Sory003297.1
Basic Information
- Insect
- Sitophilus oryzae
- Gene Symbol
- CDC5L
- Assembly
- GCA_002938485.2
- Location
- NW:763018-777538[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-16 1e-13 50.8 1.5 2 46 9 54 8 54 0.97 2 2 4.9e-12 3.7e-09 36.2 0.1 1 45 60 103 60 104 0.93
Sequence Information
- Coding Sequence
- ATGCCGCGAATTATGATAAAAGGCGGAGTGTGGCGGAACACAGAAGATGAAATCCTTAAGGCTGCTGTTATGAAATATGGCAAAAATCAGTGGTCCCGTATTGCGTCGTTGTTACATAGAAAATCAGCGAAACAATGTAAGGCACGTTGGTTTGAATGGTTAGATCCAAGTATAAAGAAAACAGAATGGTCAAGAGAAGAAGATGAAAAGCTATTGCATTTAGCAAAGCTAATGCCTACGCAGTGGCGAACAATAGCCCCAATTATTGGCCGTACTGCTGCTCAGTGTTTAGAAAGATATGAATATTTGTTGGATCAAGCACAAAAGAAAGAAGATGGTGAAGATACTGCTGATGACCCAAGGAAACTTAAGCCTGGCGAAATTGATCCCAATCCGGAAACTAAACCTGCCAGACCTGATCCAAAAGATATGGATGAAGATGAACTTGAAATGTTATCAGAAGCTCGTGCTCGATTGGCAAATACTCAAGGAAAGAAAGCAAAACGTAAAGCTAGAGAAAAACAACTTGAAGAGGCGAGACGTCTGGCAGCTTTGCAGAAAAGAAGAGAACTTCGAGCAGCAGGAATTGAAGTCAATCCTCGTCGGCGAAAAAAGCGTGGTGTTGATTATAATGCGGAAATACCTTTTGAAAAACGACCTGCTATTGGATTTTATGATACATCAAATGAGgctCTTGATCCTATGGCACCAGACTTTTCTAAAATGACCCAGCAGGCCTTGGATGGCGAAATAAGAAGTGAACAAGAAGAAAAAGAGAGGAAGAAAGATAAACAGAAATTGAAACAAAGGAAAGAGAATGACATACCACAGGCAATGTTACAGAACCAAGAACCTGCTAAGAAAAGATCAAAACTGGTTTTGCCCGAACCACAGATTTCCGACCAAGAACTTCATCAAGTTGTTAAACTGGGAAAAGCGAGCGAAGTGGCGCGCGAAGTAGCTTCCGAGAGTGGAATTGACAGTACCGACACGTTGCTGAATGATTATACTTTAACCCCTCAAGCAGCTGCAACGCCTAGAACTCCTGCTCCTGTCACTGATAGAATTCTTCAAGAAGCTCAAAATGTCATGGCCCTTACCCATGTCGATACCCCACtctatgtagagttaaaTTCAGAGATTACGCGCgttctatattaataattaaaacaagtaatatttttttagacaatagcTACACCAAACACAGTAATTGCCACACCGTTTAGGTCAGCCAGAAGTGACGGCGGTATTACACCAGCCAGTTCAGGTTTTGCAACACCTCGTAGTGGAGCGTTGGTTCCGGTAGGACAAGGGAGTAGTTTTACTCCCTCAGTTAGGGACAAACTTAACATTAATGCAGAGGagAGTCTAGAGGCTGCAGAAACGCCAGTGCAACAGCGCATATATCAAACCTCTCTTAAAGAGCAACTAAAAATGGGTTTAAGTAGTTTACCCCAGCCAAAGAACGACTACGAAATAGTTGTTCCAGAGCAAGTTGATCAGGAGATGCCAGAACAAGCTCAAGagCACATGATTGAAGATCAAGCAGATATTGACAAGAGATATCAAGAGGATTTGAAAGCAAAAGCAGCAAAAGAGTTAGCAATGAGATCTCaggttatacaaAGAGATTTTCCCAGACCATTAGATGTAAACCTTTCCGTTTTGCGACCTCCTAATGAAAATTATTCGTTGACTGAACTGCAAAAGGCGGAAGAATTGATAAAATGCGAAATGGCCACTATGCTACATTTCGACAACTTAAAGAATCCCATACCCAATCAAAGTAAACAATCTACCAAGTCGCAAGCTCAACAGTTAGCATTTTTAGAAGAGCATCCGTATCAAAATTTTAGACCAGATGAACTGGAACTGTCgaagaaaatgttaaaaaaagaaATGGAAATTGTCAAAATGGGAATGAATCATGGTGAATTGCCCATAGAAGCGTACACTCAAGTGTGGGAGGAGTGTTTGGGTCAAGTGTTGTTTTTACCAAATCAAAACAGATATACTAGGGCCAATTTAGCTAATAAAAAAGACAGattgGAGTCTGCGGAGAAGCGCTTGGAACAGAATCGATCGCATATGGCCAAAGAAGCCAAACGGGCTGCAAAAAtggagaagaaattgaaaattttaactGGAGGTTATCAGTCTAAGGCCCAGGTACTCATCAAACAGCTCCAAGATGCTTATGAGAATATTGATCAAGCTAATTTGGAACTGAATACTTTCAAGTTTTTGCAAGAACAAGAAAAGAATGCTTTGCCTAGAAGGGTTGAGtCATTAACTGAAGACGTTGACCGACAAATGGAACGAGAAAAAGGATTACAAAAGCGGTATAACGATCTTCAGAACGAAATCAGGGAATTACAAGAGCAATACAAGTATGTGCAACAGGAAGTGTACGAGGAGCAAAGCCAACAAAACGTTGTGACAGATGAAACTGTTGAAAATCATATATCTGATGATCAAAATGTGGTTAGCAGTTCTACAGTGAATGGAATAGATGAGAGCCCTGAAGACGAGTCGAATATGAATTGA
- Protein Sequence
- MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEDGEDTADDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEVNPRRRKKRGVDYNAEIPFEKRPAIGFYDTSNEALDPMAPDFSKMTQQALDGEIRSEQEEKERKKDKQKLKQRKENDIPQAMLQNQEPAKKRSKLVLPEPQISDQELHQVVKLGKASEVAREVASESGIDSTDTLLNDYTLTPQAAATPRTPAPVTDRILQEAQNVMALTHVDTPLYVELNSEITRVLY**LKQVIFF*TIATPNTVIATPFRSARSDGGITPASSGFATPRSGALVPVGQGSSFTPSVRDKLNINAEESLEAAETPVQQRIYQTSLKEQLKMGLSSLPQPKNDYEIVVPEQVDQEMPEQAQEHMIEDQADIDKRYQEDLKAKAAKELAMRSQVIQRDFPRPLDVNLSVLRPPNENYSLTELQKAEELIKCEMATMLHFDNLKNPIPNQSKQSTKSQAQQLAFLEEHPYQNFRPDELELSKKMLKKEMEIVKMGMNHGELPIEAYTQVWEECLGQVLFLPNQNRYTRANLANKKDRLESAEKRLEQNRSHMAKEAKRAAKMEKKLKILTGGYQSKAQVLIKQLQDAYENIDQANLELNTFKFLQEQEKNALPRRVESLTEDVDRQMEREKGLQKRYNDLQNEIRELQEQYKYVQQEVYEEQSQQNVVTDETVENHISDDQNVVSSSTVNGIDESPEDESNMN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00376260; iTF_00444058; iTF_01240583; iTF_01238955; iTF_00196150; iTF_00244182; iTF_00328036; iTF_00413483; iTF_01369324; iTF_01014381; iTF_00110485; iTF_01289880;
- 90% Identity
- -
- 80% Identity
- -