Smos010801.1
Basic Information
- Insect
- Sitodiplosis mosellana
- Gene Symbol
- pnr
- Assembly
- GCA_009176505.1
- Location
- VUAH01000002.1:2889519-2892628[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-16 6.9e-13 48.1 4.5 1 35 446 479 446 480 0.98
Sequence Information
- Coding Sequence
- ATGCTACATGTTTCGTGCCGTGAAGCATCCGAACATACAGCCGCTGCTGCCCTTACCGAACTGCGTAACAATAACAATCATCATCTGAAGAACAAATTAATGAATGCCAGCCCGAATGCAATAGTTACCTCAATACTCAGCAAAAATCATATAGATCATTTGGAAGCGAACTCAGTATCTGTGATTCCAATCGATGCGGCCAACAAGCACAACAATAACGGTGGCAGTATTATTACGGGCGGTGGCGGAGCTGTGCCAccacaaccaccaccaccatccaATGTACAACAAGCGCCAGGCCGAATTTCGGTGAAAAAATCATTGGGCCAAATCAATGCGGCAGTTACCctaaatcaaatgaatcacaTGCATGCAACGATGCCACCCGAAGCGGCCACCGCACTCGAAATGCACCGATTAACCCAATTACAGCAGCATCTTGAAACGGCTGCCGTTCTGATGGATATCAGCAAAAAAGTGATCATCTCACCGCCCAGCTCGAATCCACAGTCGCCCGGTTTGGGTGACAGTCAGCACAACGTTAAAATGACCATTAAACGTTCGAGCGGCGATGAAATTAATTCGTCAGCAGCCAAACGCATGAAAACCAAAGGTAATAACGTAACAACAACCGTTTACCAGTTAGACACAAACACTCGACCGAGTGCCAGTGTTAAATCAGAGCCAGTATACAGTGGAGCCGATGATTCAGAAGGAAACCGTTATGACAGTGATAACGATAGCAATGACAGCGATCCGGGACGACTCGAAATGGACATTAGCTCATCGCATGACAACAACGATGATGCAAATAATGAGGCAGGCAGATGCTCATCCACACCGGTTAAATTGATCTACAAGCACAACAGAAGCTTCAACAATAATACACCGTCCGGCAGAGACACACCGGAAAGCAACAAATCAGATGACCATCGCACAGATCCAGCCACCACACAATTGTGGCAAGCATTGGCTAGATCAACCGGAAATGGCGCTGGAAATGAAGCCACACAACTATTGCGACAAATGATCACCTGCCGATCGCTCGGCTTGCCGATTCCGTCTGCTTTGAATATATCCCGCAACATGAGCGATCAACCAATCTCATTAGTTAAGAATGAGGGATCCAAATCGTCATCCGGCCGTCGAAAACAATCGTGCCCGAGCAAGGCTCCAACAGACAAACCGCTCAACAGCGATGTGCTTGCAAACATCAAAACTGAATCGAAAATGGATCCATCAAATGCCAAAGCTTGGGCCAATAATGTTGACGCAAAACCGCCAAAATCAGCGCCGATCGATAACAACCAAAGTCCGAATCAAAAAGATATGTCTTGTACCAATTGCGGAACGCTAACAACAACCATTTGGAGACGCAATCTTCGCGGCGAAATGGTGTGCAATGCATGCGGTCTCTATTTCAAATTGCACGGTGTTAATCGGCCGCATTCGATGCGCCGTGACACCATTCACACACGCCGAAGACGGCCAAAGGGCGATAAATCGGGACGCAGACGATCAAAGAATCAAGATGCCGGAAATACATCCGGTGCTGATCAATCGCCGAATGGATTTGCCGAACAACCGGATCAAAACGATTTGCAAGCACTTCAAAACCATAATCTGCTAATTGCCTTGGGCGCTGCTCAACAAGCTCCTGGTGCTCGACATTTTGCTATGCCTCCACATTTCTTTGATCCACACTTTTtgcgacaacaacaattcacCGATGCTGGCAACGATGTGCAAATTGGTGATGACAACAGTAATAATTCATCGATCAATCAGCGTCGCCGGGACGATGAGGATGATatggatgatgatgacgatgaaaatgatgcgGATTCGACAAATCTACCTCTAAATTTGGTAGCCACCCAGTTCAACGAATGA
- Protein Sequence
- MLHVSCREASEHTAAAALTELRNNNNHHLKNKLMNASPNAIVTSILSKNHIDHLEANSVSVIPIDAANKHNNNGGSIITGGGGAVPPQPPPPSNVQQAPGRISVKKSLGQINAAVTLNQMNHMHATMPPEAATALEMHRLTQLQQHLETAAVLMDISKKVIISPPSSNPQSPGLGDSQHNVKMTIKRSSGDEINSSAAKRMKTKGNNVTTTVYQLDTNTRPSASVKSEPVYSGADDSEGNRYDSDNDSNDSDPGRLEMDISSSHDNNDDANNEAGRCSSTPVKLIYKHNRSFNNNTPSGRDTPESNKSDDHRTDPATTQLWQALARSTGNGAGNEATQLLRQMITCRSLGLPIPSALNISRNMSDQPISLVKNEGSKSSSGRRKQSCPSKAPTDKPLNSDVLANIKTESKMDPSNAKAWANNVDAKPPKSAPIDNNQSPNQKDMSCTNCGTLTTTIWRRNLRGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKGDKSGRRRSKNQDAGNTSGADQSPNGFAEQPDQNDLQALQNHNLLIALGAAQQAPGARHFAMPPHFFDPHFLRQQQFTDAGNDVQIGDDNSNNSSINQRRRDDEDDMDDDDDENDADSTNLPLNLVATQFNE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01288692;
- 90% Identity
- -
- 80% Identity
- -