Basic Information

Insect: Sitodiplosis mosellana
Gene Symbol: ZFX_1
Assembly: GCA_009176505.1
Location: VUAH01000003.1:9391969-9394233[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 5.4e-06 0.00032 21.1 3.4 1 23 202 224 202 224 0.98

2 15 0.00038 0.022 15.3 4.0 1 23 230 253 230 253 0.96

3 15 4e-05 0.0024 18.3 3.3 2 23 270 291 270 291 0.95

4 15 1.1e-05 0.00069 20.1 1.3 1 23 297 320 297 320 0.96

5 15 2.3e-06 0.00014 22.3 3.0 1 23 326 348 326 348 0.98

6 15 8.2e-06 0.00049 20.5 0.5 6 23 358 375 355 375 0.96

7 15 6.4e-07 3.8e-05 24.0 1.1 1 23 381 403 381 403 0.99

8 15 0.00062 0.037 14.6 5.5 1 23 409 431 409 431 0.98

9 15 0.016 0.97 10.1 11.5 1 23 437 461 437 461 0.98

10 15 1.4e-06 8.7e-05 22.9 1.0 1 23 467 489 467 489 0.98

11 15 1.1e-06 6.7e-05 23.2 3.1 1 23 495 518 495 518 0.98

12 15 0.00018 0.011 16.3 1.6 3 23 532 552 531 552 0.98

13 15 0.00057 0.034 14.7 9.5 1 23 558 580 558 580 0.99

14 15 2.2e-05 0.0013 19.2 3.1 1 23 586 608 586 608 0.99

15 15 0.0019 0.11 13.1 3.4 1 23 614 636 614 636 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	5.4e-06	0.00032	21.1	3.4	1	23	202	224	202	224	0.98
2	15	0.00038	0.022	15.3	4.0	1	23	230	253	230	253	0.96
3	15	4e-05	0.0024	18.3	3.3	2	23	270	291	270	291	0.95
4	15	1.1e-05	0.00069	20.1	1.3	1	23	297	320	297	320	0.96
5	15	2.3e-06	0.00014	22.3	3.0	1	23	326	348	326	348	0.98
6	15	8.2e-06	0.00049	20.5	0.5	6	23	358	375	355	375	0.96
7	15	6.4e-07	3.8e-05	24.0	1.1	1	23	381	403	381	403	0.99
8	15	0.00062	0.037	14.6	5.5	1	23	409	431	409	431	0.98
9	15	0.016	0.97	10.1	11.5	1	23	437	461	437	461	0.98
10	15	1.4e-06	8.7e-05	22.9	1.0	1	23	467	489	467	489	0.98
11	15	1.1e-06	6.7e-05	23.2	3.1	1	23	495	518	495	518	0.98
12	15	0.00018	0.011	16.3	1.6	3	23	532	552	531	552	0.98
13	15	0.00057	0.034	14.7	9.5	1	23	558	580	558	580	0.99
14	15	2.2e-05	0.0013	19.2	3.1	1	23	586	608	586	608	0.99
15	15	0.0019	0.11	13.1	3.4	1	23	614	636	614	636	0.98

Sequence Information

Coding Sequence: ATGGATAAAAACTGCCAAATAGCAAAAGAGAAATGCCAACCAGAGTTTGTGGCGTGTCACAACAATGATGATGTCGAGTTAGCTTGCGATCCATTTGCTGATAGCCAATGTCTTTTGCCGGTGAAAGTGGAGTATGTTGAACCGTGCTTCGAGGACTTTAACGTGAATGAAGTGACCGTAGTTCAAATCAAAGAGGATAGACCTGACGAGGATTCTGATCATAATGATGACTATGGATACGACACATTCGACCGAGATGAGGATATTTCGTACGATTATGAAGATGAACCATTAGCACCGCTATCGTCCAAAACGGAATTTAAAGCATTAAATGTTAAAAGTAGTACAGAAGACTTTGGCACAGATTGGTCGTCGGCAGTCGTTATCAAAAATAACGATGACGTCAAGGATGAGGAGAAAGTCAATATTGAAACCGACGTTGAACCAGAAGCcaatgtaaagaaaaaagcaaaagtgaaagaaaaagagacgaCAAAAGATAAGAGACCATCCGAAGttaatgaaaagaaatcacTAAAGAAAACGACTGATCCAACAAAGGGGAGCGGTAAAAAGAAAGGTCGGCCTAAATCACAAGAGGAACACAAATGTAAATTTTGTGGCAAAAGCTATGCGTACGCAAGTTTATTGAAGCTACACACTCGAACACACATGATAGACAAAGGTCACAATTGTCCAGTGTGTGAAAAATCGTTTGCTCGAGCCGATCATTGTAAACAACATATTAACACAGTGCACAAAGGTGAAGTGATCGATGGTGTCGTACGAAAGCCGAGCTTTGAGCGAACATGTGATATTTGCAGCAAAGTTTTCCATCATTCCGGCAATTTACGGAAACATATGGTTCTTCACACGGGCGAACGGCCATTTAGTTGCGCCGAGTGTGGCCGAACATTTGTATTGAATCAACATTTAAAGTCTCACATGAAATTGGTGCATTCCGATGAGAAATCGTTCCAGTGTTCAATATGCGGCAAATTATTTAATCATAGTGGCAATTACAAGAAGCATTTGAAAGTGCACAGTGGAGAACGGCCATTCAAGTGTTTCTGTGGCAAAGCATTCGCACAGTCGAGCAACTATCAGGCGCATATGCGAGTGCACATGAACGATAGACCGTTTAAATGTGATCAATGCGATAAATCATTTGtgcaatcaatcaatttgacCTTGCACAAACGTGTGCATACTGGTGAAAAACCCTTTGAATGCGATCAATGTCAACGAAAATTCCGTCGAAAATCGCAATGCATGTCCCATATGAAAGTGCATAATAGCAATAAAAGGTTCAAATGTAGCCATAGCCATTGTCCCCGGGCATTTACGCATCACACGCATTTGCgaattcatgaaaaaactcACACGATGGTTCCAAAGTTTAAATGCCCCGAATGTGATAAAGCATTCATTTACAATCATCTACTCGTTACACATCTTCGTCTCCATACTGGAGAACGACCGTATAAATGCGGCGAATGCAACACTCGATTTACATCGACATCACAATTGAAACGTCACAGGAGAATGCAACACGAAGAATATAAACCGGAGATAGAGGATAAGCCACAAGCCTGTTCAGTGTGTCATAAAACATTCGGAGGCAAGCGATTGTTGAGCAATCACATGAAAATCCATTCGGGAATTAAACCATTTAAATGTGACTACtgcgaaaaatgtttcatcacGCACAGCGATTGTAAAAAGCACATGCGAATTCATACGGGCGAGAAGCCCTATCAATGTGAAATGTGTCAAAAACAGTTTACATTCTCGAATAGCTATCGCATTCATATGCGTAATCATTTAGgagaaaaaccatttcaatgtCAATATTGTGGCAAAGCATTCTCTTGTTCAAGCGATCGCGGCAAACACGTTAAAACGCACACAAATCAAAAGACGGCATTCTCAAATAGTCGATAA
Protein Sequence: MDKNCQIAKEKCQPEFVACHNNDDVELACDPFADSQCLLPVKVEYVEPCFEDFNVNEVTVVQIKEDRPDEDSDHNDDYGYDTFDRDEDISYDYEDEPLAPLSSKTEFKALNVKSSTEDFGTDWSSAVVIKNNDDVKDEEKVNIETDVEPEANVKKKAKVKEKETTKDKRPSEVNEKKSLKKTTDPTKGSGKKKGRPKSQEEHKCKFCGKSYAYASLLKLHTRTHMIDKGHNCPVCEKSFARADHCKQHINTVHKGEVIDGVVRKPSFERTCDICSKVFHHSGNLRKHMVLHTGERPFSCAECGRTFVLNQHLKSHMKLVHSDEKSFQCSICGKLFNHSGNYKKHLKVHSGERPFKCFCGKAFAQSSNYQAHMRVHMNDRPFKCDQCDKSFVQSINLTLHKRVHTGEKPFECDQCQRKFRRKSQCMSHMKVHNSNKRFKCSHSHCPRAFTHHTHLRIHEKTHTMVPKFKCPECDKAFIYNHLLVTHLRLHTGERPYKCGECNTRFTSTSQLKRHRRMQHEEYKPEIEDKPQACSVCHKTFGGKRLLSNHMKIHSGIKPFKCDYCEKCFITHSDCKKHMRIHTGEKPYQCEMCQKQFTFSNSYRIHMRNHLGEKPFQCQYCGKAFSCSSDRGKHVKTHTNQKTAFSNSR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -