Basic Information

Insect: Sitodiplosis mosellana
Gene Symbol: znf865
Assembly: GCA_009176505.1
Location: VUAH01000001.1:9074782-9077566[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0003 0.018 15.6 0.5 2 23 195 216 194 216 0.96

2 14 3.1 1.8e+02 3.0 2.6 1 23 229 251 229 251 0.87

3 14 0.19 12 6.8 0.6 1 23 326 349 326 349 0.93

4 14 0.00092 0.055 14.1 1.6 1 23 355 377 355 377 0.99

5 14 4 2.4e+02 2.6 0.7 2 20 382 399 381 401 0.89

6 14 3.2 1.9e+02 2.9 0.2 2 23 407 429 406 429 0.93

7 14 0.11 6.6 7.5 0.4 1 23 435 457 435 457 0.89

8 14 1e-05 0.00062 20.2 3.5 1 23 474 496 474 496 0.97

9 14 6.7e-05 0.004 17.6 0.2 1 23 502 525 502 525 0.93

10 14 0.0011 0.068 13.8 1.4 2 23 532 553 531 553 0.94

11 14 0.0052 0.31 11.7 0.1 1 23 561 583 561 583 0.98

12 14 0.00011 0.0063 17.0 2.6 1 23 592 614 592 614 0.97

13 14 6.4e-06 0.00038 20.8 2.9 1 23 620 642 620 642 0.99

14 14 6.6e-06 0.00039 20.8 0.9 1 23 648 670 648 670 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0003	0.018	15.6	0.5	2	23	195	216	194	216	0.96
2	14	3.1	1.8e+02	3.0	2.6	1	23	229	251	229	251	0.87
3	14	0.19	12	6.8	0.6	1	23	326	349	326	349	0.93
4	14	0.00092	0.055	14.1	1.6	1	23	355	377	355	377	0.99
5	14	4	2.4e+02	2.6	0.7	2	20	382	399	381	401	0.89
6	14	3.2	1.9e+02	2.9	0.2	2	23	407	429	406	429	0.93
7	14	0.11	6.6	7.5	0.4	1	23	435	457	435	457	0.89
8	14	1e-05	0.00062	20.2	3.5	1	23	474	496	474	496	0.97
9	14	6.7e-05	0.004	17.6	0.2	1	23	502	525	502	525	0.93
10	14	0.0011	0.068	13.8	1.4	2	23	532	553	531	553	0.94
11	14	0.0052	0.31	11.7	0.1	1	23	561	583	561	583	0.98
12	14	0.00011	0.0063	17.0	2.6	1	23	592	614	592	614	0.97
13	14	6.4e-06	0.00038	20.8	2.9	1	23	620	642	620	642	0.99
14	14	6.6e-06	0.00039	20.8	0.9	1	23	648	670	648	670	0.93

Sequence Information

Coding Sequence: ATGCCGAAACGATATTGTTGTGTTCAATCTTGCCCATTGTTTCGTGGCACATCGGATGGAAATGCTCGATTTTTCTGTTCGCCAAAAGATCCAGATCTTCGAGCGAAATGGGATCAAGCCATCAATAGGCCACCAATAGGCAATTTTCGTTTGTGCAGCCTGCATTTCAAAGAGGAGGATATTATATGGAAGAGCACAGGTGCAGCATTGAGATCCGGTGCCATTCCCATACCCGTCCCTGTGCCAAAGACGGAAAGTTTACCGGAGACACACGTGGAGAACGTAGAGTTAATTGATATTGCGACAATTATGAaTGCTTCAAGTACACGAAATCTTTGTCAATCGTGCTTTGATTATGATGTGAAATTACAAGCGGCTTATGCAAAGATTGCGCTCTTAGAAAAGGAAATGAGCGAATTGAGATCaagagaaaataaacgaatgcaGGCAAAGAGAATAGTCAAGAACCAAATTCGTTCCAATTCGACTCAAgacacagaaaagaaaatgtgcaGTCTTTGCCTAGTAAAATTAACAGCATTTGAACTTGAACGACATTTATGCACGGATGACGAAAACATTGTTTGCTCTTTATGTCCAACGACATTCAAATCAACAGTGAGCTTTATCAGGCACATAACGAAGCACAGCGAAATGACTCTAGCAACTAAAAACAGATTAATGTTCAAGTGCAACCAATGTAATCTTGCATATGCAATAAAAACTTTGTTGGATTGTCACAAAAAATCACACGAAGACAACCCTCCTCCGCCAGAAGAGCTTAATCTCAAAGTTGAATTCCAAGAACCGATGTCGGTTGATGAAACTTCTAATGATGACACAATTCTACCCACATCTATGCTCACTGTTGAACTAAACGAGTCGGTCGAATCAGCCCGACAATTAATCCAGCCATCAACTCAATCAAGTGCAGTGGACGAGCCTCCTAAGCCAGTGTCACAGGAcaataaattgttcAAATGTGGACTATGTGATGTGGCATTTGAGCTACCAAAGCAATTATCATGTCACGTACGTGAAAATCACGATTCAAAAGACAGTTTTCAGTGTTATTTgtgtaaatttgattttgctaCTGTCAAACAACTTTGGATGCACATGAAACGCCATGCACGAGACCAGAAATGTGACATCTGCAAAACCGAATTAACTCTCAACGAACTGAATTCACATTTGTGTGGCGATGGGAAAAGTATTCGTTGTGATTACTGTGTAGATGATTTTACGATTACATCGAAGCTGGTAGATCATTTGGAAAAGTCACATAAAAAGAGGAAAATCCATCGATGTGAAATATGTTCCAAAGTATTTTGGAGCATTGCTCTGAAGGAATTGCACATGTTGTCACACGCACAAGATGCAGCAGTATCTACACATGAACAAGATACAGCAATGCCATTTGCTTGCGACATTTGTTCGAAAGTGTTTTGtaagaaatttcaattggGTCGTCATATGAAGACGCACGATGAACAAAGACcttatCTCTGTGAAGAATGTGGCAAAGGTTTTAAATCGGCACAGAATTTACTTTTGCATAAAACTTCCATCCATTACAACGAACCAACACTTCAGTGCCCTGATTGTCCACGTAAATTTTtccgtttgtgtttgttgaaGAGCCACAGTGCCGTACATCGCAAAGATCGAGACGATAAATACGTGTGCGAAATTTGTCAAGCCGAACTTGTATCAAAAGTATCATACAAAAGCCATTTAAAAATTCACCGAAGAACAGAAGCTGATCGAAAATTTGCGTGCAAAATATGCCctatgaaatttttcaatgtaacACACTTGAAAAAACACCAGCGTGCACACACTGGCGCGAGATTATTCAAATGCCGGTTTTGTGATCAATCCTACAAATACAGCGGAGACTTGAATAAACATCTTCGGACTCATCTGGGCAATGAGATATACGAGTGTCCAAAGTGTCCGAAGCGATTCAAATACCCGAATGAGCTTCAAAAACACGAATTCGAGCATtacaaagaagaaaaggaGGCGAATCAAACGATGGAGTTAATTTAA
Protein Sequence: MPKRYCCVQSCPLFRGTSDGNARFFCSPKDPDLRAKWDQAINRPPIGNFRLCSLHFKEEDIIWKSTGAALRSGAIPIPVPVPKTESLPETHVENVELIDIATIMNASSTRNLCQSCFDYDVKLQAAYAKIALLEKEMSELRSRENKRMQAKRIVKNQIRSNSTQDTEKKMCSLCLVKLTAFELERHLCTDDENIVCSLCPTTFKSTVSFIRHITKHSEMTLATKNRLMFKCNQCNLAYAIKTLLDCHKKSHEDNPPPPEELNLKVEFQEPMSVDETSNDDTILPTSMLTVELNESVESARQLIQPSTQSSAVDEPPKPVSQDNKLFKCGLCDVAFELPKQLSCHVRENHDSKDSFQCYLCKFDFATVKQLWMHMKRHARDQKCDICKTELTLNELNSHLCGDGKSIRCDYCVDDFTITSKLVDHLEKSHKKRKIHRCEICSKVFWSIALKELHMLSHAQDAAVSTHEQDTAMPFACDICSKVFCKKFQLGRHMKTHDEQRPYLCEECGKGFKSAQNLLLHKTSIHYNEPTLQCPDCPRKFFRLCLLKSHSAVHRKDRDDKYVCEICQAELVSKVSYKSHLKIHRRTEADRKFACKICPMKFFNVTHLKKHQRAHTGARLFKCRFCDQSYKYSGDLNKHLRTHLGNEIYECPKCPKRFKYPNELQKHEFEHYKEEKEANQTMELI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01350781;
90% Identity: iTF_01350781;
80% Identity: iTF_01350781;