Sory006529.1
Basic Information
- Insect
- Sitophilus oryzae
- Gene Symbol
- Jra
- Assembly
- GCA_002938485.2
- Location
- NW:393056-394773[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.4e-16 5e-13 48.5 9.1 4 65 154 215 151 215 0.94
Sequence Information
- Coding Sequence
- ATGAGCCAGTTCAACGAAAGTAACAAACCGAACGTGTCTACAATGAAAAGGAGCCTGACATTAGATTTTAATCAAGCTAAAAAGAATTTAGCTTTTCCTTTGTCTACAGGCGAAGGGGGTCTCAGTGAGGTATTATCATCTCCTGACCTGATGAAACTGAAAGTAGATACTCCAGAGTTAGAAAACATGATTTTAGacaatcCACTACCAAATACTCCAACACCATCGTTTCCTTTTCCAAAAAATGTAACAGCTGAACAAGAAAGATTTGCTGGAGGTTTTGTTGAAGCATTAAGTAATCTTCACAACAATGGCTCACAACATGGATCTGATAGTAACACCAGCACAATTTACAATGATTCATTCATTCCACAAATCAAAGAAGAACCCCAAATTGTACCTAATATCAACAACAGTCCACCAATGTCCCCTATTGATATGGAATACCAGGAAAGAATGAAACTTGAACGAAAACGACAAAGAAACAGGCTAGCAGCATCAAAATGCAGATCACGTAAACTGGAAAGGATATCAAAATTAGAAGACAAAGTGAAAATgcttaagactgaaaatgtggAATTAGGTTCTATGGTAAATCAGTTGAAGGAAACGGTGGGCTTGTTGAAACTAGAGGTAATAGAACATAATAAGTCGGGTTGTCAGTTGATGCTGTATTGA
- Protein Sequence
- MSQFNESNKPNVSTMKRSLTLDFNQAKKNLAFPLSTGEGGLSEVLSSPDLMKLKVDTPELENMILDNPLPNTPTPSFPFPKNVTAEQERFAGGFVEALSNLHNNGSQHGSDSNTSTIYNDSFIPQIKEEPQIVPNINNSPPMSPIDMEYQERMKLERKRQRNRLAASKCRSRKLERISKLEDKVKMLKTENVELGSMVNQLKETVGLLKLEVIEHNKSGCQLMLY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01106932;
- 90% Identity
- iTF_00845623;
- 80% Identity
- -