Sory007364.1
Basic Information
- Insect
- Sitophilus oryzae
- Gene Symbol
- ct
- Assembly
- GCA_002938485.2
- Location
- NW:446267-709018[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.1e-23 1.5e-19 69.4 0.0 13 72 404 464 404 469 0.94 2 3 1.7e-32 1.2e-28 98.6 0.0 3 77 784 859 782 861 0.96 3 3 1.1e-30 7.8e-27 92.8 0.0 3 75 1007 1080 1005 1084 0.95
Sequence Information
- Coding Sequence
- ATGCAGCCGACAACTGCTGCAAACGTGCCTCCGAGTGGTGGTGAGATGGATTTGCAGGCGATGCAGAGTATGGAGTGGTTGTTCAAGAAAGAGAGGATTTATCTTTTGGCACAATTCTGGCAACAGAGGGCGACGCTAGCCGAGAAGGAAGTAACAACTTTAAAAGAACAACTGTCCAGCAACAATGGGACAAGCAACTGCGAGAACAAAGACACGTCCAACATGGACAGGCAAAGTTTCGAATCCGAGATGGCTACCAAAGATAAGGAGATTAACCAATTACTAGAAGAAGTCCAAAGATTGCAAGGCTGCATTAACAAAATCCAAGAATCGTCTATATCCCAAATAACGAGACTAGAAGAACAGCTCGATCAGAAACGACAACAAATTGCACGACTAGAAAACAGGCTAGACTCACAGAAGGACTACGATGACCTTAAGAGACAGATGACGATATTAAAGTCGGATCTGGCTAACAATCCAGACTGCAAAAGTATCGAATTGTTTCTGGAAAACACCAAATTACAAGGGCAGGAGTTGAAGGAGAAGAACCAGGCAGGGGATAGTGAAGGGGTGGCGGATCATCCAGCTCAACTCCAACCCCCTATACTCCCCTCTACACCTCCTTCGAACCTTCCACCCCCCTTCCAAAACGTAGACGCCTTCGGAAGCCTCCTAGGCGAGGAAATCGTCTCCTCCTGGCGAAAAAACATCGAAacctatcatcaaaaatcgtcTTTATCTTCTACAGATGGTTCCTTGGTGATCAAAGGCAGTACGTCCTTGTCGGAGACCAACAATGCAACGGAGAAAAGCAGTACGACTTCAACACCTCAACCGATGGACAGTACAGGGTACCAGAGTCCTCACGAAAATTTGGTAGTTGTTAACGGGAACCCAAAAAGTCCTCACGAGGACAACAACAATCACCATGTCAGCAATAACAACATTCCCTTGGTCGCGACGACTTTTGTGAATAACTTCCTGCGATCGGACGATACGCTCAAGAGTCCGTATAGGTTTGATGAGCATCGATCACCGTTTAAGTTTGCAGAAGATTTGGGAATGGCACCTGGATCTATGGTGGGACGGTTGGGAGAAAGTCTGATTCCCAAAGGGGATCCTATGGAGGCTAGGCTGCAAGAGATGCTGAGATATAACATGGACAAATATGCTTCTCAAAATTTAGACACTCTGAACATAGCCTGACGTGTTCATGAGCTACTTTCAATTCATAACATAGGCCAAAGACTGTTTGCCAAATACATCCTCAGGTTGTCCCAAGGTACTGTATCCGAACTACTGTCCAAACCCAAACCGTGGGACAAATTGACTGAAAAAGGACGGGACAGTTATAGAAAAATGCATGCGTGGGCCTGTGATGAAAACGCTATCATGCTGCTTAAGAGTCTTATACCAAAAAAagGAAAAGAGGGTAGCATATCGTTCGGAAGACCAGATAACGACTTAACCGAAGACCGTATCGCTCACATTCTCAACGAAGCCAATCAGTTCACTCAAATCAAAACTGAATCGGACACTCACAGCAATGAGGACTCGAAATCGCCTCACGGGTGCACCAGTCCATTCTCGAAGGATTCCTCGCTAAACAAGAGATTGAAAAAGTATGAGAACGATGATATTTCTCAGGAGAAAGTTGTCAGGATTTATCAGGAAGAATTAGCCAAACTGATGGGCAGAAGAATGGATGAGATTCGGAGTCCCAGAGAAGGTTTTCCTCAAGGCAACGTACCAATAGACCGATCGGATGAGATTCGAATGGCACTGGACGCATACCATCGAGAGTTAGCCAAAATCAACCAGACTCAAGCATCTCCACAAATGCCATTAGGCTTATTAGCCTTGCAACAACAAGCCTTAGTTCAGCATCAACAGAATCAGCAACAAAATCAACAGGCAATGCAAGGAATTCAAGCAACACAACCGATAGGACAACAGAACTCTAATGGAGGTGTCCAGGACTTATCCCTACCAAAAGATAAAGTGAAACTAGTGAATGGTATAGAAGACAGTAAAGAAAAAGACGAAGACACTATGTCACGACATACAGGGAGTGCGTTTAGTCTTGTACGTCCCAAATTGGAGCCTGTATCTGGACCCTCTGGTAACAGTACTGCTTCCAGTCCTTTAGGAAACTCCATACTGCCTCCAATGACACCCACCAGTGAAGATTTTACAGGATCAGCTGCAGCTTCACCTCTTCAACGGATGGCCTCCATCACAAATTCACTAATCTCTCAACCCCCAAGCCAGCCACACCATTCCACACCGCAAAGACCTCTCAAAGCAATCTTACCACCAATCACACAACAGCAATTCGACCTGTACAACAACCTCAACACCGAAGACATAGTGAAAAAGGTCAAAGAACAACTGAGTCAGTACTCAATTTCCCAGCGCCTTTTTGGAGAAAGTGTATTGGGGCTGAGTCAGGGATCAGTCAGTGATTTGCTGGCCAGGCCGAAGCCTTGGCATATGCTGACGCAGAAAGGTAGAGAACCGTTTATCAGAATGAAGATGTTCTTGGAAGATGAGAATGCTGTTCATAAACTGGTTGCTAGTCAATATAAAATTGCTCCGGAGAAACTTATGAGGACTGGTGGTTATGGTACGGcgTGTTCAACGTCTCTTTCAAAACCGCCCAATCTTCAGCCAACGTCAAAAATGCTCTCAGATGCAGCTGGATTATTGACTAAAATCCAGCAAGACTCACAGAATCTTTCCAACTCCCTGCAGCTTGGCCCCCCTCAGGTAAATCAGCCTCCATCACTAGGTCCCCCTAGTGCTGCCCAATTATCCCAAAGTCAACTATTAACTCCCCTAGGAATGCCCCCACATCACGCTATAGCATTACAGAATCAAGACttgttaaaaaaacaaactCATGCGTTACAAGGAGGACATGGAATACCAACGCATCCGAGTATAGGACATCAGTCGATAAGGAATATGCACCAGCATATAAGTCCGAGTGTTTATGAGATGGCAGCACTGACGCAAGATCTGGATACACAAGTTATTACTACGAAAATCAAGGAGGCGTTGTTAGCAAATAATATTGGCCAAAAGatttttgGTGAAGCAGTATTGGGTCTTTCTCAAGGATCGGTTTCGGAGCTTCTGTCCAAGCCGAAGCCTTGGCATATGCTTTCTATCAAAGGCCGGGAACCTTTTATTAGGATGCAGCTTTGGCTCCAAGATGCACATAATGTAGACCGATTACAAGCATTAAAGAACGAACGACGAGAAGCCAATAAACGGCGAAGAAGTTCTGGTCCTGGACAAGATAACTCCAGTGACACCTCCAGCAATGACACTTCGGAATTCTACCATTCGAACAGTCCCGGACCTCAGGGTGCACCCAATGCCAAAAAACAAAGGGTGCTCTTCAGCGAGGAGCAAAAAGAAGCCTTAAGGCTAGCCTTTGCTTTAGATCCTTACCCCAATGTAGCTACTATCGAGTTTTTGGCTCAAGAGTTGAGTTTAAGTAGTCGAACTATAACTAATTGgttCCACAATCACCGTATGAGATTAAAACAGCAAGTGCCGCACGGCATGTCACCGGATATCCCTCCAAGAGACCAAAACAGCTCACAGCAACCTTTTGATCCAGTGCAATTCCGAATTTTACTCAACCAACGACTGATGGAGTTGAGCAAAGAAAGGATGGGTTTGGCAGGAGTACCGCTGCCTTATCCACCATACCTAGCTGCCAACAGTAGTTTAGCTGCCTTAATATCCAGAGGATTGCTTCCAACAGGTGACCTGAATGACCTCACGGCTCTGAACAATGCGGTAAAGGAACAAATGAGTGGACTGGATCTGAGTATGAGTTCACTGAAGCGAGAACCAAATGAGTTTGAGGATGAGGACGATGTGGAATCGAATGTGGGATCGGAGGACTCGAACATATCAGGAAGCTTACACGACGAGACCAAACACGATGTCAATAAAGAAACCAATGTTTCTAGTGGGAACCCAAATCAAGGCAGATCTTCGAGAAGAAAACCTGCTGCTCCAATGTGGGTAAATCCCCACTGGGAGGAAGAAAAGCACTCGCAATCCAATCAAGAAAAACCACAAAATGCACAGGACGAGATCATCATCAACGGGGTATGCGTAATGCAAACAGATGATAACTACGCGCAGAGACGATCGACGTCTGAAGAAACGATTCGGATTGAACCTCAAGCTGTCTTGGATCGCTTTGAGGACGATCACAGTGAAGCCAGTAGTGTGAGCAACGATGATCACCATCACCAACGGTCTCACGACAACGAAGGTGATGTAGTTGAAGCAGACAACCAGCAATCTGACGTAAATGACACTGGTGACAGGAATAATGACAGGGATGGTGAGTGTAGTAGTAAAGAAGTAAAACAGGAAAATGCAGACGAACATTGGGAGTATTAA
- Protein Sequence
- MQPTTAANVPPSGGEMDLQAMQSMEWLFKKERIYLLAQFWQQRATLAEKEVTTLKEQLSSNNGTSNCENKDTSNMDRQSFESEMATKDKEINQLLEEVQRLQGCINKIQESSISQITRLEEQLDQKRQQIARLENRLDSQKDYDDLKRQMTILKSDLANNPDCKSIELFLENTKLQGQELKEKNQAGDSEGVADHPAQLQPPILPSTPPSNLPPPFQNVDAFGSLLGEEIVSSWRKNIETYHQKSSLSSTDGSLVIKGSTSLSETNNATEKSSTTSTPQPMDSTGYQSPHENLVVVNGNPKSPHEDNNNHHVSNNNIPLVATTFVNNFLRSDDTLKSPYRFDEHRSPFKFAEDLGMAPGSMVGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLNIA*RVHELLSIHNIGQRLFAKYILRLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAIMLLKSLIPKKGKEGSISFGRPDNDLTEDRIAHILNEANQFTQIKTESDTHSNEDSKSPHGCTSPFSKDSSLNKRLKKYENDDISQEKVVRIYQEELAKLMGRRMDEIRSPREGFPQGNVPIDRSDEIRMALDAYHRELAKINQTQASPQMPLGLLALQQQALVQHQQNQQQNQQAMQGIQATQPIGQQNSNGGVQDLSLPKDKVKLVNGIEDSKEKDEDTMSRHTGSAFSLVRPKLEPVSGPSGNSTASSPLGNSILPPMTPTSEDFTGSAAASPLQRMASITNSLISQPPSQPHHSTPQRPLKAILPPITQQQFDLYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGGYGTACSTSLSKPPNLQPTSKMLSDAAGLLTKIQQDSQNLSNSLQLGPPQVNQPPSLGPPSAAQLSQSQLLTPLGMPPHHAIALQNQDLLKKQTHALQGGHGIPTHPSIGHQSIRNMHQHISPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLQDAHNVDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSNSPGPQGAPNAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAQELSLSSRTITNWFHNHRMRLKQQVPHGMSPDIPPRDQNSSQQPFDPVQFRILLNQRLMELSKERMGLAGVPLPYPPYLAANSSLAALISRGLLPTGDLNDLTALNNAVKEQMSGLDLSMSSLKREPNEFEDEDDVESNVGSEDSNISGSLHDETKHDVNKETNVSSGNPNQGRSSRRKPAAPMWVNPHWEEEKHSQSNQEKPQNAQDEIIINGVCVMQTDDNYAQRRSTSEETIRIEPQAVLDRFEDDHSEASSVSNDDHHHQRSHDNEGDVVEADNQQSDVNDTGDRNNDRDGECSSKEVKQENADEHWEY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00443834;
- 90% Identity
- iTF_01351549;
- 80% Identity
- iTF_01351549;