Basic Information

Insect: Sitodiplosis mosellana
Gene Symbol: ZBTB47
Assembly: GCA_009176505.1
Location: VUAH01000046.1:2285373-2288079[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 2e-06 0.00012 22.5 0.7 1 23 305 327 305 327 0.99

2 10 0.001 0.063 13.9 3.5 1 23 341 363 341 363 0.98

3 10 0.00022 0.013 16.0 0.1 2 23 391 413 390 413 0.95

4 10 4.7e-05 0.0028 18.1 1.6 1 23 448 471 448 471 0.97

5 10 2.6e-06 0.00016 22.1 2.0 3 23 484 504 482 504 0.94

6 10 8.5e-05 0.0051 17.3 0.7 2 23 510 531 509 531 0.94

7 10 0.00039 0.023 15.2 0.1 1 23 536 559 536 559 0.97

8 10 4.7e-05 0.0028 18.1 1.8 1 23 566 588 566 588 0.97

9 10 0.0001 0.006 17.1 2.5 1 23 594 616 594 616 0.99

10 10 0.0012 0.074 13.7 0.7 1 23 622 644 622 644 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	2e-06	0.00012	22.5	0.7	1	23	305	327	305	327	0.99
2	10	0.001	0.063	13.9	3.5	1	23	341	363	341	363	0.98
3	10	0.00022	0.013	16.0	0.1	2	23	391	413	390	413	0.95
4	10	4.7e-05	0.0028	18.1	1.6	1	23	448	471	448	471	0.97
5	10	2.6e-06	0.00016	22.1	2.0	3	23	484	504	482	504	0.94
6	10	8.5e-05	0.0051	17.3	0.7	2	23	510	531	509	531	0.94
7	10	0.00039	0.023	15.2	0.1	1	23	536	559	536	559	0.97
8	10	4.7e-05	0.0028	18.1	1.8	1	23	566	588	566	588	0.97
9	10	0.0001	0.006	17.1	2.5	1	23	594	616	594	616	0.99
10	10	0.0012	0.074	13.7	0.7	1	23	622	644	622	644	0.92

