Smos005041.1
Basic Information
- Insect
- Sitodiplosis mosellana
- Gene Symbol
- CDC5L_2
- Assembly
- GCA_009176505.1
- Location
- VUAH01006164.1:2129691-2131900[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-14 5.2e-11 42.6 1.6 4 46 11 54 8 54 0.95 2 2 2e-12 2.7e-09 37.1 0.0 1 45 60 103 60 104 0.93
Sequence Information
- Coding Sequence
- atGCCACGTATCATGATGAAAGGTGGTATTTGGCGGAATATTGAAGATGAAATATTGAAGGCAGCCGTTATGAAATATGGAAAAACTCAATGGTCCCGCGTATCATCACTGTTACATAGGAAATCTGCTGAACAATGCAAAGCACGTTGGCATGAGTGGCTGGATCCAAGTGTTAAGAAAACTGAATGGTCAAGAGACGAAGATGAACGACTACTTCACTTGGCCAAATTAATGCCAACGCAGTGGCGAACTATTGCACCGATGATCGGCAGAACTGCCGCTCAATGTTTGGACCGATATGAATACTTGTTGGATATGGCTCAAAAGAAGGATGAAGTCGAAGATAATCCACTAAAATTGAAACCGGGTGTAATCGATCCAAATCCAGAGACTAAACCGGCAAGGTATGATGCAAAAGATATGGATGGAGATGAGTTAGAGATGTTATCTGAAGCAAGAGCACGCTTAGCGAATACACAAGGCAAAAAGATCAAACGAAAATCACGAGAAAAACTTTTGGACGAGGCCAAACGTTTGGCCAAGTTACAGAAGATGCGAGAATTACGTGCGGCTGGCATGGGTGGTGATGGTGATCGTCGCAAAACCAAAGGCTTGGACTGTAATGCTGAGAtaccatttgaaaaatcaCCTGCTCCCGGATTCTACGATACTTCTGAAGAGCATATTAGAAGGAATCCATTcaatttccacaaaatccGTCAACAAGATCTAGACGGCGAGCTACGTACCGAAAGAGAAAAGgatgaacgagcaaaaaataaagcgaaattacagaagaaaaatgatatgaCCAGGCTACCTAACAATTTTTCGGAATCAGCTAAAAAACGTTCGTGTTTGCCGCGTTCGAAACTAATTTTGCCCGAGCCACAAATATCCGATCAAGATATGCAGCAAGTCATTAAACTGGGAAAAGTGACTGATATGGCCAGAGAAGTAGCCTTGGAATGTGACATTGAAACGACTCATGCTCTGCTGAGTGAGTATGGCATTACTCGGCAAGTAACATCAACAACTCGTCCACCAGCAACGATGAATGATCGAGTCATGCAAGAAGCACAAACCATTGTTGCATTAACACATGTTGATACTCCATTGATGGGCGGAGAAAATACTCCATTGCAATATACCGATTTTCCatccgacaaaaaaaaatacaaaaaaaatcaggtTCACAATCCGTTGCTAAGACGAGATCAATTGAACATAAATAACGACCAATTTGATTGCAAATCGGCAATAGTAACGAGGAGATATGAGAAGAAAGTAAGAGAATCACTTCGTGAAAAACTTTTGTCTTTGCCCCTTCCGCGAAATGACTATGAAATCATTGTGCCCGAAGAAAATATGGATGAAGACACAAATTAG
- Protein Sequence
- MPRIMMKGGIWRNIEDEILKAAVMKYGKTQWSRVSSLLHRKSAEQCKARWHEWLDPSVKKTEWSRDEDERLLHLAKLMPTQWRTIAPMIGRTAAQCLDRYEYLLDMAQKKDEVEDNPLKLKPGVIDPNPETKPARYDAKDMDGDELEMLSEARARLANTQGKKIKRKSREKLLDEAKRLAKLQKMRELRAAGMGGDGDRRKTKGLDCNAEIPFEKSPAPGFYDTSEEHIRRNPFNFHKIRQQDLDGELRTEREKDERAKNKAKLQKKNDMTRLPNNFSESAKKRSCLPRSKLILPEPQISDQDMQQVIKLGKVTDMAREVALECDIETTHALLSEYGITRQVTSTTRPPATMNDRVMQEAQTIVALTHVDTPLMGGENTPLQYTDFPSDKKKYKKNQVHNPLLRRDQLNINNDQFDCKSAIVTRRYEKKVRESLREKLLSLPLPRNDYEIIVPEENMDEDTN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -