Smos008310.1
Basic Information
- Insect
- Sitodiplosis mosellana
- Gene Symbol
- pnr
- Assembly
- GCA_009176505.1
- Location
- VUAH01000001.1:1221589-1224663[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-18 1.1e-14 53.8 3.2 1 34 116 148 116 150 0.97 2 2 1.1e-18 4.3e-15 55.1 6.1 1 34 172 204 172 206 0.98
Sequence Information
- Coding Sequence
- ATGTTCCATTCACCAACCACGTACTCCGATATGACAGCGAGCGTTGGAAATGTGTCCGGttatcaccatcatcatcaagCGCCAAGTTCGAATTCGCCCGTTTATGTGCCATCAAATCGGGCGTTACAGCACGGCCAATACACTGGTCATGGGTCAACATTTGGTCATGCAGCAACCACACAAAATGGTTGGCAAGCCGAAAATTTCACCGCGCATAACCCACTCGCTCCACAATTTTATGGACAGAATATAATGATGGGCACATGGAGACCATACGATCCGCGTAGCTTCCAAAGTACATCACCATACGATGCGATGGATTTTACACTTGGCGAAGGACGTGAATGTGTGAATTGTGGTGCAATTTCGACACCATTGTGGCGTCGTGATGGTACTGGCCATTATTTGTGTAACGCCTGCGGTCTCTATCACAAAATGAACGGCATGAATCGTCCGCTCATCAAACCTAGCAAGCGTCTCGTTAGCACCGCAACCAGACGCTTGGGATTGTGTTGCACGAATTGTGGCACACGAACAACAACACTATGGCGACGCAACAACGAAGGTGAGCCCGTGTGTAATGCATGCGGCTTATACTTCAAACTACATGGTATAAATAGGCCGTTGGCAATGCGAAAGGATGGAATCCAAACGCGTAAACGAAAGCCCAAGAAAAATGGGAGTGGCAATTCAGCCGTTGAACTCGGTCTGAGTAAAAAAGACGACAAAGAAGATGTTAAATCGAGCCTAACGCAGAACGAATCAATGCATCTTCATTCGAAAGGCGTCCCTCAGCATTCACCAACACATCATTTGCTATCGAGCACGCCAACATCACGTTCACACTCGATCAGTTCATCTTCCACTTCATCAGCTTCGGCTATACATCATCATCCATACAGCATGCACTCGACATCGACCACCAATTCACCAACCTCACACACCAATGCACCGTCAAATCATTCGTTGATTGGACAAGCAGCGATCCCGTCCAAGTATGACTTTGGACACAACACATCGTCAGCActgcacaacacacaaacttCATCCGCAAATCTCAGTAGCAATTTAACGGCCAACACCAACTATGGCATTCATTCAACGAACAATTTGCAAACACCATTGTCCTACAGTAATGTAAAATCCGAATCAAATGCTGGCACCAATTTTGATTACATGAATAGCTGCTTACAAAATGGATACTTCAACAGCTCTTATGGTGCAATCAGTTCGTCGGCCACTGCAACACATCCAGTTTCAGATTTATCCAGTTACCATCACATTCAAGCAGCCAAATTGATGGCCACTTCTTGA
- Protein Sequence
- MFHSPTTYSDMTASVGNVSGYHHHHQAPSSNSPVYVPSNRALQHGQYTGHGSTFGHAATTQNGWQAENFTAHNPLAPQFYGQNIMMGTWRPYDPRSFQSTSPYDAMDFTLGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGINRPLAMRKDGIQTRKRKPKKNGSGNSAVELGLSKKDDKEDVKSSLTQNESMHLHSKGVPQHSPTHHLLSSTPTSRSHSISSSSTSSASAIHHHPYSMHSTSTTNSPTSHTNAPSNHSLIGQAAIPSKYDFGHNTSSALHNTQTSSANLSSNLTANTNYGIHSTNNLQTPLSYSNVKSESNAGTNFDYMNSCLQNGYFNSSYGAISSSATATHPVSDLSSYHHIQAAKLMATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01288688; iTF_00133910; iTF_00367837;
- 90% Identity
- iTF_00133910;
- 80% Identity
- -