Smos003572.1
Basic Information
- Insect
- Sitodiplosis mosellana
- Gene Symbol
- CAMTA1
- Assembly
- GCA_009176505.1
- Location
- VUAH01006169.1:1842550-1859998[-]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-35 4.2e-31 107.2 1.5 40 116 2 76 1 76 0.97 2 2 0.35 6.9e+03 -3.1 0.0 15 45 425 454 416 501 0.65
Sequence Information
- Coding Sequence
- ATGCTATTGTATTCGCGGAAAAAAGTGCGGTATCGACGTGACGGCTACTGCTGGAAGAAGCGAAAGGATGGCAAAACTACACGAGAGGATCACATGAAATTGAAAGTTCAAGGAACAGAAtGCATCTACGGCTGCTACGTACACTCGGCCATTCTGCCAACCTTTCATCGCAGGTGCTACTGGTTGTTACAGAATCCCGACATTGTTCTGGTTCATTATTTGAACGTGCCCTATCCAGATGATAACAAAATGGCTGTTATAACCCCAAGTTTGGCATTATGGGGAGACAAAAAGGAGTGGACTAAAGAGGAATTGGTTTGCCAGCTGAAGCCAATGTTTTTTAGCGAGGATGAACCGGATGCAACtaacgaaattgaaatcactACGGCCGAAACGGTTGAAGCGATAGTTGCTCAATTGATGGAAAAGCAACGAGCAGCACGACAAGCGGCACTGGTCAAGCAATTGGAATGTGGTTGTCCAGATTCAACATGTGCCGATGGCAAATCTTGTTCGCATCCAATGCGACGGTTGAGCTCCAACAAAACAACCGTAAACGATAAACAACGTcatgttgaaaataataataatcatgtATCGAGCACCACACCAAATGTGCTCATCGGAACAAGACTCTATTCACGATGGGTTGATCGTCGAGGTCGTGATCAATTAACTGAAATCAGTAATCCAAATAATACAACAACGATGCATCAGCTCCCCAATAACAATGGCAATTGTAATTCAGCAATCAAAGATATTGAATCGAATAattcgatacattttcaaGTCATTCCAACGACCGATACCACGTCTTCGGTGAATTCGTCAGCTGGTTCGGCAAGCAATTTAAACAATAATACTCGTCTGTTGAACAGCAATAATGGCACTTTAACACTGACATCGTCAGCGGTTGCGTCGACGGTGGCCGCATCGTTAGCCAAGACATCGACATCGACAACTGCATCGACTGCATTGGGCAAAAGTGCAGCcactttgaattttaatcaaacGGCCGATAATCAAATTGTCGCGACCACAAATAgtagcaataacaacaacagcaacagcaacgccACCAATGCCAATCACAATCAAAGCAATCAAATGGATAATGGACAAACGAACAATATACACCATCAAAGTATCGTGAATCATGGAAGAACGGCAACAACCGCAGCTAATCACATGGTTAATGCGCCAATCGTTACATCGACACCTCCTCTAGTATTGAGTTTGTCACAGATTCAAAGTTCATCGGGCAGTTTATTCATACTGAATGGCCAGCAGCAGTCGTTTATGTGTCAATCCTCGAGTCAGTATACCCATCAGCATGGAACGCATCATTTGGCGGGCAAAGCgagtaaaaatgaatatcatcGTGAGAATATGGTGTCACTTGGGCCAAAGCTGGAGACAATGGATGCATCGGTGTCACAATTTACATCAAAAATCCATGGAAACAATACGTATTTGAATGTCAGTTATGCGGCTCAATCAAATGCCACCACGATTATGAAAGATAATTCGGTGGTGGATCTACCGCACACCGATTCGATGGCATTCTTCAACGAAACACTTGAACTATCGCAAGAGGATATTCAGAAAACATTAAGTGCCAATATGCCGATGAATCCAAATGGAACGAATGCCCGAAACACAACGACCCTAAATGATACAACGATCCGAGAGCCCACATTGCATGCCGCTGATTTCATTGACGATTGCTGTGATGAAGGTAATATTGATGTGGTTCCATCGTCGGTGCACGATGACGACGTGTTTGTCAATTTGGATGCGTTCGATATGTTTGTCGAATTCCCGGAATTGGATTTGGATGCAAAGGCCTCGTTGAGCTGTCCCACCGACAGCAACATCATCGATATGGTTAGTGATGATGTAACCGATCCCATTCAATTGAGACAAACACATGAATCGGAATCCAGTTCGCGGCTTCTATCGAATGATGTCGATAATCCGAATGGAATCAACGATGATGCACAGCAAACATCACAATTTACCGCCACCGCCGTTCAATTGAGTGATTCGGAATCACGTGCTGATCTCTTTAATATCTCGGATTTCAGCCCCGAATGGGCATATCCAGAAGGTGGCATCAAAGTACTGGTCACTGGGCCATGGAATCAAAACTCAAACTATACCGTTCTGTTTGATTCATTTCCGGTGCCAACGACCATTGTTCAAAGTGGCGTACTTCGGTGCTATTGCCCGGCTCATGAGGTTGGTTTAGTCACATTGCAAGTGGCATCCAATGGTTATGTCATATCGAACTCATGCATTTTTGAATACAAATCACCGATGAACGCCGAAAATGGAGCCGCCTGCGATGGCACAACCAATGTGTCCAACAATGGTGACAGCCTATACAAATACACACTGTTCAATCGATTGGAATCGATCGAAGAACgtatgcaaatcaaaatggagcCATCCGACTCGACGGACGAGAGCAGTACATCGAATCGCATTGATTTCGAAGATCATTTGGTCAATTACTGTCAATCGCTGGCAACGAAACAGTGGCGCTCTTCGACTGAGGCGATATTTTGGACGAAAAGTGATAGCGTGAAAGGAATGTCACTGTTGCATTTGGCAGCCAGCTTAGGCTATTCACGCCTAGTCAGCACATTGCTTCTGTGGCGATCAGAGAATACAAACGCGGTTTTAGACACTGAAATCGATGCGCTTAGCCAAGACAATGAAGGATTCACCCCTTTGgtatGTCATTATGATACGGCGATTTTACTTTGCAAATGGAACTCAAACGCTTTGGAAGTGAAAAACTATCGAAAACAAAGTCCAGTCACAGTTGCCATTGAAAATggTTTCATTGATCTGGGCGAAGAGTTGcttcaatttgaaacgaatCGAAAGGAGTCGTCAATTTCGTCggcaattgaatttaatcgtTCGTTTATGCAGTCGATgttcaagagtgaaaaatgtgaacTGGATGACAATAAGAAAGGATTGACGGAAATAATAAATGACATTGAAAAAGGAGAGTATCTCAAAAGTTTAACACCGACATCGTTCAGTCAGTCAAACGAGTACTTGGAATCGGTTCTGTCGCCAAAATCGGTAGAATCCCAAACCAGTTGCCGCAGCCATGACGGCGTCTTTCTTCGGCCTGGTGAACAGCAGAAGAAAAGTTTAAGTTCACCAATTTCCTCGCTGTCAGGAAATTTGCCAACAATGACCAGTTTGTTGTCGCATCGCCTAATCAAGCGCACTTCCGTCGACAGTGGAATCAATTTAGACTTTCCGATTCCATCGTTTAGATCGTCATTATGGAGCCGATCGCGAAATTTGTCCAGTCAAACATCGTTAGCCGCAACGGTCAGCGGTTTTGATGCAAACGACTCATTTTTACTATCATTAGGCGAGGAAACGGCTACAGCAAAACCACAGCAACCCATTTCCTTGGACGAATTGAATCagcatttggtgaacgatGATCGGTCCAGCGTCGCAGACAATCCCATCGATGCCAATACTTCCAATAATGGCGATACAAATGTTGTGATGCAAGAAACGGTCGGCGGCATCGTTCAAGCCACCTTGTCTTCATACCATTTCTTGACCAACCCAAATCCACCTCTCCGCCCCTTCATCGCCTACCCGACAGCCTTATGGGATTCGGATGCAAAAGTGTTAACACTTGCCGAGCAAATAATCGCTGCGATGCCGGAGCGCATAAAGAACGAGTCCGATGACATAATGTCGTTGGGCAGCCCATTGTCGGACACATTCAATTCGGATACGTCGGGTTTGGGTGGTTTGAGTGATGCATTCATGGAACCTTTGCTGGACTCATTGCCAAGCAGCAATTTTGATCAGGAtctcaattttgaattgaacgacTATCGTTATCATGATGTTGGTACACCATGCTCTAGCCTGAGCCCAGCTAGCTCAGGTCCACTGCAAAGTCCGGCCAGCTATTCCATAACAACCGAACCGTCGATTAGCACGGGTGCAATGAGCTCACCGTCACCACCGCCCACTACCGAGGATTTTACGGAATTTTTGCATGCATCCAGCACCATACTCAAGCCATTCGAAGCCGATTTCTCCAATTTAACACTGACTGATCGCGAACAACGTGAACTGTACGAAGCAGCtaaatgcattcaaaaagCCTATCGATCCTATAAGGGACGCAAGAAACTCGAAGAGCAAGACAAAGAGCGACGCGCTGCCATTGTCATACAAAATTATTATCGACGATACAAACAGTACGCGTACTATCGTCAAATGACAAACGCTGCGCTCATCATTCAGAACGGTTATCGTTCGTATTGTGAACACAAACGCTTCAAGAAATCAACACAGCCGAAGGGCGGAACTGGCAACACGGCTACCTTATCGTCCACACGGAATAACACACAATGCTTGCAGAATTATTACAACAAAAGATggaaacaacagcagcagcatcagtcCAACAGTGGCGCTTTAAATAACACCAACATTTCCAAAGAGCCAAACACATCTGGCCCACTCAAACGTACCTATTCGCAACGAACTCAAAATCAAGCAGCAAGAAAAATTCAGCAATTCATGAGACAATCCAAAATGAAACTACAGAAAGAACGAGCCGAAAAAGAGAAGCTGGTGCTCCAACAACGGGTGGAATACCATCAAAACTTGCCGTTTCATCCGCATCCCATGTAA
- Protein Sequence
- MLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVITPSLALWGDKKEWTKEELVCQLKPMFFSEDEPDATNEIEITTAETVEAIVAQLMEKQRAARQAALVKQLECGCPDSTCADGKSCSHPMRRLSSNKTTVNDKQRHVENNNNHVSSTTPNVLIGTRLYSRWVDRRGRDQLTEISNPNNTTTMHQLPNNNGNCNSAIKDIESNNSIHFQVIPTTDTTSSVNSSAGSASNLNNNTRLLNSNNGTLTLTSSAVASTVAASLAKTSTSTTASTALGKSAATLNFNQTADNQIVATTNSSNNNNSNSNATNANHNQSNQMDNGQTNNIHHQSIVNHGRTATTAANHMVNAPIVTSTPPLVLSLSQIQSSSGSLFILNGQQQSFMCQSSSQYTHQHGTHHLAGKASKNEYHRENMVSLGPKLETMDASVSQFTSKIHGNNTYLNVSYAAQSNATTIMKDNSVVDLPHTDSMAFFNETLELSQEDIQKTLSANMPMNPNGTNARNTTTLNDTTIREPTLHAADFIDDCCDEGNIDVVPSSVHDDDVFVNLDAFDMFVEFPELDLDAKASLSCPTDSNIIDMVSDDVTDPIQLRQTHESESSSRLLSNDVDNPNGINDDAQQTSQFTATAVQLSDSESRADLFNISDFSPEWAYPEGGIKVLVTGPWNQNSNYTVLFDSFPVPTTIVQSGVLRCYCPAHEVGLVTLQVASNGYVISNSCIFEYKSPMNAENGAACDGTTNVSNNGDSLYKYTLFNRLESIEERMQIKMEPSDSTDESSTSNRIDFEDHLVNYCQSLATKQWRSSTEAIFWTKSDSVKGMSLLHLAASLGYSRLVSTLLLWRSENTNAVLDTEIDALSQDNEGFTPLVCHYDTAILLCKWNSNALEVKNYRKQSPVTVAIENGFIDLGEELLQFETNRKESSISSAIEFNRSFMQSMFKSEKCELDDNKKGLTEIINDIEKGEYLKSLTPTSFSQSNEYLESVLSPKSVESQTSCRSHDGVFLRPGEQQKKSLSSPISSLSGNLPTMTSLLSHRLIKRTSVDSGINLDFPIPSFRSSLWSRSRNLSSQTSLAATVSGFDANDSFLLSLGEETATAKPQQPISLDELNQHLVNDDRSSVADNPIDANTSNNGDTNVVMQETVGGIVQATLSSYHFLTNPNPPLRPFIAYPTALWDSDAKVLTLAEQIIAAMPERIKNESDDIMSLGSPLSDTFNSDTSGLGGLSDAFMEPLLDSLPSSNFDQDLNFELNDYRYHDVGTPCSSLSPASSGPLQSPASYSITTEPSISTGAMSSPSPPPTTEDFTEFLHASSTILKPFEADFSNLTLTDREQRELYEAAKCIQKAYRSYKGRKKLEEQDKERRAAIVIQNYYRRYKQYAYYRQMTNAALIIQNGYRSYCEHKRFKKSTQPKGGTGNTATLSSTRNNTQCLQNYYNKRWKQQQQHQSNSGALNNTNISKEPNTSGPLKRTYSQRTQNQAARKIQQFMRQSKMKLQKERAEKEKLVLQQRVEYHQNLPFHPHPM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01288126;
- 90% Identity
- -
- 80% Identity
- -