Sequence Information

Coding Sequence: ATGGCCACCTTACCGCAAACACGTCATTGTTGCATTCAATCATGCGTTAACTTCAAAGGCACAACAAGTGACAAGTTTCACTTTTTCAAGCCTTCGATGGAACGACACATTCTAGATAAGTGGAAAGAAGCGATAAGCCATCATCAAGAGGTCAAAAATATAACATTCGTATGCAATTTACACTTCGAACGCGAATCAATGATTGAAATGGACGGACATCTGTTCCTAAAACATGGATCAATACCAAGCATTTTCGGCATTAATCCACCAACCGATTCagaaatcgaaaatgaagagaTGGCTGTGAAAATGGAGCCGATTAGTACTGAGACCCCAAATACAGTTCAATTAGTCAACATCAATCGAATAATACAGAATACATCAACGTTTTGTGATGCACCAACAGAGATAGATGAACAGATCGACAATGTAGACTCAGTTGAATGCAATGGTTGTTACAGACGCAATgacaaaattcaatgtttgttgGCGAACATTGAGAAACTGAAGAAGTCACAAGAACAAAAGAGAAAGCTGATTTGTTACTGGAAATCTCTCGCCGTGTATTATAAACGCGGAAACAGAGAGCCGATTGTGGTTAGAGTtaacaaattgaaagagaaatttaAAATAACCCAAACTAAACCCAGGAAGCGGGTCAAACCAGTCAGTATTTCTAACAAAATTCTCGCCACGGAATTGATCAAAGTTGAAGGAAAGCCGACGGGACCAAAGGACGATGAAACGAACACACTATTCGAGCCAGAAACAACCACAATAGAACTAAATGAAGACGAAAAAGTTGAACATGATGATAAAGTTGAACCAGTTGAAGAAGTTGAAGAAGTTGAACAGGTTGATATCACATTGAAAAAGTCGGATGCCGAAATACTGAATTCCCTCCTCAAACCATACAAATGTGGGAAATGTGACGAAACTTTTGAAAAACCCACTGAACTGTCACGTCACctgaacacacacagagaacgCATACCGCCTAAGCCGACTATCAAGAAAACCTACGAATGTTACATTTGCAAAAGAGAATTCAAATTGTCGTGTAGCATTCAAAGACATATGAAAGTGCACATCGAAAGTAACGAAAAGTGTGATGTTTGCCGATCTGAGGTGACAGCTGATCAACATCTTTGCATCGAAGAGGAGAACATTTCTTGTGAATATTGTCCTCAGACATTTGTTTCAACCAAAAACCTGTTGGAGCATTTGGAGAGTGCGCATAGCGAGAAAAAGTTACACAAGTGCCTCAAATGCCATCAATATTTCCGGAtgatgtttttgaaaattatacaCGAACGAAACCATGATATCATCACCAAACCATTCCATTGTGAGGTGTGTCCGAAATCATTCTCAATTCGAGATTCGCTTATGAATCACCGGCAAAGGGAACATGCAAATCAAGAAGAACCCAAAAAACACAGTCATTTGTGCGATCAATGTGGCAAAAAATTTGTTAGACAATCCCAATTAAAGAATCACTTGCTCTGGCATTCAGAGCCCACAATCAAATGCCCTGACTGTCCGCAACTCTTTCGTACGAGATATACTCTGAAGAGACACAGTTACATACATCGTAATGACATATTcgtttgttcaatttgtgGAGTAGAGCTATCATCACCGTATGGCATGAAAGATCACATGAGATATATACATGGTCCAATGAAAAGtttattcaaatgcaaaatctGTGCAAAGCTGTTCAAGTATAAATACGATCTTCAGAAACACGTCAATGCACATGCAACAGGCAAAGGTTTTCAGTGtacattttgcacaaattcATACAAGTACAGAGGTGATTTGAACAAGCATCTGAGAATTCATCTTGGAGGAAAAATTTATGAGTGTAAAGAGTGTAATGAACGTTTTAGATTGCCCTTGGAACTGCAGAAACATTCCTTTGAGCATTACAAAGAGCAACAGATGACCGCCAACATTACAACAGAGGAATAA
Protein Sequence: MATLPQTRHCCIQSCVNFKGTTSDKFHFFKPSMERHILDKWKEAISHHQEVKNITFVCNLHFERESMIEMDGHLFLKHGSIPSIFGINPPTDSEIENEEMAVKMEPISTETPNTVQLVNINRIIQNTSTFCDAPTEIDEQIDNVDSVECNGCYRRNDKIQCLLANIEKLKKSQEQKRKLICYWKSLAVYYKRGNREPIVVRVNKLKEKFKITQTKPRKRVKPVSISNKILATELIKVEGKPTGPKDDETNTLFEPETTTIELNEDEKVEHDDKVEPVEEVEEVEQVDITLKKSDAEILNSLLKPYKCGKCDETFEKPTELSRHLNTHRERIPPKPTIKKTYECYICKREFKLSCSIQRHMKVHIESNEKCDVCRSEVTADQHLCIEEENISCEYCPQTFVSTKNLLEHLESAHSEKKLHKCLKCHQYFRMMFLKIIHERNHDIITKPFHCEVCPKSFSIRDSLMNHRQREHANQEEPKKHSHLCDQCGKKFVRQSQLKNHLLWHSEPTIKCPDCPQLFRTRYTLKRHSYIHRNDIFVCSICGVELSSPYGMKDHMRYIHGPMKSLFKCKICAKLFKYKYDLQKHVNAHATGKGFQCTFCTNSYKYRGDLNKHLRIHLGGKIYECKECNERFRLPLELQKHSFEHYKEQQMTANITTEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -