Sory012827.1
Basic Information
- Insect
- Sitophilus oryzae
- Gene Symbol
- DNAJC1
- Assembly
- GCA_002938485.2
- Location
- NW:2988822-2990493[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-07 0.00024 20.8 0.0 2 34 273 308 272 312 0.86 2 2 1.2e-09 8.9e-07 28.6 0.1 3 43 355 399 354 401 0.92
Sequence Information
- Coding Sequence
- ATGGGCTTCTTTCACATAGTCCTAGTTCTTATTTTTACTAGTTCTAGTTTAGCTTGGGACTCGGAGCAACTTGAAGTGTTTGACGTTGTGGATGAAGTGAAACAGAATTTCTATGAACTTTTAAATGTCTCTCAAGATGCCTCAAGTGCAGAAATTAGATCAGCTTTTCGATTATTATCGCTCAAGTTACATCCCGATAAGAACCCAGATGTGGACACAAATGAACAGTTTCGTAACTTAGTTTCTGTGTATGAAATCCTTAAAACTCCATCAAAAAGGAAGTATTACGATGAGGTTTTAGTCAACGGTTTACCCAATTGGAGATCtgctgtatattattacagaTATGTTAGAAAAATGGGCTTGATTGAAGTATGCCTgatattatttgtaattttaacaaTTGGACAATATTTAGTATACTGGGCGGCGTATTTGGAAAAGAAATTTACAATTGAAGAGAATCTCAAGAAAAAGAAACCACCAAAAAAAGGAAGAATGCTTGAAGAAGATTTAGACATTATCATCCCAAAACCATCAGTATTCGATACTTTACCATTTCAGATTCCTAAATTAGTGTGGTTTTCTATCATTTCCATTCCTTCCGCTCTAGGATTCATAAAGACTGCAGTAACACAACAGATAGAAGAATCTAAAAAGCCTCCACCTGAACCAGAACCGGTGCCTGTGAAAATCAAAACCGTGAGGAAACGAAATAAGTTTGTTGTTCCAGAGGGTCCCAATTTTGAAACAACCCCAACAGGTGGTACTTTTAGTGACGGTTCTGTCTCATCTCCTCCTCCTCCAGTATCTGGGGGTCTGTGGACTGATGATGACTTAGATGAATTGATTCGTCTAGTAAAAAAGTATCCACAAGGGTCCCCTGGAAGGTGGGAAAGCATTGCGGATGCACTAAACCGATCTGTGCCAGAAGTGACATACATGGCAAGCAAAATGAAGGAGAATGGATATAGACTGCCTTCAGAAAGGGAGGAGGAGTTACCacaaataaaaaccaaacagaaaacgaaaaaagatgTGGATACAAGTGATAATATTACGAAATGGAGTCAGGTACAGCAAAAATCTTTGGAGGATGCGCTGGCAAAGTATCCTAAAGGCTGTACGGATAGATGGGATAGGATAGCTGATAATGTTCCAGATAAAACAAAGGAAGAATGTATGATGCGGTTTAAATATTTGGCAGAAGCGTTAAAAAAGCAGAAAGAATCAGTGAGTAATGCTGTTTTAGATGGGAATGAAGTTTCGGAAAATGCAGAATCATAA
- Protein Sequence
- MGFFHIVLVLIFTSSSLAWDSEQLEVFDVVDEVKQNFYELLNVSQDASSAEIRSAFRLLSLKLHPDKNPDVDTNEQFRNLVSVYEILKTPSKRKYYDEVLVNGLPNWRSAVYYYRYVRKMGLIEVCLILFVILTIGQYLVYWAAYLEKKFTIEENLKKKKPPKKGRMLEEDLDIIIPKPSVFDTLPFQIPKLVWFSIISIPSALGFIKTAVTQQIEESKKPPPEPEPVPVKIKTVRKRNKFVVPEGPNFETTPTGGTFSDGSVSSPPPPVSGGLWTDDDLDELIRLVKKYPQGSPGRWESIADALNRSVPEVTYMASKMKENGYRLPSEREEELPQIKTKQKTKKDVDTSDNITKWSQVQQKSLEDALAKYPKGCTDRWDRIADNVPDKTKEECMMRFKYLAEALKKQKESVSNAVLDGNEVSENAES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -