Sory012418.1
Basic Information
- Insect
- Sitophilus oryzae
- Gene Symbol
- Ubp1
- Assembly
- GCA_002938485.2
- Location
- NW:3297461-3412425[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.13 9.6e+02 -1.5 0.1 104 138 179 209 162 242 0.50 2 2 3e-68 2.2e-64 216.5 0.2 17 221 242 442 222 444 0.91
Sequence Information
- Coding Sequence
- ATGGAGTACAAATTGTATGAGAGTTCTGACATCTTGTTGAACGAAACCACCTCCTCCAGTTCCAAAGAGTCTTGGAATTTACCGAATTGTGTCATGGACAAGGGTGAAGAGTATTTCGCTTGGGGTCAGCTGAAAATCGACGAAGACGAGTTTCAAGGCGACGGCAAGATCGGCGCGCAACGTAAGAGGAAGGCCTCGGCGGATTTGAAGGAGGACCAGAATGCCAAACAGGCCAGCTACAAAATTATCAAAGATCCGCTCAGTTTGGAGGACAAGGCTGGAGAGGCGAAGAAGATAGCGCACGTCGTTAAAGGTGCTGCTACAAGACTTTCACAGTGGGATGTAGAAGATTATGAAGACATTCAGCAAGATATTGACAGTTCTATTCATTTGGGAACCGAGTTGACACCCAATACCTATGTTAGtgaatctttattAACAATTAATGGAATGCCATCAGTATTTAAGCAAGAAACCCCGTCACCCACCATGAACGACGTGGTTCAACTGCAAATCGCTAGGCAGCAACACCATAGCCCGAATTCCACCCAGCAAGCCACCATTATGAACCCAGTAAATAGTACCGTAGAAGAAAATAGTCAGAACGCGTTCAGTAACACGCTTAATCAGTTATTCAGTCAGACATCATTAACGAACATCCATAACGTCATTGATAataacaatctatCTACCTCACCACATTTTCAAGACAACTATGGCGTTTCATCGACTAACTACGGTGTCAACGAAGACACTAGGTTTCAGTATGTATTGGCAGCTGCGACAAGCATTGCAACTAAACAAAACGAGGATACGTTGACGTATTTGAACCAGGGACAAAGTTACGAGATCAAGTTGAAGAAATTAGGCGATCTGTCCATGTACAGAGGAAAATTGCTAAGGTCAATAATACGCATTTGCTTCCACGAAAGACGCCTCCAGTTTATGGAAAAAGAACAGATGGAATCATGGCAGAAAGCTAGACCCGGAGATCGTATTTTAGAAGTAGACATTCCGCTATCGTACGGAGCTTTTGACATCGTACAGCCCGGAACAGCTTTCAACGTTATTACCTTTGTCTGGGATCCAACCAAGGAAGTTGGGGTTTACATAAAGGTCAATTGCATTAGTACGGAGTTCACACCGAAGAAACACGGCGGTGAGAAGGGTGTACCATTTCGCATCCAAGTGGAGACCTATCAGAACGAGGACAACTTGGTGGCCTCGAAGCGCCTCCACGCGGCTGCCTGTCAAATTAAAGTGTTTAAATTGAAGGGAGCGGATCGAAAACACAAACAGGACAGAGAGAAGATCATGAAACGTCCGCCCGCCGAACAAGGGAAGTACCAGGCCAGTTGCGAGTGCACCGTTTTAAGTGATATTCCCTCTGATGCTGTCCTGCAAAGCTCTCCTCTACCATCAATTACAGCATACCATCCTGTCaaaagCGGACCGGAAATTCAAAAGTCACCGATTGGCGGTCAGAACGAACCCGTCCTTGCCCAGCAAAACGTCAACCTTCAGAAAATATCTCTATGCGTCACACCGCCCAGTCCTCAGGAAAGTAAGGACGATAGTTCTAGCGCCGATGGACCAAACGAActgTCATTTGATCAGTTAAACCAGCATGGTACACCCGAAGAGACCGTGCGCTGGTTGACGGCGAATCGATTTGAAAAATACTTGGAAACGTTCTCAAGATTTTCTGGATCAGATATGCTTCGATTGTCGCGTGACGATCTCATTGACATTTGCGGACAAGCCGATGGAATTAGATTGCACAACGCTTTGCACCAAAAAGCTATAGCTCCCAAACTGAAAATATACATCTGTCAGGAAAACTCTACAGTTTTCAATGCCGTTTTTCTGTCGTCCCACAATCATATGGAACTTCTTCAAAAGCTTTGCTCCATGGTAACCATTACCTGCGATCAAGTCAAAGCCATTTATGTGGAAGGTCCCCATTCTATACATATCCAATTAAGTGACGATGTTCTTCAACACGTTGAAGAAGAGACCATGTTTTCCTTAAGTAATGCAGGAAAAAggaaattacatatttttactaaaGCGGAAAATCAAAAAGTGATGGCTGTTGTAAATATGCTTTACTATTGA
- Protein Sequence
- MEYKLYESSDILLNETTSSSSKESWNLPNCVMDKGEEYFAWGQLKIDEDEFQGDGKIGAQRKRKASADLKEDQNAKQASYKIIKDPLSLEDKAGEAKKIAHVVKGAATRLSQWDVEDYEDIQQDIDSSIHLGTELTPNTYVSESLLTINGMPSVFKQETPSPTMNDVVQLQIARQQHHSPNSTQQATIMNPVNSTVEENSQNAFSNTLNQLFSQTSLTNIHNVIDNNNLSTSPHFQDNYGVSSTNYGVNEDTRFQYVLAAATSIATKQNEDTLTYLNQGQSYEIKLKKLGDLSMYRGKLLRSIIRICFHERRLQFMEKEQMESWQKARPGDRILEVDIPLSYGAFDIVQPGTAFNVITFVWDPTKEVGVYIKVNCISTEFTPKKHGGEKGVPFRIQVETYQNEDNLVASKRLHAAACQIKVFKLKGADRKHKQDREKIMKRPPAEQGKYQASCECTVLSDIPSDAVLQSSPLPSITAYHPVKSGPEIQKSPIGGQNEPVLAQQNVNLQKISLCVTPPSPQESKDDSSSADGPNELSFDQLNQHGTPEETVRWLTANRFEKYLETFSRFSGSDMLRLSRDDLIDICGQADGIRLHNALHQKAIAPKLKIYICQENSTVFNAVFLSSHNHMELLQKLCSMVTITCDQVKAIYVEGPHSIHIQLSDDVLQHVEEETMFSLSNAGKRKLHIFTKAENQKVMAVVNMLYY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -