Basic Information

Insect: Sitodiplosis mosellana
Gene Symbol: HINFP
Assembly: GCA_009176505.1
Location: VUAH01006166.1:1222438-1225291[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0011 0.064 13.9 1.2 2 23 248 270 247 270 0.96

2 10 0.00012 0.0074 16.8 0.3 1 23 276 298 276 298 0.98

3 10 1.4e-05 0.00084 19.8 2.3 1 23 304 327 304 327 0.98

4 10 0.39 23 5.8 1.8 1 23 333 362 333 362 0.91

5 10 4.2e-05 0.0025 18.3 3.9 1 23 368 390 368 390 0.98

6 10 7.7e-05 0.0046 17.5 1.4 1 23 396 418 396 418 0.99

7 10 3.5e-07 2.1e-05 24.8 0.5 1 23 424 448 424 448 0.97

8 10 8.9e-06 0.00053 20.4 0.5 1 23 454 476 454 476 0.99

9 10 1.6e-05 0.00096 19.6 5.2 1 23 482 506 482 506 0.99

10 10 0.00089 0.053 14.1 1.3 1 23 512 536 512 536 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0011	0.064	13.9	1.2	2	23	248	270	247	270	0.96
2	10	0.00012	0.0074	16.8	0.3	1	23	276	298	276	298	0.98
3	10	1.4e-05	0.00084	19.8	2.3	1	23	304	327	304	327	0.98
4	10	0.39	23	5.8	1.8	1	23	333	362	333	362	0.91
5	10	4.2e-05	0.0025	18.3	3.9	1	23	368	390	368	390	0.98
6	10	7.7e-05	0.0046	17.5	1.4	1	23	396	418	396	418	0.99
7	10	3.5e-07	2.1e-05	24.8	0.5	1	23	424	448	424	448	0.97
8	10	8.9e-06	0.00053	20.4	0.5	1	23	454	476	454	476	0.99
9	10	1.6e-05	0.00096	19.6	5.2	1	23	482	506	482	506	0.99
10	10	0.00089	0.053	14.1	1.3	1	23	512	536	512	536	0.98

Sequence Information

Coding Sequence: atggattcattttaCCCAAAATTTGATGAAGTGGAATTGGTTTTAGTTGATGACGATAATGATTTTTACGATCCATTGGAAaccaatttcgaaaatgaagaTATAAATGAAGATAcgaaattgcaattgaatgaTACTGTGCACGAGGAAAGCCAATTCCATTGGAGTACTGACGAAATGACAAACCATTCATCTGAGGATGAAAACAGTACCATAGAACATCCAAAAACTGTAAAACAAGACTCTTCTTGTGAAAACTATGATTATTTTTGCGACGATACCTCGTATCATGTGGAAAAGATTGATGAACCTAATGAAAAAAGCAATCATTCAACGGGACAAGAGAATTTCCAAAACAACGATTCCTATTATTCCTCAGACATACCAATCATTGAATTCAAACCTAAGCCAGATGAAATTCTCAAAGCTGGCAATGCACAAGAACTCAATGAAATGatatcgaataaaattgaacaaaaaatcgatacCAAGAAAGATGTTCtacaaagagaaaatattcaaacggAAAGGCAGGATCGCTtgaaaaataagcaaaaaaaagacgaaattgTGACGGTGagcacacgaaaaaataaaaagcagctcaagacgaagaaaaaatggccAAAGGAAGAGAAAGTGATGGAAAGattggaagagaaaaagacaagAAACTATAGTAGAAGAAATGAGATTCCAAAGGATGTAGTGCACAATGAAGCGTACGATAAAAAGCTGCTAAACTGCAAAATATGTAATattcagtttgaaaaatcCCCATTCTTCACCGAACACATGCGTACAAAGCATTCTATTGATAAGCCATTTGAGTGTTTTATTTGCTCTAAAGCATATCGAATCAGTAGTCTCTTGGCTGAACATATTAGATATCATTTTGGAGAAAAACCTTATAAGTGTAAATTTTGCGATCGCAGCTTCAGCCAATTACAGCCGTATAAGGCACATATTAGAAAATCACATACTCTTGAGCGTCCATacaaatgtaatttcatctacgaaaacaatttaaaatgtgaaGAGTCATTCTACGATACCAAAACATTTAAGTTTCATATGAGAGAGCATACTAATGAGCAACCATTCACCTGTAAATTTTGTGCGAAAAAGTTTAATCATTCTGGAACTTATCAAGCACATATGAGaATTCACACGAATGAGCGGCCATATCAATGCGTACAATGTGGTAAATCCTTTGCACAAATTAGCACTCACAAAGCGCATATGCTGACGCACAGTGCTGAGTTCAAATTCCCATGCACTGAACTTGGTTGtgataaaaaattcaaacaagCCACTAACCTGAAACTCCATATGCGCGTGCACACAAAAGAAACACCATACAAATGtGAGGAGTGTGGACGGGGCTTTGCACAATTAGTAACATATCGAAATCATAAACGAATTCACACTGGGGAAAAACCGTTTCAATGCACATACATAGACTGTGGTAAATTTTTTCGGCATCGTAATAGTTATCGACGTCATTTGCAAACACACACGGGCGAAAAGCCATTTCAGTGTACAATCGATGGTTGCTTCAAACGATTGAGCCAGATGTCATCGTTTGTATCGCATATGAGAAGACATACAAAAACCGGAAAAAGTTGA
Protein Sequence: MDSFYPKFDEVELVLVDDDNDFYDPLETNFENEDINEDTKLQLNDTVHEESQFHWSTDEMTNHSSEDENSTIEHPKTVKQDSSCENYDYFCDDTSYHVEKIDEPNEKSNHSTGQENFQNNDSYYSSDIPIIEFKPKPDEILKAGNAQELNEMISNKIEQKIDTKKDVLQRENIQTERQDRLKNKQKKDEIVTVSTRKNKKQLKTKKKWPKEEKVMERLEEKKTRNYSRRNEIPKDVVHNEAYDKKLLNCKICNIQFEKSPFFTEHMRTKHSIDKPFECFICSKAYRISSLLAEHIRYHFGEKPYKCKFCDRSFSQLQPYKAHIRKSHTLERPYKCNFIYENNLKCEESFYDTKTFKFHMREHTNEQPFTCKFCAKKFNHSGTYQAHMRIHTNERPYQCVQCGKSFAQISTHKAHMLTHSAEFKFPCTELGCDKKFKQATNLKLHMRVHTKETPYKCEECGRGFAQLVTYRNHKRIHTGEKPFQCTYIDCGKFFRHRNSYRRHLQTHTGEKPFQCTIDGCFKRLSQMSSFVSHMRRHTKTGKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -