Sory008552.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sitophilus oryzae
Gene Symbol
Zbtb41
Assembly
GCA_002938485.2
Location
NW:1979807-2003156[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 30 7.8 4e+02 1.5 2.4 1 23 214 237 214 237 0.90
2 30 0.00059 0.031 14.4 0.7 1 23 248 271 248 271 0.97
3 30 0.0023 0.12 12.6 2.4 1 23 277 299 277 299 0.97
4 30 7.3e-06 0.00038 20.4 0.9 1 23 305 327 305 327 0.98
5 30 0.015 0.77 10.0 1.1 1 20 331 350 331 353 0.95
6 30 2.1e-07 1.1e-05 25.3 0.5 1 23 359 381 359 381 0.98
7 30 1.6e-05 0.00082 19.4 0.3 3 23 387 407 385 407 0.97
8 30 5.7e-06 0.0003 20.8 1.8 1 23 413 435 413 435 0.99
9 30 0.00051 0.027 14.6 0.8 2 23 611 632 610 632 0.92
10 30 0.012 0.6 10.4 1.1 1 23 638 661 638 661 0.91
11 30 1.1e-06 5.7e-05 23.0 5.3 1 23 668 690 668 690 0.99
12 30 7.3e-06 0.00038 20.4 0.1 3 23 698 719 697 719 0.96
13 30 0.00039 0.02 15.0 0.9 1 23 724 746 724 746 0.99
14 30 0.00011 0.0058 16.7 1.1 2 23 753 774 752 774 0.97
15 30 0.0044 0.23 11.7 0.9 3 23 780 801 778 801 0.94
16 30 0.074 3.9 7.8 2.0 1 23 807 830 807 830 0.93
17 30 0.1 5.3 7.4 1.7 1 13 834 846 834 847 0.93
18 30 3.1e-06 0.00016 21.6 2.6 1 23 999 1021 999 1021 0.98
19 30 0.0023 0.12 12.6 4.1 1 23 1027 1049 1027 1049 0.97
20 30 3.9e-05 0.002 18.1 4.5 1 23 1055 1077 1055 1077 0.98
21 30 4e-05 0.0021 18.1 0.8 1 23 1083 1105 1083 1105 0.97
22 30 6 3.1e+02 1.8 0.4 1 8 1111 1118 1111 1122 0.89
23 30 3.1e-06 0.00016 21.6 2.5 1 23 1280 1302 1280 1302 0.98
24 30 0.0026 0.14 12.4 1.7 3 23 1310 1330 1309 1330 0.99
25 30 3.9e-05 0.002 18.1 4.5 1 23 1336 1358 1336 1358 0.98
26 30 4e-05 0.0021 18.1 0.8 1 23 1364 1386 1364 1386 0.97
27 30 0.00061 0.032 14.4 1.6 1 23 1392 1414 1392 1414 0.98
28 30 0.0012 0.064 13.4 1.1 1 23 1420 1442 1420 1442 0.92
29 30 0.00032 0.017 15.3 0.8 1 23 1448 1470 1448 1470 0.98
30 30 3e-06 0.00016 21.6 1.3 1 23 1476 1499 1476 1499 0.98

Sequence Information

Coding Sequence
ATGTCCGATAAAATTCAGTATAACTCCGATTTAAAGAAGCTGTGTAGGACGTGTTTGTCCCCTTTAGCTGCTGAAGAAAAATTTTCCATTTTCAAAGATTTTCTCGTCGCTAAACACTTGAGTGAAATAACAAAAGTCCAATTTGTACACCATTCAGCTTTATCTGCTGAACTGTGTCCGAAATGCCACCAAAACCTTAAAACAGCAATAGACTTCAGAGACCAAGTACAAAACATCgaattgcaatttaaaaaaattgcaaagctTTTAAACGAGGCCAGTCAAATTCCCTATGTTGAAGTAGTAGACCTGGTTGATAGTGATAATTCTACCCAGAATAATGTAGAGAAAAATACAAAAGGGACTAATACGGAACCTCTACAAACTTTAGATTTAAATATTAGGGAAATTATTGTAGAAAAATCACCTATTCATGAGAGTATTattaatACAGACACCTTAGAAGATTTACAAGACAAAAGTGACAATGAAATGAATTTAGAAAATGCATCTAGTCAAGAGGATATTgttaaCTTAATTACTGAAAGTGATACAGAAAATGTAGAGAATacagaaaatatagaaaatacacTTAGTCAAGATGTTATTGAAGATGATCCTCCAATTCCAAAAAAGTCATTTGCATGCCTGTACTGCGACAGACTGTTTATTTTTCACAGTAGTTGTATAGAACATGAAAAAGTGGTTCACTCCAATGGTCAAACGATTGAGAGGAAACAATTCGAATGCAGTATTTGtgGTGAACAATTTTCGCGCAGAGGAGTGTACAGAGGCCATCTTAAGAAGAAACACCGGAATATAAGACCTTTTGCCTGTAAAATATGTAAgaatatatattatacaaaGCACGATTTAGCTCATCATATGGCGGTGCACCGCACAGAGAGGCCGTATATGTGTGATCTATGTCCAAAGACATTCAACACTTCTCGTAATTTACTGAACCACAAAATGGTCCATAAAAAGGCGTATCAGTGTGAACTATGCGGACTCAAGTTATCCACAAATGCCAGTCTAAACATGCATAAAATTTGTCACACagATGAGAGAAATTTTATTTGCGACATTTGCGGGAAAGCCTTTAAATCGAAGACAAACCTAATGTGGCACAAAAGGGTTCACTTAAATCCCGTGAACTGTACCATTTGCGAAAAAGAATTCACCACAGAAACGTACTTGAATATTCACATGAAAATTCACACAAAAGAAAAACCTTACAAATGCGATGTTTGTGGAAAAGGGTTTCAATTTAATGGTAACTTGAAGAAGCATAAAAAGAGCCATGCTGTTGCTGATGAGTTACAACACAAAACAGCAGAATCTATATGCAAAACTTGTTTGAAATATCTGCTCATTGCGACacaatacaaacaacaaattcTGAGAGTCGAATTGCGCTTGCAGAACATTATAAAAATGACTGTTGATAATAATGATACGGATTTCGATTTTCCTTATATTACACCTGAGAATCCAATTGACGAAGAAAACTTGAACATTGACccTGAATCTTGCAATGTTAAAGTCGAACCTTCTGAGTCAGGAGATGAACATAATGTATTAGAGGCAGAGTTAGAAGAGGGTGAAGTTGTTGAGGAAAATAACACTGATGATAACTGTGATTCATCTGAACCTAAAGATCAACCTGATAATGACATAGCTAATATTACTgatgttttaattaaaactgaaaACATACCTAGTGTTGAGGAGGATCCGATTGCTGTAAATGTAGCTCATGTCAAAGAGGTACATCCAAAAGAAAAGCCCGTCAAAGAGCCACGTTATAAGGATAAACCCGCACTAATTAGCTGCGATTTGTGcgataaaaagtttaaatataaCTATTCTTTGAAGCTTCATTCGGTAGTACATACTGGGGAAAAATTGTACAAATGTACATACTGCGatgaaaaattcAAATCTACGCCAATGCGAATTGAACACGAGAAAATTACTCATACCGGGGGGATCACACCTTACAAATGCGAAATCTGTCACAagtttttcaacaaaaaatacaacctGACGCTCCATATAAGGACTCATACTCGAGAGAATCCCGTCGCATGTCCGGATTGTCCAAAAagaTTTCGCAATCGGAGTGCTTTGAGTGCTCACGTGCAGGTTAACCATTCGGAAAAGAAGTACCAGTGTGAAATGTGCGGGTACAAAGCTAGTACCATGTACGTCCTGAAACGTCACATTAAGAGGCATGTTTTGGACAAGTCACTGCCATGTGACGTGTGCAACAAGATGTTCCAAACGGAAAAAGATCTTCGCTATCACAGGAGGAGGCACACGGAACGGTTTGGCTGTTCGATGTGCAACGTAAAATTCAGGACAAGGTTGTATTTGAAGAAGCACATTGAGGAATCCCACGAAGGACAGTCTCCGTTCGACTGTAGCATCTGCAAGCAAAGGTTTGAATCTGCAAAAGATTTGAGATTTCACAGATTCACTCAGCAcccaaaaaaattcaaatgcgATCTTTGCAATCGAAGTTTCCGTAATAAGtttattcaaaaatataaactaataaATTCAATAAATTTTAACCCAATGGCTCAGGAAATCCAAATTGTACCCGATCTATATAAGTTATGCAGGACCTGCCTTTCACAACATTCCCCAGAAAACATGAAATTCTTATTCGGAaacgaaaatatagccaaaagTTTGAGTGAACTTATCAATATAAAGATTGACTTAGATGTATATTCTCCAACCTGTATATGCACTGGGTGTTTAGAGAAACTCAATGTGGCTGTTGGGTTTTGTAAACAAGCAAGACATGCAGAtggtgaattaaaaaatatagtagaGCCGTTAAAAAGTACAAATGAAACATTAAATACAGGCAGTTTTGTAAATTTCAATGATGATAATTTGTCAGTTTGTATAATTTTAAGGGAAGATTCAGGACTTGAAAACTTAAATGTACATAGGACAATACATGTCAAGAATGAAAAATTTGAGTGTGAAAACTGTAAAAAAACGTTTTCTAACAGACGTAATCTGAAAAATCACGAGAAAATTCATACTGGTGAAAAGAAACATTCGTGTCACATCTGCGGagcaaaatttataaatattttcagacTAAGAACGCACCAGAGATCACATTCAGGCAAAACACCATATTATTGTAAAGTCTGTAATAAAAATTTCCACTCATCGTCCTACTTAAAAGTACACACGAGAATTCACACATTAGAAAAACCTTATTCATGTACAACATGTCCTAAAATGTTTATAAGTAAAAACATGCTCACTAAACATGAACTTATACATTCGGTTAATAAGGATTACCAGTGTGATAAATGTGGCCACAGATCACTGAGAGAGAataaactatCAAATTTTAACCCAATGGCTCAGGAAATCCAAATTGTACCCGATCTATATAAGTTATGCAGGACCTGCCTTTCACAACATTCCCCAGAAAACATGAAATTCTTAtttggaaacgaaaatatagccaaaagTTTGAGTGAACTTATTAATATAAAGATTGACTTAGATGCATATTCTCCAACCTGTATATGCACAGGGTGTTTAGAGAAACTCAATGTGGCTGTTGGGTTTTGTAAACAAGCAAGACATGCAGAtggtgaattaaaaaatatagtagaGCCGTTAAAAAGTacaaatgaaatattaaatacagaCAGTTTTGTAAATTTCAATAATGATGATAATTTGTCAGTTTGTATAATTTTAAGGGAAGATTCTAACTTAATAAACAATgaTGTTTTAAGTTCAGGACTTGAAAACTTAAATGTACATAGGACAATACATGTCAAGAATGAAAAATTTGAGTGTGAAAACTGTAAAAAAACGTTTTCTAACAGACGTAATCTGAGAAATCACGAGAAAATTCATACTGGTGAAAAGAAACATGGGTGTCATATCTGCGGagcaaaatttataaatattttcagacTAAGAACGCACCAGAGATCACATTCAGGTGAAACACCATATTATTGTAAAGTCTGTAATAAAAATTTCCACTCATCGTCCTACTTAAAAGTACACACGAGAATTCACACATTAGAAAAACCTTATTCATGTACAACATGTCCTAAAATGTTTATAAGTAAAAACATGCTCACTAAACATGAACTTATACATTCGGTTAATAAGGATTACCAGTGTGATAAATGTGGCCACAGATCACTGAGAGAGAGCGATTTAAATGTTCATATGCGATCGCATTCGGatgatAGACCTTATGCATGTGATACGTGTGGTAAAAGCTACAAAACCACTAGTAACTTGGCATTTCACAAAAAAGGGCACACTGGCGTGAAGAATCACAGATGTTCGATTTGCGACAAACGTTTCATGGATAAAAGGGTTCTTGAGGGTCATATTATGGTTCATACAGGCGAGACTCCATACCAATGTGACATTTGTGGGCAAAGATTTAGACAATCAGGGCAATTTTCAAAACACAAGAGAATTCTGCATTCTGATAGTAATTCCAATAGCTGA
Protein Sequence
MSDKIQYNSDLKKLCRTCLSPLAAEEKFSIFKDFLVAKHLSEITKVQFVHHSALSAELCPKCHQNLKTAIDFRDQVQNIELQFKKIAKLLNEASQIPYVEVVDLVDSDNSTQNNVEKNTKGTNTEPLQTLDLNIREIIVEKSPIHESIINTDTLEDLQDKSDNEMNLENASSQEDIVNLITESDTENVENTENIENTLSQDVIEDDPPIPKKSFACLYCDRLFIFHSSCIEHEKVVHSNGQTIERKQFECSICGEQFSRRGVYRGHLKKKHRNIRPFACKICKNIYYTKHDLAHHMAVHRTERPYMCDLCPKTFNTSRNLLNHKMVHKKAYQCELCGLKLSTNASLNMHKICHTDERNFICDICGKAFKSKTNLMWHKRVHLNPVNCTICEKEFTTETYLNIHMKIHTKEKPYKCDVCGKGFQFNGNLKKHKKSHAVADELQHKTAESICKTCLKYLLIATQYKQQILRVELRLQNIIKMTVDNNDTDFDFPYITPENPIDEENLNIDPESCNVKVEPSESGDEHNVLEAELEEGEVVEENNTDDNCDSSEPKDQPDNDIANITDVLIKTENIPSVEEDPIAVNVAHVKEVHPKEKPVKEPRYKDKPALISCDLCDKKFKYNYSLKLHSVVHTGEKLYKCTYCDEKFKSTPMRIEHEKITHTGGITPYKCEICHKFFNKKYNLTLHIRTHTRENPVACPDCPKRFRNRSALSAHVQVNHSEKKYQCEMCGYKASTMYVLKRHIKRHVLDKSLPCDVCNKMFQTEKDLRYHRRRHTERFGCSMCNVKFRTRLYLKKHIEESHEGQSPFDCSICKQRFESAKDLRFHRFTQHPKKFKCDLCNRSFRNKFIQKYKLINSINFNPMAQEIQIVPDLYKLCRTCLSQHSPENMKFLFGNENIAKSLSELINIKIDLDVYSPTCICTGCLEKLNVAVGFCKQARHADGELKNIVEPLKSTNETLNTGSFVNFNDDNLSVCIILREDSGLENLNVHRTIHVKNEKFECENCKKTFSNRRNLKNHEKIHTGEKKHSCHICGAKFINIFRLRTHQRSHSGKTPYYCKVCNKNFHSSSYLKVHTRIHTLEKPYSCTTCPKMFISKNMLTKHELIHSVNKDYQCDKCGHRSLRENKLSNFNPMAQEIQIVPDLYKLCRTCLSQHSPENMKFLFGNENIAKSLSELINIKIDLDAYSPTCICTGCLEKLNVAVGFCKQARHADGELKNIVEPLKSTNEILNTDSFVNFNNDDNLSVCIILREDSNLINNDVLSSGLENLNVHRTIHVKNEKFECENCKKTFSNRRNLRNHEKIHTGEKKHGCHICGAKFINIFRLRTHQRSHSGETPYYCKVCNKNFHSSSYLKVHTRIHTLEKPYSCTTCPKMFISKNMLTKHELIHSVNKDYQCDKCGHRSLRESDLNVHMRSHSDDRPYACDTCGKSYKTTSNLAFHKKGHTGVKNHRCSICDKRFMDKRVLEGHIMVHTGETPYQCDICGQRFRQSGQFSKHKRILHSDSNSNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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