Basic Information

Gene Symbol
NCOR1
Assembly
GCA_009176505.1
Location
VUAH01000001.1:795178-873249[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.3e-07 0.00032 20.9 0.0 3 43 474 514 473 516 0.97
2 2 1.7e-06 0.0024 18.1 0.0 5 45 979 1018 976 1019 0.94

Sequence Information

Coding Sequence
ATGGAAGCGGCTATACGTTCAGTTCAGGTTGGCCAGCGGGCTGACACTGCGTCATCTCAACCACCAGCATCCATTTCGTATCAACAGAGAATACCATCTGGAGCATCACCAATCCATAGGCCTGTCGACACACCCCAACCATATAGCAAAGGACCACAGCCAACCCCAGCTGCATCACCTCAATCTTACAGAGTTCCAGCTCGAGAAGCGCCGATTAGATATGTTCAACAAAATCCATATGGAACAATGCAGACTTTTCGGGAAGCCCCATATGTACGCGTACCACAAGTGCCACAACAAGTTGAATATCGATCGGCTCCGATTTCAGTTCCAGCAAATATATCAATATCTCATGGTTTACCACCAACCAGTACGATTGAAACGGTTGCAAACAATGCATCGAATAGACCCCGCATCTCGCTGTTGCCTGAAGATCGACGAATTCCAAGTGAATACTTGCCGGGCCGGCCACAACAAGCTGCTCCACCAGATCCTGGTGGACCGCCTGCATTTAAGAAAATTCGGCTCACCGAAAATCATTCACAATCACCGCCTCCTCTGCTGAAAGTCGATGTCCGAGATCCACCATCGACTGGTGCCTATCATCCGCAAGTGGAAGCCATATCGCCAACACCGCCAAACGATCCATCGGAAGAGCTGCGCGCCACCAAGGATGAGCTACTACAGAAAATCACAAAAGTGGATATGGAAATAAATAAGGCTGAAAAGACAATAGCAATGCTAAAAACAAAGCAGGCGTCACTCGAGGAGACCACCTCGAAACCGGCCAAAgccgaagaaaaacaagaagtACAACCGAAACATCGGAGTTTAGCGCAGAAAATTTATGCCGATAATCGAAAGAAAGCGAATGCGGCACATCAACAGATGGCAACGCTAGGCCCACCAGTCGAATTGCCTTTGTACAATCAACCATCGGACGTAGAAATTTGTAAAGAAATTATCCAACGGCATCAGTCGTTTAAATCTAGGcttttattgcatttgaagAAACTTAAGTCTGAACGAGCAGCTAAAGACCAGGCACTGGTGGAAAAGTATTCGATATTGTCGCAGGAGTGGCTGCGTCGcgtcgaaaaaatcgaatcgagtGCAAAGCGAAAGGCGAAAGATGCGAAAAATAgggaattttttgaaaaagtcTTTACCGAATTACGGAAACAGCGTGAAGATAAGGAGCGATTCAATCGCGTCGGTTCACGCATCAAGTCGGAAGCTGACGTAGAGGAAATCATTGACGGGCTACAAGAACAGGCAAACGAAGACAAGAAAATGCGCTCGTATGCAGTTATTCCGCCACTGATGCTAGACGCTAAACAGAAGCGATACGTatttcacaatgaaaatggaGCCGTCACCGAAATGGAAAACGACTTCAAGGATCGGAAGAACTTGAATGTGTGGACAACCGGCGAAAAGGAAATTTTCAAAGAGAAATTTCTGCAACATCCGAAAAACTTTGGCGCCATTGCTGCTAGTCTGGATCGGAAGAGTGCACAAGATTGTGTGCGATACTACTACCTCagcaaaaaaacagaaaattataAACAATTGTTGCGAAAATCTCGTCAACGAACGCGAAGCTCCCGTAATCCAAACAAATCCAATCATACTCAATCTCAAAGCATTGTCGATGCAATGACAACTGGAGTAACAACGAGATTGCAacgtgaacaacaacaaaagactGGTGCTCGTGCGACGAATTCAGCAAATATAACGCCACCACAAGTAACAACAGGCTCGACAACACCTCCGAATTCATTGCCATCTCAGTTTACGCCTCAAGTGCGCTGCCCTCCAGCCGAAAGCACAGCATCGACGATAGACTCAACCAACAATGTGGCTGATTCACCATCAACTGCATCAACAACGACAAATAATGTGAATGAAAGTGAAACGGTGTCAGTATCAGCTAAAGCCGGTGACACTGATAGCAGTGTGAAAAGCATGGATGTTGacattgataaaaatgatgaaaccGTTCGAGAGAAAACTGAGGGCACAGCAGCGAACACAACCCATTCTAGCTCACCAAGCGCGTTGCCAGCAGATGGCACGGCCTCAAGCGCAAACAATAGTGGAAATCCAGCCCAGACAATGGTTGCCGCCCCAACGACATCTGCCGCATCGAATACCAACTGCGCGAGCATTGTGAATACCGTAAATGGAGTAAAAACGGAAATCGTTACATCGTTGGCGAATAAAGCGACCGCATCGAATGCAACGTCGAACGAGAACGCACCACATTTGAATAACACAAATCAAGCGTCAGCCGTGGCGGCGGCACCAACGAACCCATCACCATCGTCatcttcatcgtcatcgtcatcatcgtcgtcgtcgtctgcATCATCCGAAAATGATACCGTGAAATtagagaacaacaacaaggcTGTGGATACAAGTGTATCATCTGCTGTGAATACTGTTGCATCCAATGCAaacgaagaagatgaaaaattagACGAAAGtGAGGCAAAGAAGCGACGAAAAGATACATCCGAATCAACCGAGGACGATACAACCGTTGATAGCAAAGATAAATTGCATCCGTGTTTCGTGTGCAAGGAGGAGAATTGTATGCGAACGCGACCATTGGAGAAGGGTCGTGGTCAACAGTACGGTATATCGGATGATGCAATTCCGGCCGGTGCTCGTGTTTGCAATACATGCCAATGTAAATCGGTGCGAAATCGGTATCCCAGCTGTCCACTGCCAACGTGTCCAAATCCCAAAGATCGTGTCAAACGATTTAGAAACTTACCGTCTCGACTATTCGAACTGGCACCGGAAATTCGTGAACCAATCGTGCAAGAATTTCAAATACCACCAAACGTTACGAAATGTTGTTCGGCttgtttgataaaaataaaacggaaattGGGTCCGCATTTGCTTGGCACAAATTTAACCGACGAAGAAATTgccaaattcaaaacattgcTGCAAGACGTCGGACCAAAATGGTCACAACTGGCCGAAACATTGGGCAAAACAGCGGTTGCGCTAAAAAGTTTTTACTTTCATTACAAGAAAAAGTActcgtttgatttggctgtGACTGAATACTATAAAACGCATCCGAGTGAGGAGCGTCGCGCTGCAATTACCGACGGTGATGAATCGGATTTGAGCACATCGTCATGCGATGAAAATGAGGGTGGCAGTGATACGGCATCCGTTGAAAGTCCCAAAACTACATTGAACACACAAACATCGTTATCGTCTGTGTCGAGCATAACAATCAAGAAGGAAGAGTCATCGGAATCAACAACGCCCGCCACAAATACAGATGATCGATTATTGCCGCCGGTTGCACAGCCACCGCGAAAGCAAAAAGTCGAAGAATACGATAGTTCAGCCACTGAAACGGCTGACGAAGAGAATGAAGCTTCGCCAGGCAATCGACACAGTCCAAAGGTGTTGCTTTATCCGAATCAAACAACAATTACCATGGTCCCGTCGTCAGTACAGAATGGACCACGCGAAATGATCAATCCAGAAATGACAAATGTTCGCGATGTTATGTTGAATGTGATAGAACGATCGCTGAAGACCAACCAACAGCCACCACCGAAACCAGCCATTTCCAAACCGAGTGTCCTCGATTCAAGGGCTGATATCACGTTTGTGCACGAATACCGAAACGACATCGGAAAACCACATCATATTTCAAGCATGGCAAACGTCACACAACCAACCGCACTGCCACGATCATCGAATCAAGAAGGATTGGCCACACTCTCTGTGGTGAATTCACACGGTCATTCGCAACAGGTGATGTCGCATCCACATTCGATTTCCAGTCAAATTGCCGCAACCATAACGCCCGTGCAAAGCCAAACAACGGcatcgaatcaaaatcaatcgtTAGCGGTACCAAAGTCCACCGTTCATGATGCTCAAAAAGAAAGTGTTGTGGTGTATTCGCGTGCCGAGGAGCCGCAAACACTTGATCTCAGCATCAAAAAACCGGTACGTGACAACTTCCCTCCGCCCGCTCACTCGAAACCAATTCCAGGCAGTAGCGTTACCATGTATCGCAGCGATCCACATGCACATGCCCAAACGCCACCATCAATTATCAACCCGAATCCAAACTACTTGAGTGCAATGTATGACCACAATCGACCATCGAAATCACCATCCATATTCATGTCAACAGTTCCAACGTCGATGCCAATATCACAACAACCACTCAATGCACAGCATAGCATTCAGAATATGCGTGTCCATCAGAATCCATCGATCCATTCTCAAGTGTCACAACAGGCGTCGGCTGCTTCACAGTCGAAATCGAAAACTGCACCAAAACTCAGTCCAAAGGTTACACAGCATCCCTCTAACAATCAACCAAGCGGTCACAAAGGTTCCATAACACACGGAACACCAGtaaattcaaacaatcaaCAGATTCTGATCCAAGGCCCAGCTACGCTGAGTCCACGATTTGATGGCATTCTACGGCAAACGCCACCATCTGGCGATAAACTCGGTTCAATCACCCAAGGAACACCAGTACATTTACCGCCACATCATTTGACCGACAAAGCACGAGTCTATGATTACTACAAGAACAGTCGACAGAGCCCGGCTCAACATCAGCCACCGCAACAACCATCACCGCAAGCAGGCACATTTGGTTCGCCATATCAAGTGCGACCATCCGGCCCGTATGCCATCGAACAGCCAACTCAGTTGAGCTCACGTCAAATAATCATGAACGATTTCATCACTTCCCAACAAATGCACGGTCAACAGTCTCGTGGACGTTCTGACAAAGAATCACCGTCACCGCGAAGCGCAAACGTCGCAGGTTCACCAGCTTCGTTATACTACGCGGAAAAggaacaacaacgacaacgtgCTGAATACCTCAGCCGAGCATCACCAGCCGAACACATTAATAGTACTCCAAGCCCACACagaacaccaccaccacagcGTCAGGGAGTGATCCAGCGTCACAATACCGGTGGTTCAAAGCCTCCAAGCCCGGCACCAAATCGTTTACATATTATACCACAACACCATTATGCAATGCCAGGTCATGAAGCGTTCTCTTCATTGGTCGATGTAGCAGTTCAACAACCATTGCTGCCAGTTCCTCACAAAGAAGAGAAGCGATCAAATGTTCCTGTTAGTGAGCCATCACAACATCATGAGCTCCGTTTTCATCCTCATCCTCATCAATTAGCTGCTGCTCACGAGCAAATGGCGATGAtccatcaacaacaaatgcgAGCTGAAATGCAAAGAAGACACATTCAACAACAGgaaagagaaagagtagACCGTGAGCGTgagcaaagagaaagagaacgtgAACGTGAGCGTCACCATCAAGATCGAATGGAGCGTGAAAGACGTGAAGACCAATATCGACAGcGGTCGGGTGATCGTTGGAAGTCACCGGAACGAGAACGTGCTGAGCGTGAAAGAGAACAAATTGTATTGGAAGCACAAGAACATGAACGAAGACGCTTGGtcaatgctgctgctgctgctgctgctgcagctgCTAGCAACCATCCATTTATTCGAGATGGACAAAATATTCCGCGTGATAACCGAACCGGTAGACCAGATGGTAATCTAACTGCTGCAAGTCTAATCGATGCAATAATTActcatcaaataaatcaaacagCAAATGATCCTCCGGTGTTGCGAGACGGTCATCGTCCACCATTTTTTCCTGGTGGCAGAGATTTACATCAagaaaataatggaaaatcacATTCGCCGAATGTGATCAACATCGATTTGGATTCGGATCGTCGAAATCCAGTTTTGACAAAGAGCATAACGCTTGGCGAACTAACGGATTCGATCATTGCTAAGGATTACAGTCCAAACCCGTTTCTGCCGTTGCGACAAACGGCATTCATGCAGTATCGTCCCGATCAAGCCGAAATCTGGAAAATGAACCGTCGGCTATCGCAAAAGGATGGAATCCCAGCGCCACAGGCACAACCTCAATCTCAATTGCCGCCACCACAATCGCATAATCAGGGCAAGCCATCGTCAAACTCAAAACTGGCATTGCACGAGATAAACAGTAGTGCACGATCGGCGAGTCCACGCACCACCAAAGCATACCATGAATCGATAACACCTCCCGAAAACTATCACTACAGTGTACCAGTGTCTGCCCATTCGCGCGTTCCAACCCAGCCGGGATCCGGTCATCAGTTCGCACTCGATTGCTATGTTAAAAACCGAATAGTCGAAGCGATGCGCACTGAAGAGACGGATAAACGAGGCGAAGACGTACCCGAACAGCAGCGTCGTACACCTCAAGAGCGACCAACACCATCTTCGTCTGTTCATCACAGCAAAGATATTGATCGCAGCTCCACACCTGGCGATATGGTCATTGATGAGGAGTCGCAAGCGCGCCCAGCATCGGGCACAGCAGATCGCAAAGAAAACTGGCCATCGTTCACATCGTCAACGTACGCGTATCCATTTAGTGCATTGAATGTGTCAAGTGCTGCGGCAAATTTACCGCCACCAATGAAATCGGCTCACGTTGAAAGTGATTCGGGATCAAGAAGTCAAGCACCACCACAAGAGCCAAAGCCCTTACTTTCCGCTCAATATGAAGCGCTCAGCGATGAAGACTAA
Protein Sequence
MEAAIRSVQVGQRADTASSQPPASISYQQRIPSGASPIHRPVDTPQPYSKGPQPTPAASPQSYRVPAREAPIRYVQQNPYGTMQTFREAPYVRVPQVPQQVEYRSAPISVPANISISHGLPPTSTIETVANNASNRPRISLLPEDRRIPSEYLPGRPQQAAPPDPGGPPAFKKIRLTENHSQSPPPLLKVDVRDPPSTGAYHPQVEAISPTPPNDPSEELRATKDELLQKITKVDMEINKAEKTIAMLKTKQASLEETTSKPAKAEEKQEVQPKHRSLAQKIYADNRKKANAAHQQMATLGPPVELPLYNQPSDVEICKEIIQRHQSFKSRLLLHLKKLKSERAAKDQALVEKYSILSQEWLRRVEKIESSAKRKAKDAKNREFFEKVFTELRKQREDKERFNRVGSRIKSEADVEEIIDGLQEQANEDKKMRSYAVIPPLMLDAKQKRYVFHNENGAVTEMENDFKDRKNLNVWTTGEKEIFKEKFLQHPKNFGAIAASLDRKSAQDCVRYYYLSKKTENYKQLLRKSRQRTRSSRNPNKSNHTQSQSIVDAMTTGVTTRLQREQQQKTGARATNSANITPPQVTTGSTTPPNSLPSQFTPQVRCPPAESTASTIDSTNNVADSPSTASTTTNNVNESETVSVSAKAGDTDSSVKSMDVDIDKNDETVREKTEGTAANTTHSSSPSALPADGTASSANNSGNPAQTMVAAPTTSAASNTNCASIVNTVNGVKTEIVTSLANKATASNATSNENAPHLNNTNQASAVAAAPTNPSPSSSSSSSSSSSSSSASSENDTVKLENNNKAVDTSVSSAVNTVASNANEEDEKLDESEAKKRRKDTSESTEDDTTVDSKDKLHPCFVCKEENCMRTRPLEKGRGQQYGISDDAIPAGARVCNTCQCKSVRNRYPSCPLPTCPNPKDRVKRFRNLPSRLFELAPEIREPIVQEFQIPPNVTKCCSACLIKIKRKLGPHLLGTNLTDEEIAKFKTLLQDVGPKWSQLAETLGKTAVALKSFYFHYKKKYSFDLAVTEYYKTHPSEERRAAITDGDESDLSTSSCDENEGGSDTASVESPKTTLNTQTSLSSVSSITIKKEESSESTTPATNTDDRLLPPVAQPPRKQKVEEYDSSATETADEENEASPGNRHSPKVLLYPNQTTITMVPSSVQNGPREMINPEMTNVRDVMLNVIERSLKTNQQPPPKPAISKPSVLDSRADITFVHEYRNDIGKPHHISSMANVTQPTALPRSSNQEGLATLSVVNSHGHSQQVMSHPHSISSQIAATITPVQSQTTASNQNQSLAVPKSTVHDAQKESVVVYSRAEEPQTLDLSIKKPVRDNFPPPAHSKPIPGSSVTMYRSDPHAHAQTPPSIINPNPNYLSAMYDHNRPSKSPSIFMSTVPTSMPISQQPLNAQHSIQNMRVHQNPSIHSQVSQQASAASQSKSKTAPKLSPKVTQHPSNNQPSGHKGSITHGTPVNSNNQQILIQGPATLSPRFDGILRQTPPSGDKLGSITQGTPVHLPPHHLTDKARVYDYYKNSRQSPAQHQPPQQPSPQAGTFGSPYQVRPSGPYAIEQPTQLSSRQIIMNDFITSQQMHGQQSRGRSDKESPSPRSANVAGSPASLYYAEKEQQRQRAEYLSRASPAEHINSTPSPHRTPPPQRQGVIQRHNTGGSKPPSPAPNRLHIIPQHHYAMPGHEAFSSLVDVAVQQPLLPVPHKEEKRSNVPVSEPSQHHELRFHPHPHQLAAAHEQMAMIHQQQMRAEMQRRHIQQQERERVDREREQRERERERERHHQDRMERERREDQYRQRSGDRWKSPERERAEREREQIVLEAQEHERRRLVNAAAAAAAAAASNHPFIRDGQNIPRDNRTGRPDGNLTAASLIDAIITHQINQTANDPPVLRDGHRPPFFPGGRDLHQENNGKSHSPNVINIDLDSDRRNPVLTKSITLGELTDSIIAKDYSPNPFLPLRQTAFMQYRPDQAEIWKMNRRLSQKDGIPAPQAQPQSQLPPPQSHNQGKPSSNSKLALHEINSSARSASPRTTKAYHESITPPENYHYSVPVSAHSRVPTQPGSGHQFALDCYVKNRIVEAMRTEETDKRGEDVPEQQRRTPQERPTPSSSVHHSKDIDRSSTPGDMVIDEESQARPASGTADRKENWPSFTSSTYAYPFSALNVSSAAANLPPPMKSAHVESDSGSRSQAPPQEPKPLLSAQYEALSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00367163;
90% Identity
-
80% Identity
-