Smos013157.1
Basic Information
- Insect
- Sitodiplosis mosellana
- Gene Symbol
- Znf541
- Assembly
- GCA_009176505.1
- Location
- VUAH01006225.1:10025486-10034989[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.017 24 5.3 0.1 7 43 1178 1213 1177 1213 0.94 2 2 3.7e-12 5.2e-09 36.2 0.1 2 46 1210 1254 1209 1254 0.96
Sequence Information
- Coding Sequence
- ATGGCTGCAGTAAATTCGGTTCAAGGAGGCCTTCGACTTCCTTTAGCTGGTATCGCATCGCCGAGGCTTTTGATGTGTAGCGCATCGATGGGTGCAGAAGGTTCGGTAACACTTCAATTACGAGAGGCAGTCGAAGCGCCCGATTCAAGTGGACAATCTGACACAACCGCACTGACTATCGGCTATCCAGAGACAGATCTTTTAGCTGACATACAAGGATCAATACAGGCTACAGTCGGTAGCGTAGTCAATAAAAGCTCGGTGCAAAGCAATGGAACCGTTACCGTTACAACCGTGCCAGTCACAACGACCAATGGCATTGGCAACGGAAACACCAACAGCAACGTGAATCGTAGCCAATCATCGAACTCAAATGCCAAAGAAAATGTGGTTGCAACTGCTCCaaacacaacagcaacaacaacagcagcatcagcaacagcagcaacagcagtaacAGTGAAAAAATCCAGGCCGAAAACATCATCACCAACACGACATGTTGGACCCCAACAATGCCAAGTTTGCAGTAAAGTGTTCGGGAATGCGTCCGCGCTGGCAAAACATAAGCTTACTCATAGTGATGAacgaaaatatgtgtgtggCATGTGTTCAAAAGCATTTAAACGACAAGACCATTTAAACGGTCATATGCTGACTCATCGTAATAAAAAGCCATACGAGTGCAAGGCAGAAGGTTGTGGTAAATCCTATTGCGACGCAAGATCGCTAAGACGACACACCGAGAATCATCACAGTACGGTAGCAACGACGCCAACCACCCCAACCCAATCGATTTCATCAACCGGTCCACTTGGTGGTCTGAGTTTGTCGCCAGCAACCGCAAGCGGTGATGCAAGCTCTCCGCATGGCTCTAATTGTTTGCAGTTTAATGGTAATGGTGTGGGAGGAGATGGATCGAAATCGTCGTCGCCGAGCTTACCAGCTGCTACAAGTAATGAGGGACTTTCACGTCAGCAGCTTGATCTCATTAGTCAGATTATGcaacaaaccaaaccgaacaTGAGTCTGACTTCAGTCAACCAacaaaatggtcaaaaatcCATTCCGCGCCCAAGAACCTGGAACATTCAGACACAActgcaacaaaatcaaacgaaaactGACGTGGATACGGTAAACAGAACATCGAATGCGTCTACAACACCACAATCAGCCGCTGCGAACGCGGTGAAAACGGAGCAAAAACCCGTTGAATGCAATTTGTGCCATCGAAAGTTTAAAAATATACCCGCTCTAAATGGTCACATGCGATTGCATGGCGGATACTTTAAGAAAGATGCTGAAGcgaaaaaatgtgataaaaaagAGACACCTGGACCACCATTGCAGACTGCAAGCGTTGGCATTCGGGCGCTGATCGAAGAGAAAATCATTAGCAAGCGAGGAAAAGACATACTCAAAAATTCATTTGCCGTACCTGCGCCGCCGACATTATCACGACGATTAATCGATGCGGATAATTTTGTTACAGCAAAAACTCTGACAACAACGAATGTTGTTACGCCAAATCATGTGGCAAATACCACCAGTTCGATTCCTGTGTGCCAAACGACAACCATGACAAATATGACCCCAACGACAATTGCCAAGAATTCCATTGAGACGAAAGATGCCACGCTTATCGAACTACTGAAACGCGGCACAAAAGTGGCAgtcaaatgcaattcaaacgATCCACATGGCAGCACTCTGACATTCAAACCAAACCCCACGCAATCAGCAACTGTCCTATTGCCATCGAATGTGTCCGTTTCGTCACCAGTTACACCGACCACCAGCCCATTGGCCATCTCATTGTCAAATAATTCCGTAAAAAACACTCCACTTGCGCTCACCATTTCCCAAAATGCAAACGGATCCAGCGATGTGTACACATTGGCCTACTCAACGGGTTCCACATCAACGTTCTTCAATGAAAACGATGTGTACAATGTACCCGACACAGCGATGCTTCTGCAAGCCGTCGATTCCATTCAGCTTTTACAAAATTCCACCGCATCATCACAGCTTGGTGACATTTCAACAATTGGTGAATACGCTTTGGCCGACGGTAGCGATTTAAGCGATGCTAATCTGTTGTCACAGTACACACCATCTCGGCAACTGCAAGCCGTGCTCAATTCACCGTTGCCCGAAAGTTTGGCCGAATTTAGCGCACTTCATTCCAAGGATTTCGTACTGTATGGCACCGAAAGTGAAAACGATGATTCGCCCACGGCACAAACATCCAATTCACCATTGCCTACATCACCACTGTCGTATCCAACACCGCCAGCCAGCCACGAGGGAATCACACAATCATCACCGTTTCTCGATGATACGCATCATTTTGGTGATGCCAATTCAATCTTcgacgagaagaaaaacatcaGTTTTCTCGATGAAAATGGACTGTTCAAAGACATTAAAGACTCACGGCTCAGCGATTGCGAGCAAATTTTAAAACTAAAACATGAGCTTTTCAACGACTCCAAAGTTGTTATGGACGACACATTGTACTTTAAGAGTGAGGTCAAACATGAATACGATTCCAAGGGTGATCTCTCTGATGCAAACAATCACACCAACAATATCGACGAGTTCAATCAAAATCTGTCGTTCCTTGATGAGTCCCGAAATTTCCTCGAAGATAGCCGTAATCCGTCGTCACCGTTGTCAGCCGCATTCTTCACCGGCACAATGTCTAGCGCCGAAGAGGTAAAAGAAGCGCTGCAAGAAGTGTTGCCCAACGAGAGTATCACATGTGAACAGAACAACGAtattgatctgtattatttacCATCGGCCGCTTTCCAATCGCAAATGATGCTCAACTCAGACGATCCGCTGCTGTCATCTTCACCGAAAGATTTTATCATCAAACATCCCatcaatcgattcgaattcGATTCCGGTTCAAGTGCAAAGAAGCCAAAATTGGATGCTGGAATCAATGTggttgaaaaaagtaaaatactaatcacaaatcaaagcGACAAAATGTCAAACGAGACATTTTTGAGCCCGTCCAATTTGCCAATAAGTACGCAAGTGGCTGCAGCAGTTAGTAATAGCAACACCATTGAGTTTTCTCAGCCGCTTGCAAGAGAAACGCAGCAATGCTTAATGAAAACTCCACACGTGAATGTTCGACGAAATGTTGTGTATAAATCGATTTTACGAAAATCCTCCGCTCCATACTACACCCCATCGCCCATCCTCGATCCGAAACGAAACTCACCCGGTTTGTATGCGGAAATATCGAAAGATGCCACCACCGAGGATATGATTGACTTTGAATTTGCCGAAAGTGCATGTGTTCCGGAGTTTAGCCGGAAATTTAAAGTAAATATTGGTTCGGATTTCCAAGCCATAATTCCGTCAGCGGAACTGAAAACCGGTTACGAATGGAGCGAGGAAAAAGAGCGTGAACAATTGTTGTGGAAACCAAACGTTTTGCAAAATGACAAGCAAATTCAGCGTTTTGTCGAGCTGGCCAAATCGAGTGCGGTGCCATTGGTGTGCCACTCCGAGGAGATGGCATTGAAGGCGTTACACGATGCAAATGGTGACATtccaaatgcaattttgaaaatgttacaAGAACCACCGTCATCCATTCACAATCGATGGCAACCACAAGAAGTCGAAACTTTTCTTAATGGCCTCGAAATGCACGGAAAAAACTTTTATAAAATTTCCAAAGAGATTCCATCGAAAACGACTGGCAACTGTGTACAATTCTactatttttggaaaaagCTTTGCGTTCACTACAAAAGCACACATCTAAGTTCCGAACTCAATTCTACCATGGATGGACACTCTCCAAATGTAATAAATCAACAAGAATCTCGCCCGCATGTCTGCGAAATGCCGGATTGCTCAGCCAGCTTCACATCAAAAGCAGCGCTGCACGGTCACACACGAATTCATTGCATTGGGCGGAGTACAAGCACATTTTCATCCAGCACGGCCAATGGACAAAGTTTGTCAGGATATTTAATAAAGTGA
- Protein Sequence
- MAAVNSVQGGLRLPLAGIASPRLLMCSASMGAEGSVTLQLREAVEAPDSSGQSDTTALTIGYPETDLLADIQGSIQATVGSVVNKSSVQSNGTVTVTTVPVTTTNGIGNGNTNSNVNRSQSSNSNAKENVVATAPNTTATTTAASATAATAVTVKKSRPKTSSPTRHVGPQQCQVCSKVFGNASALAKHKLTHSDERKYVCGMCSKAFKRQDHLNGHMLTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHSTVATTPTTPTQSISSTGPLGGLSLSPATASGDASSPHGSNCLQFNGNGVGGDGSKSSSPSLPAATSNEGLSRQQLDLISQIMQQTKPNMSLTSVNQQNGQKSIPRPRTWNIQTQLQQNQTKTDVDTVNRTSNASTTPQSAAANAVKTEQKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDAEAKKCDKKETPGPPLQTASVGIRALIEEKIISKRGKDILKNSFAVPAPPTLSRRLIDADNFVTAKTLTTTNVVTPNHVANTTSSIPVCQTTTMTNMTPTTIAKNSIETKDATLIELLKRGTKVAVKCNSNDPHGSTLTFKPNPTQSATVLLPSNVSVSSPVTPTTSPLAISLSNNSVKNTPLALTISQNANGSSDVYTLAYSTGSTSTFFNENDVYNVPDTAMLLQAVDSIQLLQNSTASSQLGDISTIGEYALADGSDLSDANLLSQYTPSRQLQAVLNSPLPESLAEFSALHSKDFVLYGTESENDDSPTAQTSNSPLPTSPLSYPTPPASHEGITQSSPFLDDTHHFGDANSIFDEKKNISFLDENGLFKDIKDSRLSDCEQILKLKHELFNDSKVVMDDTLYFKSEVKHEYDSKGDLSDANNHTNNIDEFNQNLSFLDESRNFLEDSRNPSSPLSAAFFTGTMSSAEEVKEALQEVLPNESITCEQNNDIDLYYLPSAAFQSQMMLNSDDPLLSSSPKDFIIKHPINRFEFDSGSSAKKPKLDAGINVVEKSKILITNQSDKMSNETFLSPSNLPISTQVAAAVSNSNTIEFSQPLARETQQCLMKTPHVNVRRNVVYKSILRKSSAPYYTPSPILDPKRNSPGLYAEISKDATTEDMIDFEFAESACVPEFSRKFKVNIGSDFQAIIPSAELKTGYEWSEEKEREQLLWKPNVLQNDKQIQRFVELAKSSAVPLVCHSEEMALKALHDANGDIPNAILKMLQEPPSSIHNRWQPQEVETFLNGLEMHGKNFYKISKEIPSKTTGNCVQFYYFWKKLCVHYKSTHLSSELNSTMDGHSPNVINQQESRPHVCEMPDCSASFTSKAALHGHTRIHCIGRSTSTFSSSTANGQSLSGYLIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01351156;
- 90% Identity
- iTF_01351156;
- 80% Identity
- iTF_01351156;