Sory013887.1
Basic Information
- Insect
- Sitophilus oryzae
- Gene Symbol
- grh
- Assembly
- GCA_002938485.2
- Location
- NW:1457656-1557045[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-63 1.4e-59 200.8 0.1 29 221 720 907 704 909 0.94
Sequence Information
- Coding Sequence
- ATGACACGTAGAAGTATCGATAAAAGCTCCTCCACGCACGCATCTCCAATGGGAGAGGAAAACGGCATGATGTCTCCTCCTCCGCCTCAAGCATCTCCAGCCGAACGTTCTCCCATGAGGCTATCCTCGAATTCCCCCACGATGCTGGCTACCATGACACCTGTCAACGTCATGGAGTTAAAGAAGGAGATGGAGGAAGAAAGTGCCATGGGAAGGAACCCAGCTTACGCTCAGGTCAAAACGGAAGTCCTCTACGAAAAGGACGATGGGGAAATATATGCTCAAACCATAACAGATAAAAACGACACACCGATAGATCTGATCTACGAGGACGGGAACAAAACGGTGATATACACGACCACTCCCGATCAGAAAGGGTTGGAAATATATTCGGCTGACAATTCAGGGGAAATAACCATAAACAACATCAGCGCGCATCAGATCCACGCAGGCCAGCAGATAGCGGACGTTCTGATAGACGGGAACGCGGGAACAATGATGACGTCGAACAACGAACCCGTCAACAGCCCACCGGGAACCGTGTCTGTGGTACTGCAAGGGAACGGGCAGGGGTTGCTTCAGTACCCTCAGGCCCAAGTGCCCGGGACGACCGTTTTGGTTCTTTCGGAGCTGGTGGATGACGTAGGGGTGCCAGTTGTGGGACTGACCAGGAAACGGAAAGAGCATAGCGAGGCGTCCTCCCAGGGTACCAACGGTGATCTAGCAGTGGTGGGCCCACGTGGCATGGCAGAATTGCCAGAGGGGGCCACTCCTCCGGAAGACCAGCAGACTTGGAGAGCTTATTACGAACACCCCTTGACCGCAGCCACGACAGCCATGCTCAACATAGGAGGAGGCGCGGAAGATCAAACAGCCACCATGGGGTTGATATACGAGTACTACAAATTGCCACCCCTGCCGGCAGATTCCAAGGATAAATTAGCTGACCTTTGGCCGCCAAGCTCTCAAGCCGGAGGCATCCTAACGTCGCAACTGAAAGCGACCAATGGATTAGTGAGCGGGGCGGGGCTAGAATTGCCGACTCCGCCTTTGAGCAGTGGCGGTCAATTGAGCTCCCAAGAGTTGCAAGGTTTATTTATTAACCAACACGTTGGCTACGCACAGCCCGCGGCCACTGGCGGACAAAACTTGCAGATAGTGAAAAGGGAGCCCGAAGACCTGAGCCACCACCGGAAACTGGACTGCAGCTCGCCCAGTTCCGGAAGCCTGGACGGATCGATCATCATATCCAAGCCTCGACCGAAGGTTGTGCTGGTGTCCTCCGGAGGGGGCGGCCAGCCAGCGGACCTGGTGGTGGACGTGAACTCGATCAAGGACGAGGGTCATCGCGGTCTCAACTCGCCACAGCACGGTTCCCGTTCCATTAACGGCACACCGACATCCACCCACAGCAGTCTACTAGCAGACGGGTCCACCACGGGACCTATCGAGTTTATCTCCGCGGATGGACTCAAACCAGCTATGTACACGACACAGATATTCGCCTCCATGAGCAATGCTGGCCACAGCGGCAGCGGAACCCCATCGCCTACGCCCTACGCAGATCACGTCTCGCAATACACCCAGAGTTCTATGGGTGGAGGACCAGTGGGATCAAACTCCGCGGTCTATTCCACGTCTTCGGGCCGTCCGAGCAGTTCTGGAGCTTTCTCGGTGTCGGCAGATCCTTATTACCGCGAATACTTCACCACGGTAGCCTCGGGAGCCGGTACTCCCGAACCCGTGTATTCTGGCCAGCTGCGCCAAGGGCAGCTGGCCTACGGGGATGAAGCTGCCAACGGCGGGGCTAGCGCCAGCTTCGTGGAGCGCTATGTTCGCCAGGCTCAGTACCATGGCAAAAGCGTCATTGCTGCTGCCACGGCAGCTGGTCTCACTGTTGATCTTCCCAGCCCTGATAGTGGCATTGGTGCTGACGCCATCACACCCCGCGACCAGAACACGCTGCAACAGTCTTTTGATTATACGGAACTATGCCAGACCAATTCGACTCTTCTGGATCCTCTTTCCCTTTCACAAAGAAGCAACAGTTCCCAGTCACCTGGAGCACAACCATCAAGTCGGAGCAGGCCATGGCACGATTTCGGAAGGCAGAACGACGCTGACAAAATTCAAATTCCAAAAATATTTTCCCCTTATGGCTTTAAATACCACCTGGAATCGCCGATTTCAACATCACAAAGGAGAGAAGATGACAGAATTACGTATATCAATAAAGGACAATTTTATGGCATCACCCTGGAGTACATACCTGATCCAGATAAACAGTTAAAATCCCAAACGGTCAAAAGTATAGTCATGCTTATGTTCAGAGAAGAGAAAAGCCCTGAAGATGAAATAAAGGCCTGGCAGTTCTGGCATGGCCGGCAACACTCGGTGAAACAACGGATTTTGGACGCAGATACAAAAAACAGCGTAGGCCTGGTGGGATGTATAGAAGAGGTGTCCCACAATGCCATAGCAATTTATTGGAACCCATTGGAAAGCCCTGCCAAAATCAACATTGCCGTCCAGTGTTTGAGCACAGACTTCAGTAGTCAAAAGGGCGTTAAAGGTCTACCTCTGCACTTACAAATTGACACCTACGAAGATCCAAGAGATTCGAACATTTACCATAGAGGATATTGTCAAATTAAAGTATTCTGTGATAAGGGAGCTGAAAGAAAGACACGTGACGAAGAACGAAGAGcagcaaaaagaaaattaaCCTCCACAGGAAGAAAGAAGCTTGACGAACTCTACCATCCAATATGCGAAAGATCTGAATTCTATACCATGAGCGACCTTGCAAAGCCTCCTGTGTTATTCTCACCAGCTGAAGACATCGATAAGctTACCTCGATGGAACTTCAAGGGTTCTATTCACACGATCCTGACGGTTCCTTGACAGGACAAGATCACGTCAAGTCTGGCTCTCCTTTTCTGCTCCACACAGCATCAAAACCTCCCTCAACACCTACGTTGAAGTTCCACAATCATTTTCCACCGGACTCTGACAAGAAAGACAGCATGCTGGACGCTAGCTTAACCACTGACGGTTCGGTGTTCTCGCCGCCGATCAAGAGGGCCAAACTGATGAGTCAGGGCAGTGCTGGACCTCCGCCACTGAACGAAAGGGTTATGCTCTACGTCAGACAGGAAAATGAGGAGGTTTATACCCCCCTGCACGTCGTACCACCCACAACAAGCGGCCTGCTCAATGCTATTGAGAATAAGTACAAAATTAGCGCTTCAAGTATAAATAACTTGTatcgaaaaaacaaaaaaggCATTACGGCCAAGATTGATGACGACATGGTGGCATATTATTGTAATGAAGATTTGTTTTTGCTTGAACTTAAAGCAGTTGATGAAGACTTATACGACATAACATTCGTAGAACTTATGGAccattaa
- Protein Sequence
- MTRRSIDKSSSTHASPMGEENGMMSPPPPQASPAERSPMRLSSNSPTMLATMTPVNVMELKKEMEEESAMGRNPAYAQVKTEVLYEKDDGEIYAQTITDKNDTPIDLIYEDGNKTVIYTTTPDQKGLEIYSADNSGEITINNISAHQIHAGQQIADVLIDGNAGTMMTSNNEPVNSPPGTVSVVLQGNGQGLLQYPQAQVPGTTVLVLSELVDDVGVPVVGLTRKRKEHSEASSQGTNGDLAVVGPRGMAELPEGATPPEDQQTWRAYYEHPLTAATTAMLNIGGGAEDQTATMGLIYEYYKLPPLPADSKDKLADLWPPSSQAGGILTSQLKATNGLVSGAGLELPTPPLSSGGQLSSQELQGLFINQHVGYAQPAATGGQNLQIVKREPEDLSHHRKLDCSSPSSGSLDGSIIISKPRPKVVLVSSGGGGQPADLVVDVNSIKDEGHRGLNSPQHGSRSINGTPTSTHSSLLADGSTTGPIEFISADGLKPAMYTTQIFASMSNAGHSGSGTPSPTPYADHVSQYTQSSMGGGPVGSNSAVYSTSSGRPSSSGAFSVSADPYYREYFTTVASGAGTPEPVYSGQLRQGQLAYGDEAANGGASASFVERYVRQAQYHGKSVIAAATAAGLTVDLPSPDSGIGADAITPRDQNTLQQSFDYTELCQTNSTLLDPLSLSQRSNSSQSPGAQPSSRSRPWHDFGRQNDADKIQIPKIFSPYGFKYHLESPISTSQRREDDRITYINKGQFYGITLEYIPDPDKQLKSQTVKSIVMLMFREEKSPEDEIKAWQFWHGRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAIYWNPLESPAKINIAVQCLSTDFSSQKGVKGLPLHLQIDTYEDPRDSNIYHRGYCQIKVFCDKGAERKTRDEERRAAKRKLTSTGRKKLDELYHPICERSEFYTMSDLAKPPVLFSPAEDIDKLTSMELQGFYSHDPDGSLTGQDHVKSGSPFLLHTASKPPSTPTLKFHNHFPPDSDKKDSMLDASLTTDGSVFSPPIKRAKLMSQGSAGPPPLNERVMLYVRQENEEVYTPLHVVPPTTSGLLNAIENKYKISASSINNLYRKNKKGITAKIDDDMVAYYCNEDLFLLELKAVDEDLYDITFVELMDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01307008; iTF_01121345; iTF_01344678; iTF_00431253; iTF_00830006;
- 90% Identity
- iTF_01307008;
- 80% Identity
- -