Sory004773.1
Basic Information
- Insect
- Sitophilus oryzae
- Gene Symbol
- CSRNP3
- Assembly
- GCA_002938485.2
- Location
- NW:581401-601656[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.3e-104 1e-99 332.5 8.5 1 218 166 375 166 375 0.95 2 2 0.012 1.8e+02 1.6 1.6 34 93 463 524 452 548 0.49
Sequence Information
- Coding Sequence
- ATGGGATCCAGCGAGTCTAGCTTGGACTCTTTGAAAGGCTACGATAAGTCAATTCAGTTGTCAGAATCTCCAGCCACCATGAGCGACAGTTTCAAATCGACCGACGCACAACCCTCCGACCAGGAAATAATGGCCCTAGCTATCCACGAGGGCGAGGACTCGGCCACCGAAAGCTTACCAGCCACTGAAGAGCTGGTGGAAGAACCCCACGACAGATCTGACGGCTCAGATTCCGGCCTAGGCTCGGAAATTGCCGAGGAAAGGGTGGATAACGCCCCCAACGCACCCAGCTATGAAAGCGACAGCGAAACTACATTCCTGGACAGGATAAATGAATCTGAACCTTCAACGAGCAAAGCTGGAGAACAGGAATCTTCAGGTGCTTCCTCGAGCTCGAGACCTATCTCAGATCTCGTTGCCATACTTAAAAAGGGACCTACCAAGAGTAACCTGAAGAGGAAGTTGCAGTTGGAGGAGACTGATCAGCCGAAAGTGAAGAAAAAAAGAGGGATTACATTTGATAGCGTTACGGTGTTCTATTTTCCGAGGGCTCAAGGGTTTACGTGTGTCCCTTCGCAAGGAGGGTCTACTTTGGGAATGGCTGCACAGCATCATCAGGTGAGGAAGTTCTCCATTATGGAGCATGCTAATGAACAACGCAGAATACATCGACAACTTGTTCAACAGCTCAGAGCGGAAAGAAGCGTAAACTTCGGCCCCCTGACCTGGTCCAGCGACGACAGCGACAGCGAGGACGAACTCAGCGACGCCTCCGAATCCGAGATGGACCTCGACAACTACTACTTCCTCCAACCGGTCCCCACCAGACAGCGCAGGGCCCTGCTCAGAGCCTCCGGAGTGCGAAAAATCGACTCCATGGAGAAGGACGAGTGCAGGAACATCCGAACTTCCAGAGAATCCTGCGGTTGCGGTTGCAAAGGATACTGCGATCCTGATACGTGCTCTTGCAGCCAGGCCGGCATCAAATGCCAGGTGGATAGACTCAATTTTCCTTGCGGTTGTACTAAGGACAACTGCGGGAACTCTACGGGAAGAATAGAGTTTAATCCTGTGAGGGTTCGGACCCACTTCATCCATACTTTGATGAGACTGGAGCTGGAGAAGAAGCAGGAGGAAGAATTGAGGGAGAAGAGACATAACTGGATGAACAACGAGAGACTCCAGCAGGATTCGGTGCAGATGAATGTGGTGAGTAAGTGTTCGGGCCAGCTGCTCAGAGACATCAGCCTGAACGCTTACATAGAGGTGGAGAATTGCGTGAATAGTGGTAGTTTTACCAACTTGCACTATGGCGCTCCCGGAGAGGGACCTGGTGGtttaggaggaggaggaggagtaGTAGGAGGGAGTAATTCTTCGACGGCGGGGTTTGGAGAATTGCCGGAGAGTGACGACTCGTTCGACTTGTACCAGTACAGGGAGAACTGTTACAGGGAACAAGCCGATAGAAAACAACAGCACCAAGCACACCAACAgcaccaccaccaccaccagCACCAGCCCTTTACCTCCCAACTGGCCTGCTCTGCGAATCATCATCAGGTCTTTACCCAACAGCAGCAGCAACAACCGACGCCGGCAACCACGCAATTCGATCCACGCTTTGCTTCGAGTTCAACCGAATCGCCGTCGGCTTTTTCCGGCCAGCAACACCCGAACGCCCCCGTCCATCCCTACGCCCCTGCAATCGCGCCACCCCCACCCAACACGACCGCCCCCACCACCGGCATCAATCAATACGGCAACGCAGCGTCTGCGCAGCAGTTCCATGCGACGTTCGGCGCCGGCGCCGTTGCCGAGTTCGCGACGAACGGGGCAGGAGGCGGAGGAGGAGGAATCGGCAACGGTGCGGCGTTCAATACGTACGCGGGCATCTACGGAAATTTCCAACAACAGATCCCAGCCAACAGCTTCGACCAATTCCCCCAAGCCGAACACTACGCCAACGAGACGAAGGAGAACCAATACACCAACCTGAACACAGTGTCTACAAGTTCCAAACTTGAATCTTCGTTCAGCGACTTGTTAAACAATCGCTACGCCTACGCCACGTACGAGGAGACGACCAGTTTCGCCAACTCAACGCCCGACCAACCGACGGCAAGCGCTGTTGCCAACGTGGCGGATCGCATCGTCAACCCTGAGGCCAACCCTGACGATTGCGACGAGAATTTCGGCGAAATCATCAAGAAAACGATGGTCGAAACAGTGTCGGCGTAA
- Protein Sequence
- MGSSESSLDSLKGYDKSIQLSESPATMSDSFKSTDAQPSDQEIMALAIHEGEDSATESLPATEELVEEPHDRSDGSDSGLGSEIAEERVDNAPNAPSYESDSETTFLDRINESEPSTSKAGEQESSGASSSSRPISDLVAILKKGPTKSNLKRKLQLEETDQPKVKKKRGITFDSVTVFYFPRAQGFTCVPSQGGSTLGMAAQHHQVRKFSIMEHANEQRRIHRQLVQQLRAERSVNFGPLTWSSDDSDSEDELSDASESEMDLDNYYFLQPVPTRQRRALLRASGVRKIDSMEKDECRNIRTSRESCGCGCKGYCDPDTCSCSQAGIKCQVDRLNFPCGCTKDNCGNSTGRIEFNPVRVRTHFIHTLMRLELEKKQEEELREKRHNWMNNERLQQDSVQMNVVSKCSGQLLRDISLNAYIEVENCVNSGSFTNLHYGAPGEGPGGLGGGGGVVGGSNSSTAGFGELPESDDSFDLYQYRENCYREQADRKQQHQAHQQHHHHHQHQPFTSQLACSANHHQVFTQQQQQQPTPATTQFDPRFASSSTESPSAFSGQQHPNAPVHPYAPAIAPPPPNTTAPTTGINQYGNAASAQQFHATFGAGAVAEFATNGAGGGGGGIGNGAAFNTYAGIYGNFQQQIPANSFDQFPQAEHYANETKENQYTNLNTVSTSSKLESSFSDLLNNRYAYATYEETTSFANSTPDQPTASAVANVADRIVNPEANPDDCDENFGEIIKKTMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -