0.056	13.6	4.6	1	23	654	676	654	676	0.96
15	26	0.00023	0.012	15.7	0.9	1	23	682	704	682	704	0.97
16	26	1.3e-05	0.00066	19.7	2.0	1	23	710	732	710	732	0.96
17	26	0.0028	0.15	12.3	3.0	1	23	738	761	738	761	0.95
18	26	0.93	49	4.4	1.2	3	20	913	930	912	932	0.89
19	26	0.034	1.8	8.9	0.6	2	23	963	985	963	985	0.91
20	26	1.3e-05	0.00067	19.7	1.5	2	23	992	1013	991	1013	0.97
21	26	3.2e-05	0.0017	18.4	3.2	1	23	1019	1041	1019	1041	0.99
22	26	0.00052	0.027	14.6	0.1	2	23	1050	1071	1049	1071	0.96
23	26	0.076	3.9	7.8	0.5	1	22	1077	1098	1077	1100	0.79
24	26	0.015	0.79	10.0	1.3	2	23	1218	1240	1217	1240	0.95
25	26	0.0017	0.086	13.0	0.1	1	23	1246	1269	1246	1269	0.93
26	26	0.00037	0.019	15.1	0.7	1	23	1275	1298	1275	1298	0.98

Sequence Information

Coding Sequence: ATGATAACAGCGGGCTTGGATAGCttgcatatttttttagataataacaGAGATAATAATGGTACGAGAAATAATGCTCAAAATGCATCTGTAGATAATCAATTGATAGCACAGAATTGCTTTATTAGACAACTGGAGGATGGCAATTATGAATTAGTTTTTTACAATACACAGGACTCCCAAAATGGTAATGAATGTGTTGGAATTGATGAGTTAAATAAAGATGTAAGCTGTGAGAAATTAGTTGAAAAAACAAATGACAAAGTAGGGCCAAAAGGAGTTAAAGTTTCTGTAATTCAAACTAACAAAATTGAAACAAAACCTACGGAACATGTAAAAACACCAACTAACAAATTACTGGGTTCtataaaactagaaaaacctTCTATTAACACCACTATCTATTCATGTATTAAATGCAAAGACCAATTTAATAGTCTGACTTTATTTCGTACCCACTTGAAATTGCATAAGACAGAGAAAAAGTTCAGCTGCACAAAATGTCTCACAGGGTTTAATATAgagaataatttaaaagttcACATGACTATTTACCATACTGGACACACAGATGTATGTCCTATTTGTAAAATTAAGTTTCAGAGGAAAGCTAGTTTGAAATCACATGTTATAGTGCATCAAGTTGAAGAGTTGATGTCCTGTGATGAATGTCAAGCCGAATTTCAGAATGAAgatGAACTTTTAAAACATATGGAAGTTCATGCAGTAACAAAAATggttaaaaatgaaaatgattCATTGGTTTGTCCATATTGCAAGCTAGATTTTCTGACATTAGCTGATTACAAGCAGCATATTGAGAAACATGTTGAAGTTAAAAGAAATGTTCTTAAGGGAAAGAaacctaaaagaaaaaaaggtaGAGAAAGAATTACTAGTCATAAATGTAAATATTGTggtaaaatgttttcaaaaggATGTTTGTTAGAAAGGCATGAAAGAATTCATACAGGAGAGAAGCCTTATGTtTGTAAAATATGTAACAGAGCATTTGCCCAAAATGGGACATTACTAATTCACTTAGGAAGCCATACAGGTTACAAACCTTATTCCTGTTCACTGTGTCCAGCAAAATTTACCCAAAAAGgCAATCTTAGAGCTCATATTGATAAAACCCATACAGCACCCCAAGGAAAccaaaaaacatataaatgCACTCAGTGTGCTTGTATTTTCAAGAAAATTGCCACTTTAAATGGTCATATCACCAAAGTGCACTtaacaacaaaatatcaagaaaacaATGCTGAATCTGATGATGCAGTAGATCAAGCTTTGGATGGATTGAAAAAGCTTAATGAAGCTTTGAACAAGCTAAAAGATTCAGTAAAAACTGAtattaagttGTCAGTCGACAGCAGTAATGGTGTGCCAGGTAGTAGTTTAGTTAAATTAGCAGAATCAGAAGCCAATGGTGACATCAGAAGGTACCTAGTTAGACAGAAAAAGATAGGAGATGTCAGATGGTACTTCTGTGACTATTGTACGAGTAGATTTAAAAAACCATCAGATTTGATCAGGCATATACGTACCCATACTTTAGAAAAACCATTTAAGTGTACAAAATGCAATCAGTCTTTTGCTTTGAAGTCCACACTGATGAATCACCATAAAACTCACATCAGCGCATGCTGTGAATGCAATTACTGTGATAGTAGATTTAGAAGCGACAAAAATTTAGAAGCACATCTCAAGAGGCATGAAAGGTCAGCAAGAATGCCCAGTTTTTACTGTACTTTATGTGACAAAGTATTTTGCTCATTGGAAGAAGCCAATAAACATCGTTCAGTGCATGAAATTGAGAATCAAAATACACTTAATATTATACAGCCAATAGAAAAAGAACCGTTATATCAAACAGTTTATGgCTCATTGCCATTAAAACCACCAAAATCTAGATTATCTAACACTGGAAATGAGTGTCCATCTGAGAGACCTCATCATTGTAAAATTTGCGATGCAAGATTTAAGAGACTGAGGGGTTTAAAAAGACACGTCATGTATCATACAGgtgaaagaaaatttaaatgtattatatGTCCAAAGGCGTTCATAACTAAATATCGGTTAAAAGAACACATGAATTAtcacaaaaatattagaaactattGTTGTCTAACTTGCGGCAAAAAATTTGTTACAGCTTCATTATTGAAAAGACATACTATAGTTCATAACACATTAAAACCATATTTGTGTCCATATTGTAGTAAGTGTTTTAAAACTTTGTTACTAACAAGGACTCATATTAGAAATGTGCATAAGTTGAATTTACTTGGGAAAGATGTAAATACAGCCGGTAGTAGTGGTGCTTCAAATGAATCATCCAAGATTTCAATGGTTTTGAATATAGAACCTCAGCCAGCTTTGCCTGAACCAACTCCAACTTATGAAATGGTTTATTTAAACTTTGGCGATGTTGAATTAACTAATCAGGATCCAAATACTATCGGCAACGTTCCACTGAACACTCTAAAAATACCGAACGAACCACTTTTACCTGACCATATTCAAGCAAGTCCTGCCTTATATAATGTAGAGGTCGATAAACCAGAAATGATTGATTCAACTGATATAGTTAAATATTGTTACGGTCATGGAAAACTGGCAACACCATTTAGTGAATTAAACCTGTTCTCTGCCGTCGATCTTAGCAGCGCTCCCGTTAATTTAGgACAAAAAGAAGGGATGGATATATTAACTGCGCAAGTGTTGTGCGTGAACTGTCACAAAATGTTTTCTGATATGGCGGTGTTCCAAAGTCACGCATGTTCAACTACTGCAGAGAGTATTAATGTTCAGACGGccaaaaaaaatttagtaaagGAAGAAACCGAATTAAAGGAAACCAAACTCAAACAGAATTCTTGTAGTTTGTGTCCTTACGTCACGAACAGCGAGGAAAAATTACGCAGACACTTGAGTTTTAACCATACAGACACTGTAGATAAAGTTTGCAAATTCTGTTATAAGGATTTTAAGAAACCATCAGATTTGGCACGTCATTTGAGAACGCATACTGGGGAACGCCCTTATGAATGTACACAATGCAAAAagaaattttcattaaaatcgaCTTTAGAATCCCATAGCCGAACGCATGACAGTAGCAGTCAAAAAACCGTTGTTTGTGACGTTTGCAACGCCAATTTGACCACCAAATCTAGCTTAAAAGTCCATATGTTACTTCATACAGGAGAGAGACCGTACGCTTGTAATTTCTGTGACCAGACGTTTCGAACGTCGGCAATTCGACGTgctcatgaaaaaaatattcatgtgAATGGAGTAAAACATACGCAACAGCCCCCAAAGGGTTTCAAACTTATGAAATATGTGGCAGAAGAGTTAGTAGAGGATCTACAGCGTCAAGAACAGCCAAAAATCCAAGAACAAATAATTTTGGCACCAAACCAAGAACCTCTTTCTTTAGATTCAGTcaattttcttcaaaatattcaaaattcttCGATAATCGTTGCCGAGAACGCCATTCCCTTCAGTTTGAGTGATATCGCTCTCATAAATTATGGAGAGGAGCAAAATCTAATGGATTTGAAAGATTTGGATGAAACCTTGCAAAATGAAGAGGTGACTTGTAAAGTTCCTCAAGCAAAATCTTCTAAAATTGAATGCGATTTGTGTCACAAATTGTACGCTTCTAAGGATGTTCTTAGAAAGCACAAGAAGAACGTTCATGGACAGAATAAGAAGTTCCCCTGCATTAAATGTGATAAAGGTTATGATGACTCAGAAGAACTTAATAAGCACATCATCAAGGTTCATACAGGACATAGGCCATATTCTTGTCAGTATTGTCCAAACAGTTTTGGAGAATCAAATAGTTTGAAGACTCACATAAAGAgAATCCACCAAAAATCTCTGCTAACTCAAGAGACAAACAGTGCTCTTATAGGCCTACAATTTGATTTGCCATTAGAGAATTCTTTGAACATTTAA
Protein Sequence: MITAGLDSLHIFLDNNRDNNGTRNNAQNASVDNQLIAQNCFIRQLEDGNYELVFYNTQDSQNGNECVGIDELNKDVSCEKLVEKTNDKVGPKGVKVSVIQTNKIETKPTEHVKTPTNKLLGSIKLEKPSINTTIYSCIKCKDQFNSLTLFRTHLKLHKTEKKFSCTKCLTGFNIENNLKVHMTIYHTGHTDVCPICKIKFQRKASLKSHVIVHQVEELMSCDECQAEFQNEDELLKHMEVHAVTKMVKNENDSLVCPYCKLDFLTLADYKQHIEKHVEVKRNVLKGKKPKRKKGRERITSHKCKYCGKMFSKGCLLERHERIHTGEKPYVCKICNRAFAQNGTLLIHLGSHTGYKPYSCSLCPAKFTQKGNLRAHIDKTHTAPQGNQKTYKCTQCACIFKKIATLNGHITKVHLTTKYQENNAESDDAVDQALDGLKKLNEALNKLKDSVKTDIKLSVDSSNGVPGSSLVKLAESEANGDIRRYLVRQKKIGDVRWYFCDYCTSRFKKPSDLIRHIRTHTLEKPFKCTKCNQSFALKSTLMNHHKTHISACCECNYCDSRFRSDKNLEAHLKRHERSARMPSFYCTLCDKVFCSLEEANKHRSVHEIENQNTLNIIQPIEKEPLYQTVYGSLPLKPPKSRLSNTGNECPSERPHHCKICDARFKRLRGLKRHVMYHTGERKFKCIICPKAFITKYRLKEHMNYHKNIRNYCCLTCGKKFVTASLLKRHTIVHNTLKPYLCPYCSKCFKTLLLTRTHIRNVHKLNLLGKDVNTAGSSGASNESSKISMVLNIEPQPALPEPTPTYEMVYLNFGDVELTNQDPNTIGNVPLNTLKIPNEPLLPDHIQASPALYNVEVDKPEMIDSTDIVKYCYGHGKLATPFSELNLFSAVDLSSAPVNLGQKEGMDILTAQVLCVNCHKMFSDMAVFQSHACSTTAESINVQTAKKNLVKEETELKETKLKQNSCSLCPYVTNSEEKLRRHLSFNHTDTVDKVCKFCYKDFKKPSDLARHLRTHTGERPYECTQCKKKFSLKSTLESHSRTHDSSSQKTVVCDVCNANLTTKSSLKVHMLLHTGERPYACNFCDQTFRTSAIRRAHEKNIHVNGVKHTQQPPKGFKLMKYVAEELVEDLQRQEQPKIQEQIILAPNQEPLSLDSVNFLQNIQNSSIIVAENAIPFSLSDIALINYGEEQNLMDLKDLDETLQNEEVTCKVPQAKSSKIECDLCHKLYASKDVLRKHKKNVHGQNKKFPCIKCDKGYDDSEELNKHIIKVHTGHRPYSCQYCPNSFGESNSLKTHIKRIHQKSLLTQETNSALIGLQFDLPLENSLNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -